AT3G62980 : AtTIR1
Query Information
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AGICode AT3G62980
Description F-box/RNI-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G62980 F-box/RNI-like superfamily protein AtTIR1, TRANSPORT INHIBITOR
RESPONSE 1		 1 0.28 -0.35
2 AT5G63190 MA3 domain-containing protein 0.8 0.32 -0.29
3 AT5G02150 Fes1C Fes1C 0.74 0.31 -0.31
4 AT1G51890 Leucine-rich repeat protein kinase family protein -0.73 0.33 -0.3
5 AT3G20310 ethylene response factor 7 ATERF-7, ATERF7, ethylene response
factor 7		 0.73 0.32 -0.34
6 AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein AKINBETA1 0.72 0.32 -0.33
7 AT5G44570 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, hypocotyl,
sepal, flower, leaf; EXPRESSED DURING: petal
differentiation and expansion stage, LP.08 eight leaves
visible; Has 7 Blast hits to 7 proteins in 2 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.3 -0.32
8 AT4G35180 LYS/HIS transporter 7 LYS/HIS transporter 7 -0.7 0.32 -0.32
9 AT2G06150 transposable element gene -0.69 0.33 -0.32
10 AT2G27660 Cysteine/Histidine-rich C1 domain family protein -0.69 0.34 -0.31
11 AT2G25900 Zinc finger C-x8-C-x5-C-x3-H type family protein ATCTH, A. THALIANA TANDEM ZINC
FINGER PROTEIN 1		 0.67 0.3 -0.3
12 AT1G61800 glucose-6-phosphate/phosphate translocator 2 ARABIDOPSIS
GLUCOSE-6-PHOSPHATE/PHOSPHATE
TRANSLOCATOR 2,
glucose-6-phosphate/phosphate
translocator 2		 -0.67 0.34 -0.29
13 AT3G51110 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.32 -0.34
14 AT5G16110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast
hits to 133 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.32 -0.3
15 AT1G51850 Leucine-rich repeat protein kinase family protein -0.66 0.31 -0.29
16 AT1G33660 peroxidase family protein -0.66 0.31 -0.31
17 AT1G51800 Leucine-rich repeat protein kinase family protein IMPAIRED OOMYCETE SUSCEPTIBILITY 1 -0.66 0.32 -0.31
18 AT4G23200 cysteine-rich RLK (RECEPTOR-like protein kinase) 12 cysteine-rich RLK (RECEPTOR-like
protein kinase) 12		 -0.65 0.32 -0.31
19 AT1G16420 metacaspase 8 ARABIDOPSIS THALIANA METACASPASE
8, metacaspase 2e, metacaspase 8,
metacaspase 2e		 -0.65 0.31 -0.33
20 AT5G10860 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 3 0.65 0.31 -0.33
21 AT2G17880 Chaperone DnaJ-domain superfamily protein 0.65 0.3 -0.31
22 AT5G23080 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 TOUGH 0.65 0.32 -0.32
23 AT2G32710 Cyclin-dependent kinase inhibitor family protein CYCLIN-DEPENDENT KINASE INHIBITOR
2, INTERACTORS OF CDC2 KINASE 7,
KRP4, KIP-RELATED PROTEIN 4		 0.65 0.29 -0.31
24 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 0.64 0.3 -0.32
25 AT5G24610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.64 0.34 -0.33
26 AT2G18420 Gibberellin-regulated family protein -0.64 0.31 -0.3
27 AT5G11920 6-&1-fructan exohydrolase 6-&1-fructan exohydrolase,
6-&1-fructan exohydrolase		 -0.64 0.32 -0.32
28 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 0.64 0.3 -0.31
29 AT1G79700 Integrase-type DNA-binding superfamily protein 0.63 0.32 -0.3
30 AT4G19520 disease resistance protein (TIR-NBS-LRR class) family -0.63 0.32 -0.32
31 AT2G47700 RING/U-box superfamily protein RED AND FAR-RED INSENSITIVE 2 0.63 0.31 -0.31
