AT3G62560 : -
Query Information
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AGICode AT3G62560
Description Ras-related small GTP-binding family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G62560 Ras-related small GTP-binding family protein 1 0.34 -0.3
2 AT5G51350 Leucine-rich repeat transmembrane protein kinase family
protein		 MORE LATERAL GROWTH1 -0.81 0.33 -0.32
3 AT4G37880 LisH/CRA/RING-U-box domains-containing protein 0.78 0.31 -0.3
4 AT1G56230 Protein of unknown function (DUF1399) -0.76 0.33 -0.31
5 AT2G19790 SNARE-like superfamily protein 0.76 0.31 -0.31
6 AT5G54280 myosin 2 myosin 2, ARABIDOPSIS THALIANA
MYOSIN 4, ARABIDOPSIS THALIANA
MYOSIN 1		 -0.75 0.31 -0.31
7 AT1G03350 BSD domain-containing protein 0.75 0.32 -0.3
8 AT1G75950 S phase kinase-associated protein 1 ARABIDOPSIS SKP1 HOMOLOGUE 1,
ATSKP1, S phase kinase-associated
protein 1, SKP1A, UFO INTERACTING
PROTEIN 1		 0.75 0.31 -0.3
9 AT4G38920 vacuolar-type H(+)-ATPase C3 vacuolar-type H(+)-ATPase C3,
AVA-P3, vacuolar-type H(+)-ATPase
C3		 0.74 0.32 -0.3
10 AT1G15370 SNARE-like superfamily protein 0.74 0.32 -0.3
11 AT1G05270 TraB family protein 0.74 0.34 -0.31
12 AT3G01390 vacuolar membrane ATPase 10 AVMA10, vacuolar membrane ATPase
10		 0.74 0.34 -0.32
13 AT5G39510 Vesicle transport v-SNARE family protein VESICLE TRANSPORT V-SNARE 11,
ATVTI1A, SHOOT GRAVITROPSIM 4,
VESICLE TRANSPORT V-SNARE 11,
VTI1A, ZIG, ZIG1		 0.74 0.32 -0.32
14 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.74 0.3 -0.33
15 AT4G20150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, mitochondrial respiratory
chain complex I, respiratory chain complex I; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.73 0.3 -0.31
16 AT4G26710 ATPase, V0 complex, subunit E 0.73 0.31 -0.32
17 AT1G45688 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast
hits to 242 proteins in 39 species: Archae - 0; Bacteria -
11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17;
Other Eukaryotes - 8 (source: NCBI BLink).		 0.73 0.34 -0.29
18 AT4G22220 SufE/NifU family protein ATISU1, ISU1 0.73 0.3 -0.32
19 AT5G52840 NADH-ubiquinone oxidoreductase-related 0.73 0.29 -0.32
20 AT3G12290 Amino acid dehydrogenase family protein 0.73 0.31 -0.31
21 AT5G09920 RNA polymerase II, Rpb4, core protein ATRPB15.9, NRPB4, RPB15.9,
RPB15.9.9		 0.73 0.31 -0.34
22 AT5G46860 Syntaxin/t-SNARE family protein ARABIDOPSIS THALIANA SYNTAXIN OF
PLANTS 22, ARABIDOPSIS THALIANA
VACUOLAR MORPHOLOGY 3, SHOOT
GRAVITROPISM 3, SYNTAXIN OF PLANTS
22, VACUOLAR MORPHOLOGY 3		 0.73 0.29 -0.3
23 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein 0.73 0.32 -0.3
24 AT3G62790 NADH-ubiquinone oxidoreductase-related 0.72 0.32 -0.31
25 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 -0.72 0.34 -0.32
26 AT4G16444 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
CHD5-like protein (InterPro:IPR007514); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.72 0.29 -0.31
27 AT3G06050 peroxiredoxin IIF PEROXIREDOXIN IIF, peroxiredoxin
IIF		 0.72 0.32 -0.31
28 AT1G72020 unknown protein; Has 52 Blast hits to 52 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.3 -0.31
29 AT1G70490 Ras-related small GTP-binding family protein ARFA1D, ATARFA1D 0.72 0.34 -0.29
30 AT2G21870 copper ion binding;cobalt ion binding;zinc ion binding MALE GAMETOPHYTE DEFECTIVE 1 0.72 0.31 -0.33
31 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.72 0.29 -0.31
32 AT4G30010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.72 0.3 -0.31
33 AT3G12260 LYR family of Fe/S cluster biogenesis protein 0.72 0.29 -0.3
34 AT4G02080 secretion-associated RAS super family 2 ASAR1, secretion-associated RAS
super family 2, ATSARA1C,
