AT3G62380 : -
Query Information
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AGICode AT3G62380
Description CONTAINS InterPro DOMAIN/s: F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G71320.1); Has 422 Blast hits to 419 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 1 0.32 -0.32
2 AT4G26950 Protein of unknown function, DUF584 0.75 0.32 -0.34
3 AT1G30160 Protein of unknown function (DUF295) 0.71 0.34 -0.31
4 AT1G78100 F-box family protein auxin up-regulated f-box protein 1 -0.7 0.33 -0.35
5 AT4G14090 UDP-Glycosyltransferase superfamily protein 0.7 0.31 -0.31
6 AT5G47370 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein HAT2 -0.69 0.3 -0.32
7 AT5G65670 indole-3-acetic acid inducible 9 indole-3-acetic acid inducible 9 -0.68 0.34 -0.28
8 AT5G54510 Auxin-responsive GH3 family protein DWARF IN LIGHT 1, GH3.6 -0.67 0.33 -0.3
9 AT4G01010 cyclic nucleotide-gated channel 13 CYCLIC NUCLEOTIDE-GATED CHANNEL
13, cyclic nucleotide-gated
channel 13		 0.66 0.32 -0.32
10 AT4G34970 actin depolymerizing factor 9 actin depolymerizing factor 9 -0.65 0.31 -0.3
11 AT1G80100 histidine phosphotransfer protein 6 histidine phosphotransfer protein
6, histidine phosphotransfer
protein 6		 -0.65 0.31 -0.35
12 AT4G13210 Pectin lyase-like superfamily protein -0.65 0.34 -0.33
13 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.64 0.32 -0.3
14 AT2G20950 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.64 0.31 -0.3
15 AT3G15540 indole-3-acetic acid inducible 19 indole-3-acetic acid inducible 19,
MASSUGU 2		 -0.64 0.31 -0.3
16 AT1G27620 HXXXD-type acyl-transferase family protein -0.64 0.32 -0.32
17 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 0.64 0.33 -0.31
18 AT5G49510 prefoldin 3 prefoldin 3 -0.63 0.31 -0.31
19 AT5G60200 TARGET OF MONOPTEROS 6 TARGET OF MONOPTEROS 6 -0.63 0.32 -0.31
20 AT5G42800 dihydroflavonol 4-reductase dihydroflavonol 4-reductase, M318,
TT3		 0.63 0.32 -0.31
21 AT1G13670 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.33 -0.3
22 AT1G74030 enolase 1 enolase 1 -0.62 0.31 -0.31
23 AT5G24660 response to low sulfur 2 RESPONSE TO LOW SULFUR 2 0.61 0.32 -0.29
24 AT4G38590 beta-galactosidase 14 beta-galactosidase 14 0.61 0.31 -0.3
25 AT4G14560 indole-3-acetic acid inducible AUXIN RESISTANT 5, indole-3-acetic
acid inducible		 -0.61 0.34 -0.29
26 AT1G79580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 33, SOMBRERO		 -0.61 0.32 -0.31
27 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 -0.61 0.31 -0.31
28 AT1G02260 Divalent ion symporter 0.61 0.32 -0.31
29 AT3G45090 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.31 -0.31
30 AT1G17260 autoinhibited H(+)-ATPase isoform 10 autoinhibited H(+)-ATPase isoform
10		 0.61 0.3 -0.31
31 AT5G12410 THUMP domain-containing protein -0.6 0.33 -0.3
32 AT3G51270 protein serine/threonine kinases;ATP binding;catalytics -0.6 0.32 -0.31
33 AT1G26820 ribonuclease 3 ribonuclease 3 -0.6 0.33 -0.33
34 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 -0.59 0.31 -0.33
35 AT5G62260 AT hook motif DNA-binding family protein -0.59 0.33 -0.31
36 AT2G07030 transposable element gene 0.59 0.32 -0.32
37 AT3G56120 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.59 0.3 -0.32
38 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein -0.59 0.3 -0.31
39 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.59 0.34 -0.31
40 AT4G38850 SAUR-like auxin-responsive protein family ARABIDOPSIS THALIANA SMALL AUXIN
UPREGULATED 15, ARABIDOPSIS
COLUMBIA SAUR GENE 1, SMALL AUXIN
UPREGULATED 15, SMALL AUXIN UP RNA
1 FROM ARABIDOPSIS THALIANA
ECOTYPE COLUMBIA		 -0.59 0.3 -0.32
41 AT5G28640 SSXT family protein ANGUSTIFOLIA 3, ARABIDOPSIS
GRF1-INTERACTING FACTOR 1,
GRF1-INTERACTING FACTOR,
GRF1-INTERACTING FACTOR 1		 -0.59 0.34 -0.32
42 AT1G25390 Protein kinase superfamily protein 0.59 0.31 -0.32
43 AT1G51670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48180.1); Has 37 Blast hits
to 37 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.31 -0.34
44 AT5G59010 Protein kinase protein with tetratricopeptide repeat domain -0.59 0.34 -0.33
45 AT1G22030 CONTAINS InterPro DOMAIN/s: Protein BYPASS related
(InterPro:IPR008511); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast
hits to 99 proteins in 17 species: Archae - 0; Bacteria -
0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.29
46 AT5G53320 Leucine-rich repeat protein kinase family protein -0.59 0.28 -0.32
47 AT5G48560 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.59 0.3 -0.34
48 AT2G23830 PapD-like superfamily protein 0.59 0.31 -0.34
49 AT5G57190 phosphatidylserine decarboxylase 2 phosphatidylserine decarboxylase 2 0.58 0.34 -0.32
50 AT5G40200 DegP protease 9 DegP protease 9 -0.58 0.3 -0.31
51 AT4G37650 GRAS family transcription factor SHOOT GRAVITROPISM 7, SHORT ROOT -0.58 0.31 -0.35
52 AT5G43030 Cysteine/Histidine-rich C1 domain family protein -0.58 0.32 -0.32
53 AT3G23090 TPX2 (targeting protein for Xklp2) protein family -0.58 0.29 -0.32
54 AT4G39190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits
to 3562 proteins in 401 species: Archae - 12; Bacteria -
497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses -
22; Other Eukaryotes - 3119 (source: NCBI BLink).		 0.58 0.32 -0.31
55 AT5G66280 GDP-D-mannose 4,6-dehydratase 1 GDP-D-mannose 4,6-dehydratase 1 -0.58 0.32 -0.32
56 AT2G19580 tetraspanin2 tetraspanin2 -0.57 0.33 -0.32
57 AT2G47270 sequence-specific DNA binding transcription
factors;transcription regulators		 UPBEAT1 -0.57 0.32 -0.32
58 AT4G27300 S-locus lectin protein kinase family protein 0.57 0.31 -0.32
59 AT5G44870 Disease resistance protein (TIR-NBS-LRR class) family LAZARUS 5, tolerance to Tobacco
ringspot virus 1		 0.57 0.29 -0.33
60 AT4G38130 histone deacetylase 1 ARABIDOPSIS HISTONE DEACETYLASE 1,
ARABIDOPSIS HISTONE DEACETYLASE
19, histone deacetylase 1, HDA1,
HISTONE DEACETYLASE 19, RPD3A		 -0.56 0.34 -0.33
61 AT1G56680 Chitinase family protein -0.56 0.33 -0.31
62 AT4G39860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits
to 146 proteins in 19 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.56 0.32 -0.31
63 AT4G16590 cellulose synthase-like A01 cellulose synthase-like A01,
CELLULOSE SYNTHASE-LIKE A1,
CSLA01, cellulose synthase-like
A01		 0.56 0.32 -0.33
64 AT4G34870 rotamase cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
1, rotamase cyclophilin 5		 -0.56 0.35 -0.3
65 AT2G26290 root-specific kinase 1 root-specific kinase 1 -0.56 0.3 -0.31
66 AT3G30350 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 4 -0.56 0.34 -0.31
67 AT1G78790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2008
(InterPro:IPR018552); Has 27 Blast hits to 27 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.55 0.33 -0.33
68 AT2G19980 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.55 0.3 -0.3
69 AT3G05890 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2B -0.55 0.32 -0.31
70 AT2G04650 ADP-glucose pyrophosphorylase family protein -0.55 0.3 -0.3
71 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein -0.55 0.32 -0.34
72 AT3G23030 indole-3-acetic acid inducible 2 indole-3-acetic acid inducible 2 -0.55 0.33 -0.32
73 AT5G60980 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.55 0.31 -0.34
74 AT3G55720 Protein of unknown function (DUF620) -0.55 0.32 -0.3
75 AT5G10850 transposable element gene -0.55 0.32 -0.32
76 AT3G24450 Heavy metal transport/detoxification superfamily protein -0.54 0.31 -0.31
77 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein -0.54 0.32 -0.32
78 AT1G27090 glycine-rich protein -0.54 0.3 -0.29
79 AT3G56690 Cam interacting protein 111 Cam interacting protein 111 -0.54 0.3 -0.31
80 AT4G19980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING:
4 anthesis; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.54 0.31 -0.33
81 AT1G75520 SHI-related sequence 5 SHI-related sequence 5 -0.54 0.32 -0.29
82 AT4G36710 GRAS family transcription factor Arabidopsis thaliana HAIRY
MERISTEM 4, HAM4		 0.53 0.33 -0.34
83 AT4G17250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits
to 31 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.51 0.32 -0.33
84 AT3G19090 RNA-binding protein 0.5 0.32 -0.32
85 AT4G19730 Glycosyl hydrolase superfamily protein 0.5 0.3 -0.31
86 AT5G05190 Protein of unknown function (DUF3133) 0.5 0.31 -0.31
87 AT3G30290 cytochrome P450, family 702, subfamily A, polypeptide 8 cytochrome P450, family 702,
subfamily A, polypeptide 8		 0.5 0.33 -0.33