AT3G61860 : arginine/serine-rich splicing factor 31
Query Information
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AGICode AT3G61860
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 1 0.31 -0.34
2 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 0.74 0.34 -0.33
3 AT4G02710 Kinase interacting (KIP1-like) family protein -0.73 0.32 -0.3
4 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family
protein		 0.72 0.31 -0.3
5 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 -0.7 0.34 -0.33
6 AT2G28520 vacuolar proton ATPase A1 vacuolar proton ATPase A1 -0.7 0.31 -0.33
7 AT4G02350 exocyst complex component sec15B exocyst complex component sec15B -0.69 0.31 -0.32
8 AT5G54520 Transducin/WD40 repeat-like superfamily protein 0.68 0.31 -0.32
9 AT2G47350 HIT zinc finger ;PAPA-1-like conserved region -0.67 0.31 -0.34
10 AT1G10520 DNA polymerase lambda (POLL) AtPol{lambda}, DNA polymerase
{lambda}		 0.67 0.28 -0.33
11 AT2G30110 ubiquitin-activating enzyme 1 ubiquitin-activating enzyme 1,
MODIFIER OF SNC1 5,
ubiquitin-activating enzyme 1		 -0.67 0.31 -0.32
12 AT5G36140 cytochrome P450, family 716, subfamily A, polypeptide 2 cytochrome P450, family 716,
subfamily A, polypeptide 2		 -0.66 0.32 -0.34
13 AT4G32970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32960.1); Has 552 Blast hits
to 489 proteins in 85 species: Archae - 4; Bacteria - 14;
Metazoa - 187; Fungi - 12; Plants - 225; Viruses - 0; Other
Eukaryotes - 110 (source: NCBI BLink).		 -0.66 0.3 -0.31
14 AT2G32730 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 -0.66 0.32 -0.3
15 AT1G09020 homolog of yeast sucrose nonfermenting 4 ATSNF4, homolog of yeast sucrose
nonfermenting 4		 -0.66 0.32 -0.33
16 AT4G28270 RING membrane-anchor 2 ATRMA2, RING membrane-anchor 2 0.66 0.31 -0.32
17 AT4G02610 Aldolase-type TIM barrel family protein 0.65 0.28 -0.34
18 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.65 0.33 -0.3
19 AT2G05270 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.32 -0.31
20 AT1G71180 6-phosphogluconate dehydrogenase family protein 0.65 0.32 -0.28
21 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein 0.64 0.31 -0.32
22 AT1G26370 RNA helicase family protein -0.64 0.33 -0.32
23 AT5G01660 CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Development/cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089),
Kelch-type beta propeller (InterPro:IPR015915); BEST
Arabidopsis thaliana protein match is: DCD (Development and
Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133
Blast hits to 7053 proteins in 482 species: Archae - 40;
Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants -
1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI
BLink).		 0.64 0.3 -0.28
24 AT3G56830 Protein of unknown function (DUF565) 0.63 0.3 -0.32
25 AT5G53220 unknown protein; Has 3099 Blast hits to 2528 proteins in
332 species: Archae - 2; Bacteria - 245; Metazoa - 1059;
Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes -
1012 (source: NCBI BLink).		 0.63 0.3 -0.33
26 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 -0.63 0.32 -0.32
27 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN -0.63 0.32 -0.31
28 AT3G44330 INVOLVED IN: protein processing; LOCATED IN: mitochondrion,
endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Nicalin
(InterPro:IPR016574), EF-Hand 1, calcium-binding site
(InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has
245 Blast hits to 243 proteins in 99 species: Archae - 6;
Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.62 0.32 -0.3
29 AT3G12660 FASCICLIN-like arabinogalactan protein 14 precursor FASCICLIN-like arabinogalactan
protein 14 precursor		 -0.62 0.31 -0.32
30 AT5G34880 transposable element gene -0.62 0.33 -0.33
31 AT3G27510 Cysteine/Histidine-rich C1 domain family protein -0.62 0.34 -0.32
32 AT1G01670 RING/U-box superfamily protein 0.62 0.34 -0.32
33 AT1G06140 Pentatricopeptide repeat (PPR) superfamily protein mitochondrial editing factor 3 -0.62 0.3 -0.3
34 AT3G42060 myosin heavy chain-related 0.62 0.33 -0.3
35 AT1G53710 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.62 0.3 -0.3