secretion-associated RAS super
family 2		 0.71 0.32 -0.32
35 AT4G30480 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR1, tetratricopeptide repeat 1 0.71 0.31 -0.32
36 AT1G76920 F-box family protein 0.71 0.31 -0.31
37 AT1G31940 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.3 -0.3
38 AT4G38930 Ubiquitin fusion degradation UFD1 family protein 0.71 0.32 -0.3
39 AT4G17640 casein kinase II beta chain 2 casein kinase II beta chain 2 0.71 0.28 -0.31
40 AT4G31990 aspartate aminotransferase 5 ASPARTATE AMINOTRANSFERASE
DEFICIENT 3, aspartate
aminotransferase 5, ATAAT1		 0.7 0.31 -0.3
41 AT3G09740 syntaxin of plants 71 ATSYP71, syntaxin of plants 71 0.7 0.31 -0.34
42 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.31 -0.29
43 AT1G05010 ethylene-forming enzyme ethylene forming enzyme, EAT1,
ethylene-forming enzyme		 0.7 0.3 -0.31
44 AT3G08610 unknown protein; Has 40 Blast hits to 40 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.29 -0.33
45 AT5G67590 NADH-ubiquinone oxidoreductase-related FROSTBITE1 0.7 0.32 -0.35
46 AT3G52220 CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain
(InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins
in 346 species: Archae - 10; Bacteria - 184; Metazoa -
3955; Fungi - 1221; Plants - 712; Viruses - 24; Other
Eukaryotes - 2776 (source: NCBI BLink).		 0.69 0.32 -0.3
47 AT4G36750 Quinone reductase family protein 0.69 0.31 -0.3
48 AT5G13450 delta subunit of Mt ATP synthase delta subunit of Mt ATP synthase 0.69 0.3 -0.31
49 AT5G09310 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl
protease complex, presenilin enhancer-2 subunit
(InterPro:IPR019379); Has 168 Blast hits to 168 proteins in
71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi
- 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6
(source: NCBI BLink).		 0.69 0.33 -0.3
50 AT1G54540 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.69 0.33 -0.34
51 AT5G13720 Uncharacterised protein family (UPF0114) 0.69 0.32 -0.3
52 AT5G10450 G-box regulating factor 6 14-3-3 PROTEIN G-BOX FACTOR14
LAMBDA, AFT1, G-box regulating
factor 6		 0.69 0.3 -0.34
53 AT5G08290 mRNA splicing factor, thioredoxin-like U5 snRNP YELLOW-LEAF-SPECIFIC GENE 8 0.68 0.31 -0.29
54 AT5G06520 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 0.68 0.32 -0.33
55 AT4G27900 CCT motif family protein 0.68 0.33 -0.32
56 AT3G22790 Kinase interacting (KIP1-like) family protein -0.68 0.31 -0.33
57 AT4G40040 Histone superfamily protein 0.68 0.32 -0.31
58 AT3G55830 Nucleotide-diphospho-sugar transferases superfamily protein ECTOPICALLY PARTING CELLS 0.67 0.32 -0.3
59 AT4G35420 dihydroflavonol 4-reductase-like1 dihydroflavonol 4-reductase-like1,
tetraketide alpha-pyrone reductase
1		 -0.67 0.3 -0.3
60 AT1G48900 Signal recognition particle, SRP54 subunit protein 0.67 0.31 -0.3
61 AT1G79950 RAD3-like DNA-binding helicase protein -0.67 0.34 -0.32
62 AT1G05720 selenoprotein family protein 0.67 0.3 -0.31
63 AT3G55440 triosephosphate isomerase CYTOSOLIC TRIOSE PHOSPHATE
ISOMERASE, CYTOSOLIC ISOFORM
TRIOSE PHOSPHATE ISOMERASE,
triosephosphate isomerase		 0.67 0.3 -0.34
64 AT2G36670 Eukaryotic aspartyl protease family protein -0.67 0.32 -0.31
65 AT2G42590 general regulatory factor 9 GF14 MU, general regulatory factor
9		 0.67 0.33 -0.3
66 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 -0.67 0.34 -0.34
67 AT2G28070 ABC-2 type transporter family protein ATP-binding cassette G3 -0.66 0.3 -0.31
68 AT4G26130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G56980.1); Has 121 Blast hits to 116 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi -
0; Plants - 113; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.66 0.32 -0.3
