AT3G62480 : -
Query Information
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AGICode AT3G62480
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G62480 transposable element gene 1 0.32 -0.31
2 AT1G44780 CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ
(InterPro:IPR019098); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G08310.1); Has 18105
Blast hits to 11200 proteins in 808 species: Archae - 37;
Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants -
674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI
BLink).		 -0.69 0.32 -0.33
3 AT3G06990 Cysteine/Histidine-rich C1 domain family protein -0.69 0.3 -0.32
4 AT1G64800 DNA binding;sequence-specific DNA binding transcription
factors		 -0.68 0.31 -0.33
5 AT5G38960 RmlC-like cupins superfamily protein -0.68 0.31 -0.32
6 AT5G26100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G44170.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.31 -0.31
7 AT2G16520 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: zinc
finger (C3HC4-type RING finger) family protein
(TAIR:AT3G45560.1); Has 72 Blast hits to 69 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.33 -0.33
8 AT3G22710 F-box family protein -0.61 0.31 -0.31
9 AT1G18485 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.32 -0.31
10 AT1G74480 RWP-RK domain-containing protein AtRKD2, RWP-RK domain containing 2 0.6 0.34 -0.3
11 AT2G30560 glycine-rich protein -0.6 0.33 -0.33
12 AT1G43320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 6 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.33
13 AT4G11270 Transducin/WD40 repeat-like superfamily protein -0.6 0.34 -0.31
14 AT5G27800 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 -0.59 0.31 -0.31
15 AT4G17610 tRNA/rRNA methyltransferase (SpoU) family protein -0.58 0.32 -0.31
16 AT1G54990 alpha/beta-Hydrolases superfamily protein AUXIN RESISTANT 4, REDUCED ROOT
GRAVITROPISM, REDUCED ROOT
GRAVITROPISM 1		 0.58 0.33 -0.34
17 AT4G38980 unknown protein; Has 44 Blast hits to 44 proteins in 19
species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 8;
Plants - 24; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.58 0.33 -0.3
18 AT4G01840 Ca2+ activated outward rectifying K+ channel 5 ATKCO5, ATTPK5, Ca2+ activated
outward rectifying K+ channel 5,
TPK5		 0.58 0.32 -0.31
19 AT3G12360 Ankyrin repeat family protein INCREASED TOLERANCE TO NACL 0.58 0.33 -0.3
20 AT1G73840 hydroxyproline-rich glycoprotein family protein ENHANCED SILENCING PHENOTYPE 1 -0.57 0.33 -0.31
21 AT1G67000 Protein kinase superfamily protein 0.56 0.31 -0.35
22 AT3G07890 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.56 0.31 -0.32
23 AT5G47010 RNA helicase, putative ATUPF1, LOW-LEVEL BETA-AMYLASE 1,
UPF1		 -0.55 0.29 -0.3
24 AT1G60130 Mannose-binding lectin superfamily protein -0.55 0.32 -0.32
25 AT3G54430 SHI-related sequence 6 SHI-related sequence 6 -0.55 0.31 -0.32
26 AT2G24340 sequence-specific DNA binding transcription factors 0.54 0.31 -0.31
27 AT2G38180 SGNH hydrolase-type esterase superfamily protein -0.54 0.32 -0.31
28 AT2G40410 Staphylococcal nuclease homologue 0.54 0.34 -0.31
29 AT4G18350 nine-cis-epoxycarotenoid dioxygenase 2 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 2,
nine-cis-epoxycarotenoid
dioxygenase 2		 0.54 0.32 -0.34
30 AT5G55780 Cysteine/Histidine-rich C1 domain family protein 0.53 0.35 -0.3
31 AT5G11180 glutamate receptor 2.6 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 2.6, glutamate receptor
2.6		 -0.53 0.31 -0.31