36 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 -0.62 0.32 -0.33
37 AT5G06839 bZIP transcription factor family protein bZIP65, TGACG (TGA) motif-binding
protein 10		 -0.62 0.3 -0.31
38 AT3G45190 SIT4 phosphatase-associated family protein -0.61 0.31 -0.32
39 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B		 0.61 0.33 -0.32
40 AT3G12680 floral homeotic protein (HUA1) ENHANCER OF AG-4 1 -0.61 0.32 -0.29
41 AT3G58810 metal tolerance protein A2 ARABIDOPSIS METAL TOLERANCE
PROTEIN 3, ATMTPA2, METAL
TOLERANCE PROTEIN 3, metal
tolerance protein A2		 -0.61 0.31 -0.33
42 AT2G39300 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G55060.1); Has 46416 Blast
hits to 28308 proteins in 1743 species: Archae - 734;
Bacteria - 4822; Metazoa - 24446; Fungi - 3539; Plants -
2267; Viruses - 163; Other Eukaryotes - 10445 (source: NCBI
BLink).		 -0.61 0.32 -0.31
43 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 -0.61 0.33 -0.31
44 AT3G43300 HOPM interactor 7 HOPM interactor 7, BFA-VISUALIZED
ENDOCYTIC TRAFFICKING DEFECTIVE1		 -0.61 0.31 -0.33
45 AT5G41770 crooked neck protein, putative / cell cycle protein,
putative		 -0.6 0.33 -0.32
46 AT1G06440 Ubiquitin carboxyl-terminal hydrolase family protein -0.6 0.32 -0.3
47 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 -0.6 0.32 -0.34
48 AT1G76950 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 PRAF1 -0.6 0.33 -0.32
49 AT1G68940 Armadillo/beta-catenin-like repeat family protein -0.6 0.29 -0.32
50 AT3G44530 homolog of histone chaperone HIRA homolog of histone chaperone HIRA -0.6 0.3 -0.3
51 AT1G47240 NRAMP metal ion transporter 2 ATNRAMP2, NRAMP metal ion
transporter 2		 -0.6 0.33 -0.32
52 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein -0.6 0.32 -0.33
53 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 -0.6 0.36 -0.3
54 AT2G17270 phosphate transporter 3;3 phosphate transporter 3;3 -0.6 0.31 -0.3
55 AT4G24210 F-box family protein SLEEPY1 0.6 0.31 -0.32
56 AT1G34550 Protein of unknown function (DUF616) EMBRYO DEFECTIVE 2756 -0.6 0.3 -0.32
57 AT4G09630 Protein of unknown function (DUF616) -0.6 0.31 -0.32
58 AT2G16920 ubiquitin-conjugating enzyme 23 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 2, ubiquitin-conjugating
enzyme 23		 -0.6 0.33 -0.34
59 AT5G06720 peroxidase 2 peroxidase 2, peroxidase 2 0.6 0.3 -0.31
60 AT5G66500 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.3 -0.31
61 AT3G03980 NAD(P)-binding Rossmann-fold superfamily protein 0.59 0.31 -0.32
62 AT3G03910 glutamate dehydrogenase 3 glutamate dehydrogenase 3 -0.59 0.3 -0.32
63 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.31 -0.32
64 AT3G11960 Cleavage and polyadenylation specificity factor (CPSF) A
subunit protein		 -0.59 0.3 -0.32
65 AT2G32250 FAR1-related sequence 2 FAR1-related sequence 2 -0.59 0.33 -0.31
66 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 0.59 0.32 -0.3
67 AT4G10280 RmlC-like cupins superfamily protein 0.59 0.31 -0.31
68 AT2G06630 transposable element gene -0.58 0.32 -0.31
69 AT3G62800 double-stranded-RNA-binding protein 4 double-stranded-RNA-binding
protein 4		 0.58 0.32 -0.31
70 AT2G04830 Protein of unknown function (DUF295) -0.58 0.33 -0.32
71 AT4G35550 WUSCHEL related homeobox 13 ATWOX13, HB-4, WUSCHEL related
homeobox 13		 0.58 0.31 -0.29
72 AT5G14430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.58 0.31 -0.32
73 AT3G58580 DNAse I-like superfamily protein -0.58 0.33 -0.3
74 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 0.58 0.3 -0.32
75 AT5G62865 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G48020.1).		 -0.58 0.3 -0.33
76 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 0.58 0.31 -0.3
77 AT1G31470 Major facilitator superfamily protein NUCLEAR FUSION DEFECTIVE 4 -0.57 0.29 -0.33
78 AT1G55700 Cysteine/Histidine-rich C1 domain family protein -0.57 0.3 -0.3
79 AT1G48120 hydrolases;protein serine/threonine phosphatases -0.57 0.34 -0.31
80 AT3G15980 Coatomer, beta' subunit -0.57 0.34 -0.31
81 AT5G12100 pentatricopeptide (PPR) repeat-containing protein -0.57 0.3 -0.32