69 AT1G55200 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.66 0.32 -0.32
70 AT5G59210 myosin heavy chain-related 0.66 0.29 -0.3
71 AT5G67290 FAD-dependent oxidoreductase family protein 0.66 0.31 -0.29
72 AT4G26460 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.31 -0.31
73 AT4G21160 Calcium-dependent ARF-type GTPase activating protein family ARF-GAP domain 12, ZAC 0.66 0.29 -0.29
74 AT4G02980 endoplasmic reticulum auxin binding protein 1 ABP, endoplasmic reticulum auxin
binding protein 1		 0.66 0.31 -0.3
75 AT3G43760 transposable element gene -0.66 0.33 -0.31
76 AT1G51540 Galactose oxidase/kelch repeat superfamily protein 0.65 0.32 -0.31
77 AT5G62910 RING/U-box superfamily protein 0.65 0.3 -0.31
78 AT1G30540 Actin-like ATPase superfamily protein 0.65 0.31 -0.31
79 AT2G03690 coenzyme Q biosynthesis Coq4 family protein / ubiquinone
biosynthesis Coq4 family protein		 0.65 0.33 -0.32
80 AT5G46910 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 -0.65 0.32 -0.32
81 AT4G25240 SKU5 similar 1 SKU5 similar 1 -0.65 0.31 -0.34
82 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D		 -0.64 0.33 -0.31
83 AT5G19600 sulfate transporter 3;5 sulfate transporter 3;5 -0.64 0.32 -0.33
84 AT3G57950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation
and expansion stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast
hits to 81 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.32 -0.31
85 AT5G08210 MIR834a; miRNA microRNA834A -0.63 0.31 -0.32
86 AT2G01210 Leucine-rich repeat protein kinase family protein -0.63 0.33 -0.3
87 AT2G37360 ABC-2 type transporter family protein ATP-binding cassette G2 -0.63 0.32 -0.31
88 AT2G03200 Eukaryotic aspartyl protease family protein -0.63 0.31 -0.31
89 AT5G09520 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 2 -0.62 0.33 -0.31
90 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein -0.62 0.31 -0.31
91 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 -0.62 0.32 -0.32
92 AT5G09530 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1,
proline-rich protein 10		 -0.62 0.35 -0.31
93 AT5G02920 F-box/RNI-like superfamily protein -0.62 0.31 -0.32
94 AT1G60860 ARF-GAP domain 2 ARF-GAP domain 2 -0.62 0.34 -0.32
95 AT5G57100 Nucleotide/sugar transporter family protein -0.61 0.33 -0.33
96 AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.61 0.33 -0.32
97 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 -0.61 0.32 -0.31
98 AT5G56790 Protein kinase superfamily protein -0.61 0.32 -0.32
99 AT5G51590 AT hook motif DNA-binding family protein -0.6 0.31 -0.34
100 AT5G10100 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
I		 -0.6 0.33 -0.29
101 AT3G26560 ATP-dependent RNA helicase, putative -0.59 0.32 -0.32
102 AT4G21590 endonuclease 3 endonuclease 3 -0.59 0.32 -0.31
103 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 -0.59 0.29 -0.3
104 AT2G29130 laccase 2 ATLAC2, laccase 2 -0.59 0.31 -0.31
105 AT4G02660 Beige/BEACH domain ;WD domain, G-beta repeat protein -0.59 0.33 -0.32
106 AT2G22920 serine carboxypeptidase-like 12 serine carboxypeptidase-like 12 -0.58 0.32 -0.3
107 AT1G64790 ILITYHIA ILITYHIA -0.58 0.32 -0.31
108 AT1G42250 transposable element gene -0.58 0.32 -0.3
109 AT3G53510 ABC-2 type transporter family protein ATP-binding cassette G20 -0.57 0.32 -0.3
110 AT4G37650 GRAS family transcription factor SHOOT GRAVITROPISM 7, SHORT ROOT -0.57 0.3 -0.37
111 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 -0.57 0.33 -0.32
112 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.57 0.32 -0.33
113 AT1G15750 Transducin family protein / WD-40 repeat family protein TOPLESS, WUS-INTERACTING PROTEIN 1 -0.56 0.31 -0.31