32 AT3G23580 ribonucleotide reductase 2A RNR2, ribonucleotide reductase 2A 0.53 0.32 -0.33
33 AT1G51460 ABC-2 type transporter family protein ATP-binding cassette G13 -0.53 0.3 -0.3
34 AT4G04730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: sperm cell, pedicel; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G13500.1); Has 49 Blast hits
to 49 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.32 -0.32
35 AT1G35617 unknown protein; Has 262 Blast hits to 207 proteins in 54
species: Archae - 0; Bacteria - 28; Metazoa - 70; Fungi -
8; Plants - 93; Viruses - 20; Other Eukaryotes - 43
(source: NCBI BLink).		 -0.53 0.33 -0.32
36 AT4G02690 Bax inhibitor-1 family protein -0.53 0.3 -0.29
37 AT3G53840 Protein kinase superfamily protein -0.52 0.31 -0.33
38 AT1G15830 unknown protein; Has 165982 Blast hits to 57214 proteins in
2459 species: Archae - 263; Bacteria - 44622; Metazoa -
55751; Fungi - 10656; Plants - 17613; Viruses - 2527; Other
Eukaryotes - 34550 (source: NCBI BLink).		 0.52 0.33 -0.33
39 AT3G07520 glutamate receptor 1.4 ATGLR1.4, glutamate receptor 1.4 -0.52 0.33 -0.32
40 AT4G36490 SEC14-like 12 SEC14-LIKE 12, SEC14-like 12 -0.51 0.3 -0.32
41 AT3G10580 Homeodomain-like superfamily protein -0.51 0.35 -0.3
42 AT2G15550 transposable element gene -0.51 0.32 -0.32
43 AT2G29880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G27260.1); Has 260 Blast hits
to 212 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 10; Plants - 240; Viruses - 0; Other
Eukaryotes - 9 (source: NCBI BLink).		 0.51 0.33 -0.32
44 AT5G46670 Cysteine/Histidine-rich C1 domain family protein -0.51 0.33 -0.33
45 AT2G24400 SAUR-like auxin-responsive protein family -0.51 0.32 -0.31
46 AT3G60240 eukaryotic translation initiation factor 4G CUCUMOVIRUS MULTIPLICATION 2,
eukaryotic translation initiation
factor 4G		 -0.51 0.32 -0.32
47 AT1G56570 Tetratricopeptide repeat (TPR)-like superfamily protein PENTATRICOPEPTIDE REPEAT PROTEIN
FOR GERMINATION ON NaCl		 -0.5 0.3 -0.33
48 AT2G28640 exocyst subunit exo70 family protein H5 exocyst subunit exo70 family
protein H5, exocyst subunit exo70
family protein H5		 -0.5 0.31 -0.3
49 AT2G01840 transposable element gene -0.5 0.32 -0.32
50 AT5G12370 exocyst complex component sec10 exocyst complex component sec10 -0.5 0.3 -0.3
51 AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein -0.5 0.32 -0.32
52 AT2G35630 ARM repeat superfamily protein GEM1, MICROTUBULE ORGANIZATION 1 -0.5 0.31 -0.32
53 AT2G13270 transposable element gene -0.5 0.32 -0.33
54 AT1G47520 transposable element gene -0.5 0.31 -0.3
55 AT3G16040 Translation machinery associated TMA7 -0.5 0.32 -0.31
56 AT3G58390 Eukaryotic release factor 1 (eRF1) family protein 0.5 0.32 -0.32
57 AT2G40770 zinc ion binding;DNA binding;helicases;ATP binding;nucleic
acid binding		 -0.5 0.31 -0.32
58 AT3G20690 F-box and associated interaction domains-containing protein 0.5 0.31 -0.31
59 AT5G15140 Galactose mutarotase-like superfamily protein -0.49 0.32 -0.32
60 AT3G46380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.49 0.31 -0.31
61 AT5G38760 Late embryogenesis abundant protein (LEA) family protein 0.49 0.28 -0.3
62 AT3G23460 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.49 0.32 -0.32
63 AT4G15020 hAT transposon superfamily -0.48 0.31 -0.3
64 AT2G27220 BEL1-like homeodomain 5 BEL1-like homeodomain 5 -0.48 0.34 -0.33
65 AT5G29050 Protein of unknown function (DUF3287) -0.48 0.32 -0.34
66 AT3G32270 transposable element gene -0.48 0.3 -0.3
