AT3G62800 : double-stranded-RNA-binding protein 4
Query Information
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AGICode AT3G62800
Description double-stranded-RNA-binding protein 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G62800 double-stranded-RNA-binding protein 4 double-stranded-RNA-binding
protein 4		 1 0.29 -0.32
2 AT5G36140 cytochrome P450, family 716, subfamily A, polypeptide 2 cytochrome P450, family 716,
subfamily A, polypeptide 2		 -0.74 0.31 -0.29
3 AT1G73040 Mannose-binding lectin superfamily protein 0.73 0.31 -0.31
4 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.73 0.31 -0.32
5 AT2G18220 Noc2p family -0.73 0.3 -0.32
6 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.72 0.29 -0.32
7 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 0.72 0.32 -0.34
8 AT5G16990 Zinc-binding dehydrogenase family protein 0.72 0.32 -0.3
9 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.31 -0.29
10 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 -0.69 0.31 -0.32
11 AT4G19860 alpha/beta-Hydrolases superfamily protein 0.69 0.33 -0.31
12 AT1G16060 ARIA-interacting double AP2 domain protein ARIA-interacting double AP2 domain
protein		 -0.69 0.31 -0.32
13 AT3G01260 Galactose mutarotase-like superfamily protein -0.69 0.29 -0.33
14 AT3G55510 Noc2p family REBELOTE -0.69 0.32 -0.31
15 AT5G65760 Serine carboxypeptidase S28 family protein 0.68 0.29 -0.33
16 AT3G06330 RING/U-box superfamily protein 0.68 0.32 -0.3
17 AT5G22740 cellulose synthase-like A02 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE A02, ARABIDOPSIS
THALIANA CELLULOSE SYNTHASE-LIKE
A2, cellulose synthase-like A02,
CELLULOSE SYNTHASE-LIKE A 2		 -0.68 0.36 -0.3
18 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein 0.68 0.34 -0.32
19 AT1G31020 thioredoxin O2 thioredoxin O2, thioredoxin O2 -0.68 0.31 -0.3
20 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE -0.68 0.33 -0.31
21 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 0.67 0.34 -0.32
22 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.67 0.31 -0.32
23 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).		 -0.67 0.33 -0.32
24 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 -0.67 0.31 -0.3
25 AT1G33670 Leucine-rich repeat (LRR) family protein -0.67 0.28 -0.31
26 AT3G62650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits
to 57 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.32 -0.35
27 AT1G77030 hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases		 -0.67 0.32 -0.32
28 AT1G76340 golgi nucleotide sugar transporter 3 golgi nucleotide sugar transporter
3		 -0.66 0.29 -0.34
29 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 -0.66 0.31 -0.31
30 AT5G10550 global transcription factor group E2 global transcription factor group
E2		 0.66 0.32 -0.36
31 AT2G35230 VQ motif-containing protein IKU1, HAIKU1 -0.66 0.33 -0.31
32 AT3G03810 O-fucosyltransferase family protein embryo sac development arrest 30 -0.66 0.32 -0.32
33 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 0.66 0.3 -0.32
34 AT5G09900 26S proteasome regulatory subunit, putative (RPN5) EMBRYO DEFECTIVE 2107, MARIPOSA,
REGULATORY PARTICLE NON-ATPASE
SUBUNIT 5A		 -0.65 0.33 -0.31
35 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 -0.65 0.32 -0.31
36 AT5G41960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.65 0.33 -0.32
37 AT2G42950 Magnesium transporter CorA-like family protein 0.65 0.31 -0.34
38 AT1G74770 zinc ion binding -0.65 0.33 -0.33
39 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A		 -0.65 0.31 -0.32
40 AT1G70350 unknown protein; Has 98 Blast hits to 98 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.33 -0.33
41 AT1G30260 BEST Arabidopsis thaliana protein match is:
Galactosyltransferase family protein (TAIR:AT4G21060.1);
Has 30 Blast hits to 30 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.28 -0.33
42 AT3G27820 monodehydroascorbate reductase 4 MONODEHYDROASCORBATE REDUCTASE 4,
monodehydroascorbate reductase 4		 0.65 0.34 -0.32
43 AT1G77690 like AUX1 3 like AUX1 3 -0.64 0.33 -0.32
44 AT4G15850 RNA helicase 1 RNA helicase 1, RNA helicase 1 -0.64 0.33 -0.31
45 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.3 -0.32
46 AT5G37680 ADP-ribosylation factor-like A1A ADP-ribosylation factor-like A1A,
ADP-ribosylation factor-like A1A		 0.64 0.31 -0.33
47 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 -0.64 0.32 -0.32
48 AT3G09720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.29 -0.33
49 AT3G11830 TCP-1/cpn60 chaperonin family protein -0.64 0.32 -0.29
50 AT3G56900 Transducin/WD40 repeat-like superfamily protein -0.63 0.32 -0.31
51 AT3G51270 protein serine/threonine kinases;ATP binding;catalytics -0.63 0.32 -0.35
52 AT4G30960 SOS3-interacting protein 3 CBL-INTERACTING PROTEIN KINASE 6,
CBL-INTERACTING PROTEIN KINASE 6,
SOS3-interacting protein 3,
SNF1-RELATED PROTEIN KINASE 3.14		 0.63 0.32 -0.33