32 AT3G19860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 121 0.63 0.3 -0.32
33 AT1G68650 Uncharacterized protein family (UPF0016) -0.63 0.31 -0.31
34 AT3G47480 Calcium-binding EF-hand family protein -0.63 0.31 -0.31
35 AT3G62950 Thioredoxin superfamily protein 0.62 0.34 -0.33
36 AT3G46280 protein kinase-related -0.62 0.31 -0.33
37 AT5G53110 RING/U-box superfamily protein -0.62 0.31 -0.29
38 AT2G14020 transposable element gene -0.62 0.33 -0.33
39 AT3G10770 Single-stranded nucleic acid binding R3H protein 0.62 0.33 -0.31
40 AT4G26200 1-amino-cyclopropane-1-carboxylate synthase 7 1-amino-cyclopropane-1-carboxylate
synthase 7, ATACS7		 -0.62 0.33 -0.31
41 AT2G06510 replication protein A 1A ARABIDOPSIS THALIANA REPLICATION
PROTEIN A 1A, ARABIDOPSIS THALIANA
RPA70-KDA SUBUNIT A, replication
protein A 1A, RPA70-KDA SUBUNIT A		 0.62 0.33 -0.29
42 AT3G01490 Protein kinase superfamily protein 0.62 0.3 -0.3
43 AT1G51790 Leucine-rich repeat protein kinase family protein -0.62 0.31 -0.33
44 AT5G67090 Subtilisin-like serine endopeptidase family protein -0.62 0.31 -0.33
45 AT1G67780 Zinc-finger domain of monoamine-oxidase A repressor R1
protein		 0.61 0.31 -0.33
46 AT3G11730 Ras-related small GTP-binding family protein ATFP8, ARABIDOPSIS THALIANA RAB
GTPASE HOMOLOG D1, RAB GTPASE
HOMOLOG D1		 0.61 0.32 -0.31
47 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 0.61 0.32 -0.3
48 AT5G02780 glutathione transferase lambda 1 glutathione transferase lambda 1 -0.61 0.32 -0.31
49 AT1G07890 ascorbate peroxidase 1 ascorbate peroxidase 1, ATAPX01,
ATAPX1, CS1, maternal effect
embryo arrest 6		 -0.6 0.3 -0.31
50 AT3G14020 nuclear factor Y, subunit A6 nuclear factor Y, subunit A6 -0.6 0.31 -0.3
51 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 0.6 0.31 -0.32
52 AT4G39830 Cupredoxin superfamily protein -0.6 0.33 -0.32
53 AT4G11170 Disease resistance protein (TIR-NBS-LRR class) family -0.6 0.31 -0.33
54 AT1G52740 histone H2A protein 9 histone H2A protein 9 0.6 0.33 -0.32
55 AT1G13450 Homeodomain-like superfamily protein GT-1 0.6 0.31 -0.32
56 AT4G23260 cysteine-rich RLK (RECEPTOR-like protein kinase) 18 cysteine-rich RLK (RECEPTOR-like
protein kinase) 18		 -0.6 0.34 -0.3
57 AT4G35660 Arabidopsis protein of unknown function (DUF241) 0.59 0.32 -0.32
58 AT1G74400 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.31 -0.32
59 AT4G23210 cysteine-rich RLK (RECEPTOR-like protein kinase) 13 cysteine-rich RLK (RECEPTOR-like
protein kinase) 13		 -0.59 0.3 -0.31
60 AT3G16530 Legume lectin family protein -0.59 0.3 -0.34
61 AT2G01980 sodium proton exchanger, putative (NHX7) (SOS1) ARABIDOPSIS NA+/H+ ANTIPORTER 7,
ARABIDOPSIS SALT OVERLY SENSITIVE
1, SALT OVERLY SENSITIVE 1		 -0.59 0.32 -0.3
62 AT5G61160 anthocyanin 5-aromatic acyltransferase 1 anthocyanin 5-aromatic
acyltransferase 1		 -0.59 0.33 -0.32
63 AT2G04070 MATE efflux family protein -0.59 0.31 -0.31
64 AT1G43910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.32 -0.31
65 AT4G27060 ARM repeat superfamily protein CONVOLUTA, SPIRAL 2, TORTIFOLIA 1 0.59 0.32 -0.31
66 AT1G50640 ethylene responsive element binding factor 3 ATERF3, ethylene responsive
element binding factor 3		 0.59 0.31 -0.32
67 AT5G51090 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.29 -0.31