67 AT4G39870 TLD-domain containing nucleolar protein 0.48 0.33 -0.28
68 AT3G08560 vacuolar H+-ATPase subunit E isoform 2 vacuolar H+-ATPase subunit E
isoform 2		 0.48 0.32 -0.31
69 AT4G31900 chromatin remodeling factor, putative PICKLE RELATED 2 -0.48 0.31 -0.32
70 AT2G39790 Mitochondrial glycoprotein family protein 0.48 0.31 -0.3
71 AT1G17330 Metal-dependent phosphohydrolase 0.48 0.3 -0.32
72 AT5G41790 COP1-interactive protein 1 COP1-interactive protein 1 -0.48 0.32 -0.34
73 AT1G18990 Protein of unknown function, DUF593 0.48 0.3 -0.31
74 AT3G30210 myb domain protein 121 ATMYB121, myb domain protein 121 -0.47 0.33 -0.33
75 AT2G05960 transposable element gene -0.47 0.32 -0.32
76 AT3G24715 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.47 0.31 -0.33
77 AT4G30940 BTB/POZ domain with WD40/YVTN repeat-like protein -0.47 0.3 -0.33
78 AT3G29070 emp24/gp25L/p24 family/GOLD family protein -0.47 0.32 -0.31
79 AT2G37830 pseudogene, glycine-rich protein -0.47 0.31 -0.29
80 AT5G26130 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.47 0.31 -0.33
81 AT1G08270 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST
Arabidopsis thaliana protein match is: AAA-type ATPase
family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to
1133 proteins in 252 species: Archae - 47; Bacteria - 0;
Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0;
Other Eukaryotes - 178 (source: NCBI BLink).		 0.46 0.31 -0.31
82 AT4G03170 AP2/B3-like transcriptional factor family protein -0.46 0.31 -0.32
83 AT2G19960 hAT family dimerisation domain -0.46 0.32 -0.3
84 AT5G47340 alpha/beta-Hydrolases superfamily protein -0.46 0.32 -0.34
85 AT5G17680 disease resistance protein (TIR-NBS-LRR class), putative -0.46 0.31 -0.31
86 AT3G42120 transposable element gene -0.46 0.32 -0.31
87 AT2G02140 low-molecular-weight cysteine-rich 72 low-molecular-weight cysteine-rich
72, PDF2.6		 -0.46 0.31 -0.3
88 AT2G38840 Guanylate-binding family protein -0.45 0.29 -0.32
89 AT3G18220 Phosphatidic acid phosphatase (PAP2) family protein -0.45 0.33 -0.31
90 AT2G02520 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 -0.45 0.31 -0.32
91 AT2G13950 Cysteine/Histidine-rich C1 domain family protein 0.45 0.3 -0.32
92 AT3G02970 EXORDIUM like 6 EXORDIUM like 6 -0.45 0.31 -0.3
93 AT1G34200 Glyceraldehyde-3-phosphate dehydrogenase-like family
protein		 -0.45 0.31 -0.32
94 AT5G28890 transposable element gene -0.45 0.32 -0.32
95 AT2G28170 Cation/hydrogen exchanger family protein ATCHX7, CATION/H+ EXCHANGER 7 -0.45 0.3 -0.34
96 AT2G06490 transposable element gene -0.45 0.32 -0.32
97 AT5G55330 MBOAT (membrane bound O-acyl transferase) family protein -0.45 0.34 -0.34
98 AT5G26620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits
to 48 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.45 0.31 -0.29
99 AT1G20390 transposable element gene -0.45 0.34 -0.33
100 AT2G30680 BEST Arabidopsis thaliana protein match is: glucan
synthase-like 3 (TAIR:AT2G31960.2); Has 80 Blast hits to 80
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.44 0.32 -0.32
101 AT2G06140 transposable element gene 0.44 0.29 -0.32
102 AT1G10417 Encodes protein with unknown function whose expression is
repressed by inoculation with Agrobacterium tumerifaciens.		 0.44 0.32 -0.3
103 AT1G62860 pseudogene of pentatricopeptide (PPR) repeat-containing
protein		 0.44 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
104 C0181 MST_2904.3 - - - -0.66 0.44 -0.46
105 C0185 MST_3139.9 - - - 0.59 0.43 -0.46