82 AT5G04980 DNAse I-like superfamily protein -0.57 0.32 -0.32
83 AT4G38200 SEC7-like guanine nucleotide exchange family protein -0.57 0.31 -0.29
84 AT3G42120 transposable element gene -0.57 0.31 -0.33
85 AT2G15720 transposable element gene -0.57 0.32 -0.31
86 AT1G74300 alpha/beta-Hydrolases superfamily protein 0.57 0.31 -0.34
87 AT5G53960 ATP binding;DNA binding;DNA topoisomerase
(ATP-hydrolyzing)s		 -0.56 0.3 -0.32
88 AT3G23900 RNA recognition motif (RRM)-containing protein -0.56 0.32 -0.31
89 AT5G50410 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.34 -0.32
90 AT5G01280 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.32 -0.33
91 AT3G20550 SMAD/FHA domain-containing protein DAWDLE 0.56 0.31 -0.32
92 AT5G45790 Ubiquitin carboxyl-terminal hydrolase family protein 0.56 0.32 -0.32
93 AT1G69630 F-box/RNI-like superfamily protein 0.56 0.29 -0.31
94 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 -0.56 0.31 -0.31
95 AT3G60680 Plant protein of unknown function (DUF641) -0.56 0.3 -0.31
96 AT5G32470 Haem oxygenase-like, multi-helical -0.56 0.3 -0.32
97 AT5G51800 Protein kinase superfamily protein 0.56 0.33 -0.29
98 AT3G56930 DHHC-type zinc finger family protein -0.56 0.31 -0.32
99 AT4G25950 vacuolar ATP synthase G3 vacuolar ATP synthase G3 -0.56 0.32 -0.33
100 AT1G15050 indole-3-acetic acid inducible 34 indole-3-acetic acid inducible 34 -0.56 0.32 -0.31
101 AT2G44170 pseudogene, myristoyl-CoA:protein N-myristoyltransferase
(NMT), putative, similar to N-myristoyltransferase 1 (NMT1)
(Arabidopsis thaliana) GI:7339834; contains Pfam profiles
PF01233: Myristoyl-CoA:protein N-myristoyltransferase
N-terminal domain, PF02799: Myristoyl-CoA:protein
N-myristoyltransferase C-terminal domain; gene contains a
frameshift. This could be a pseudogene or a sequencing
error.; blastp match of 62% identity and 5.1e-121 P-value
to GP|20804654|dbj|BAB92343.1||AP003273 putative
N-myristoyl transferase {Oryza sativa (japonica
cultivar-group)}		 ARABIDOPSIS N-MYRISTOYLTRANSFERASE
2, N-myristoyltransferase 2		 -0.56 0.33 -0.33
102 AT3G60860 SEC7-like guanine nucleotide exchange family protein -0.56 0.33 -0.32
103 AT1G47720 Primosome PriB/single-strand DNA-binding Organellar Single-stranded -0.56 0.32 -0.32
104 AT3G13870 Root hair defective 3 GTP-binding protein (RHD3) GOLGI MUTANT 8, ROOT HAIR
DEFECTIVE 3		 -0.55 0.32 -0.32
105 AT3G17890 unknown protein; Has 31 Blast hits to 31 proteins in 12
species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 10;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.55 0.31 -0.3
106 AT1G13410 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.32 -0.3
107 AT3G51940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03990.1); Has 215 Blast hits
to 164 proteins in 38 species: Archae - 0; Bacteria - 35;
Metazoa - 16; Fungi - 18; Plants - 121; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.55 0.32 -0.34
108 AT5G53635 F-box/RNI-like/FBD-like domains-containing protein -0.55 0.3 -0.31
109 AT5G14400 cytochrome P450, family 724, subfamily A, polypeptide 1 cytochrome P450, family 724,
subfamily A, polypeptide 1		 0.55 0.31 -0.33
110 AT4G16420 homolog of yeast ADA2 2B homolog of yeast ADA2 2B, PROPORZ1 0.55 0.31 -0.31
111 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3		 -0.55 0.3 -0.31
112 AT3G03810 O-fucosyltransferase family protein embryo sac development arrest 30 -0.55 0.31 -0.33
113 AT1G53165 Protein kinase superfamily protein ATMAP4K ALPHA1 -0.55 0.31 -0.3
114 AT3G58050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast
hits to 8116 proteins in 546 species: Archae - 41; Bacteria
- 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses
- 46; Other Eukaryotes - 4915 (source: NCBI BLink).		 -0.55 0.32 -0.3
115 AT2G02350 SKP1 interacting partner 3 Phloem protein 2-B9, SKP1
interacting partner 3		 0.55 0.34 -0.31
116 AT3G32300 transposable element gene 0.55 0.35 -0.32
117 AT3G23010 receptor like protein 36 receptor like protein 36, receptor
like protein 36		 0.54 0.31 -0.32
118 AT5G11780 unknown protein; Has 37 Blast hits to 37 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.31 -0.3