68 AT3G19380 plant U-box 25 plant U-box 25 0.58 0.33 -0.31
69 AT3G44340 clone eighty-four clone eighty-four -0.58 0.32 -0.31
70 AT5G43830 Aluminium induced protein with YGL and LRDR motifs 0.58 0.31 -0.31
71 AT5G60680 Protein of unknown function, DUF584 0.58 0.34 -0.3
72 AT3G27530 golgin candidate 6 golgin candidate 6, MAIGO 4 0.58 0.31 -0.31
73 AT5G16310 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 UCH1 0.58 0.32 -0.3
74 AT5G05950 maternal effect embryo arrest 60 maternal effect embryo arrest 60 0.58 0.32 -0.32
75 AT5G01550 lectin receptor kinase a4.1 lectin receptor kinase a4.1 -0.58 0.31 -0.33
76 AT2G43220 Cysteine/Histidine-rich C1 domain family protein 0.58 0.3 -0.32
77 AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein 0.57 0.32 -0.31
78 AT2G35720 DNAJ heat shock N-terminal domain-containing protein ORIENTATION UNDER VERY LOW
FLUENCES OF LIGHT 1		 -0.57 0.31 -0.32
79 AT5G63260 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.57 0.33 -0.33
80 AT1G64470 Ubiquitin-like superfamily protein 0.57 0.34 -0.29
81 AT4G20000 VQ motif-containing protein -0.57 0.32 -0.3
82 AT5G57950 26S proteasome regulatory subunit, putative -0.56 0.31 -0.3
83 AT5G10710 INVOLVED IN: chromosome segregation, cell division; LOCATED
IN: chromosome, centromeric region, nucleus; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O
(InterPro:IPR018464); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.56 0.31 -0.3
84 AT5G54510 Auxin-responsive GH3 family protein DWARF IN LIGHT 1, GH3.6 0.56 0.34 -0.31
85 AT1G06260 Cysteine proteinases superfamily protein -0.56 0.31 -0.32
86 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 -0.56 0.32 -0.32
87 AT4G31430 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
25 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.56 0.32 -0.31
88 AT1G66720 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.56 0.31 -0.32
89 AT1G03390 HXXXD-type acyl-transferase family protein 0.55 0.3 -0.29
90 AT4G27300 S-locus lectin protein kinase family protein -0.55 0.32 -0.34
91 AT1G35860 translocon outer membrane complex 75-I translocon outer membrane complex
75-I		 -0.55 0.33 -0.32
92 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 0.55 0.32 -0.32
93 AT3G15450 Aluminium induced protein with YGL and LRDR motifs 0.55 0.32 -0.31
94 AT3G17590 transcription regulatory protein SNF5, putative (BSH) BUSHY GROWTH, CHE1 0.55 0.32 -0.3
95 AT5G14540 Protein of unknown function (DUF1421) 0.55 0.34 -0.32
96 AT1G21830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF740 (InterPro:IPR008004); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.55 0.31 -0.32
97 AT3G06380 tubby-like protein 9 tubby-like protein 9, tubby-like
protein 9		 0.55 0.33 -0.3
98 AT2G37740 zinc-finger protein 10 ZINC-FINGER PROTEIN 10,
zinc-finger protein 10		 -0.55 0.32 -0.3
99 AT1G12910 Transducin/WD40 repeat-like superfamily protein ANTHOCYANIN11, LIGHT-REGULATED WD
1		 0.55 0.3 -0.28
100 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.31 -0.32
101 AT4G03450 Ankyrin repeat family protein -0.55 0.31 -0.31
102 AT1G62970 Chaperone DnaJ-domain superfamily protein 0.55 0.33 -0.31
103 AT3G16980 RNA polymerases M/15 Kd subunit NRPB9A, NRPD9A, NRPE9A 0.55 0.31 -0.3