53 AT2G18740 Small nuclear ribonucleoprotein family protein -0.63 0.3 -0.31
54 AT2G23780 RING/U-box superfamily protein 0.63 0.31 -0.3
55 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 0.63 0.32 -0.32
56 AT2G42240 RNA-binding (RRM/RBD/RNP motifs) family protein 0.63 0.29 -0.33
57 AT3G07750 3'-5'-exoribonuclease family protein -0.62 0.31 -0.3
58 AT2G28450 zinc finger (CCCH-type) family protein -0.62 0.33 -0.3
59 AT3G26740 CCR-like CCR-like 0.62 0.3 -0.34
60 AT5G26960 Galactose oxidase/kelch repeat superfamily protein 0.62 0.33 -0.32
61 AT3G49190 O-acyltransferase (WSD1-like) family protein -0.61 0.3 -0.33
62 AT5G48070 xyloglucan endotransglucosylase/hydrolase 20 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 20,
xyloglucan
endotransglucosylase/hydrolase 20		 -0.61 0.34 -0.33
63 AT3G05990 Leucine-rich repeat (LRR) family protein -0.61 0.3 -0.31
64 AT5G22460 alpha/beta-Hydrolases superfamily protein 0.61 0.32 -0.3
65 AT3G61590 Galactose oxidase/kelch repeat superfamily protein HS, HAWAIIAN SKIRT -0.61 0.3 -0.32
66 AT1G62930 Tetratricopeptide repeat (TPR)-like superfamily protein RNA processing factor 3 -0.61 0.33 -0.3
67 AT1G76760 thioredoxin Y1 thioredoxin Y1, THIOREDOXIN Y1,
thioredoxin Y1		 -0.6 0.32 -0.33
68 AT4G26610 D6 protein kinase like 1 AGC1-2, D6 protein kinase like 1 -0.6 0.32 -0.31
69 AT2G42810 protein phosphatase 5.2 Arabidopsis thaliana protein
phosphatase 5, PAPP5, PROTEIN
PHOSPHATASE 5, protein phosphatase
5.2		 -0.6 0.32 -0.31
70 AT5G19930 Protein of unknown function DUF92, transmembrane -0.6 0.33 -0.32
71 AT4G20230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.6 0.31 -0.32
72 AT5G22760 PHD finger family protein 0.6 0.32 -0.3
73 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.6 0.3 -0.32
74 AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family
protein		 -0.6 0.32 -0.3
75 AT5G66815 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.3 -0.28
76 AT5G53830 VQ motif-containing protein 0.6 0.29 -0.3
77 AT1G50370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtFYPP1, flower- specific,
phytochrome-associated protein
phosphatase 1		 -0.6 0.31 -0.31
78 AT1G74300 alpha/beta-Hydrolases superfamily protein 0.6 0.32 -0.3
79 AT2G19310 HSP20-like chaperones superfamily protein 0.59 0.34 -0.3
80 AT4G33310 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.32 -0.31
81 AT1G07830 ribosomal protein L29 family protein -0.59 0.3 -0.33
82 AT4G03180 CONTAINS InterPro DOMAIN/s: rRNA processing
(InterPro:IPR013730); Has 898 Blast hits to 687 proteins in
142 species: Archae - 2; Bacteria - 28; Metazoa - 200;
Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes -
506 (source: NCBI BLink).		 -0.59 0.33 -0.32
83 AT4G15480 UDP-Glycosyltransferase superfamily protein UGT84A1 -0.59 0.32 -0.32
84 AT2G44300 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.59 0.33 -0.31
85 AT1G23160 Auxin-responsive GH3 family protein -0.59 0.32 -0.32
86 AT3G04600 Nucleotidylyl transferase superfamily protein -0.59 0.31 -0.29
87 AT3G28790 Protein of unknown function (DUF1216) 0.59 0.32 -0.31
88 AT2G38910 calcium-dependent protein kinase 20 calcium-dependent protein kinase
20		 -0.59 0.31 -0.33
89 AT3G47840 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.3 -0.3
90 AT5G64950 Mitochondrial transcription termination factor family
protein		 -0.58 0.32 -0.32
91 AT1G43760 DNAse I-like superfamily protein -0.58 0.33 -0.32
92 AT5G53070 Ribosomal protein L9/RNase H1 -0.58 0.31 -0.31
93 AT2G42860 unknown protein; Has 446 Blast hits to 326 proteins in 94
species: Archae - 0; Bacteria - 32; Metazoa - 113; Fungi -
93; Plants - 21; Viruses - 4; Other Eukaryotes - 183
(source: NCBI BLink).		 0.58 0.29 -0.31
94 AT4G00270 DNA-binding storekeeper protein-related transcriptional
regulator		 0.58 0.33 -0.3
95 AT1G80670 Transducin/WD40 repeat-like superfamily protein RNA export factor 1 -0.58 0.34 -0.32
96 AT4G13440 Calcium-binding EF-hand family protein -0.58 0.32 -0.31
97 AT5G43720 Protein of unknown function (DUF2361) -0.58 0.31 -0.31
98 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 0.58 0.33 -0.31
99 AT3G23090 TPX2 (targeting protein for Xklp2) protein family -0.58 0.32 -0.3
100 AT1G33680 KH domain-containing protein -0.58 0.3 -0.34
101 AT5G05550 sequence-specific DNA binding transcription factors 0.58 0.35 -0.33
102 AT5G38450 cytochrome P450, family 735, subfamily A, polypeptide 1 cytochrome P450, family 735,
subfamily A, polypeptide 1		 -0.58 0.3 -0.31
103 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN -0.58 0.31 -0.32
104 AT1G47340 F-box and associated interaction domains-containing protein 0.57 0.32 -0.32
105 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 0.57 0.31 -0.32
106 AT5G64280 dicarboxylate transporter 2.2 dicarboxylate transporter 2.2 0.57 0.31 -0.32
107 AT4G26090 NB-ARC domain-containing disease resistance protein RESISTANT TO P. SYRINGAE 2 0.57 0.35 -0.32
108 AT4G16490 ARM repeat superfamily protein 0.57 0.32 -0.35