104 AT5G15250 FTSH protease 6 ATFTSH6, FTSH protease 6 -0.54 0.3 -0.31
105 AT1G51660 mitogen-activated protein kinase kinase 4 ARABIDOPSIS THALIANA
MITOGEN-ACTIVATED PROTEIN KINASE
KINASE 4, ARABIDOPSIS THALIANA
MITOGEN-ACTIVATED PROTEIN KINASE
KINASE 4, mitogen-activated
protein kinase kinase 4		 -0.54 0.32 -0.32
106 AT3G28510 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.54 0.31 -0.33
107 AT2G29120 glutamate receptor 2.7 glutamate receptor 2.7, GLUTAMATE
RECEPTOR 2.7, glutamate receptor
2.7		 -0.54 0.32 -0.34
108 AT3G43210 ATP binding microtubule motor family protein ARABIDOPSIS NPK1-ACTIVATING
KINESIN 2, NPK1-ACTIVATING KINESIN
2, TETRASPORE		 0.54 0.33 -0.29
109 AT3G43330 transposable element gene 0.54 0.31 -0.32
110 AT1G08680 ARF GAP-like zinc finger-containing protein ZIGA4 ARF-GAP domain 14, ARF GAP-like
zinc finger-containing protein
ZIGA4		 0.54 0.33 -0.31
111 AT5G64110 Peroxidase superfamily protein 0.54 0.32 -0.3
112 AT5G53830 VQ motif-containing protein 0.54 0.33 -0.32
113 AT3G48185 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.53 0.33 -0.31
114 AT2G15420 myosin heavy chain-related -0.53 0.29 -0.3
115 AT3G15740 RING/U-box superfamily protein -0.53 0.31 -0.32
116 AT1G35320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30160.1); Has 9 Blast hits to
9 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.53 0.31 -0.31
117 AT3G57630 exostosin family protein -0.53 0.32 -0.31
118 AT4G33310 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.28 -0.3
119 AT3G07790 DGCR14-related 0.52 0.31 -0.31
120 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1		 -0.52 0.32 -0.31
121 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.31 -0.31
122 AT1G33475 SNARE-like superfamily protein 0.52 0.3 -0.33
123 AT2G10660 transposable element gene -0.52 0.31 -0.3
124 AT5G58520 Protein kinase superfamily protein 0.52 0.34 -0.32
125 AT3G52190 phosphate transporter traffic facilitator1 AtPHF1, phosphate transporter
traffic facilitator1		 -0.52 0.31 -0.33
126 AT1G64170 cation/H+ exchanger 16 cation/H+ exchanger 16, cation/H+
exchanger 16		 -0.52 0.32 -0.3
127 AT5G55090 mitogen-activated protein kinase kinase kinase 15 mitogen-activated protein kinase
kinase kinase 15		 -0.52 0.29 -0.33
128 AT1G57570 Mannose-binding lectin superfamily protein -0.51 0.32 -0.32
129 AT3G28580 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.51 0.32 -0.33
130 AT2G13810 AGD2-like defense response protein 1 AGD2-like defense response protein
1, eds two suppressor 5		 -0.51 0.32 -0.3
131 AT3G48640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF677
(InterPro:IPR007749); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF677)
(TAIR:AT5G66670.2); Has 42 Blast hits to 42 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.51 0.32 -0.33
132 AT5G39785 Protein of unknown function (DUF1666) -0.51 0.32 -0.34
133 AT3G52620 unknown protein; Has 11 Blast hits to 11 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.51 0.29 -0.31
134 AT5G25450 Cytochrome bd ubiquinol oxidase, 14kDa subunit -0.51 0.31 -0.31
135 AT3G04110 glutamate receptor 1.1 ATGLR1.1, GLUTAMATE RECEPTOR 1,
glutamate receptor 1.1		 -0.51 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
136 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		0.64 0.45 -0.44 C0073