AGICode | AT3G62350 |
Description | BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G71320.1); Has 136 Blast hits to 136 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G62350 | BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G71320.1); Has 136 Blast hits to 136 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
1 | 0.32 | -0.32 | |||
2 | AT1G54470 | RNI-like superfamily protein | resistance to Peronospora parasitica 27 |
0.69 | 0.32 | -0.32 | ||
3 | AT1G20120 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.62 | 0.32 | -0.32 | |||
4 | AT3G28770 | Protein of unknown function (DUF1216) | 0.61 | 0.31 | -0.3 | |||
5 | AT2G04890 | SCARECROW-like 21 | SCARECROW-like 21 | 0.61 | 0.31 | -0.31 | ||
6 | AT1G09720 | Kinase interacting (KIP1-like) family protein | -0.61 | 0.33 | -0.3 | |||
7 | AT5G12120 | Ubiquitin-associated/translation elongation factor EF1B protein |
0.61 | 0.31 | -0.3 | |||
8 | AT1G10200 | GATA type zinc finger transcription factor family protein | WLIM1 | 0.6 | 0.33 | -0.33 | ||
9 | AT5G48330 | Regulator of chromosome condensation (RCC1) family protein | RCC1/UVR8/GEF-like 2 | 0.59 | 0.34 | -0.32 | ||
10 | AT4G02190 | Cysteine/Histidine-rich C1 domain family protein | 0.59 | 0.29 | -0.3 | |||
11 | AT4G13090 | xyloglucan endotransglucosylase/hydrolase 2 | xyloglucan endotransglucosylase/hydrolase 2 |
0.58 | 0.32 | -0.3 | ||
12 | AT1G14470 | Pentatricopeptide repeat (PPR) superfamily protein | 0.57 | 0.32 | -0.32 | |||
13 | AT3G02890 | RING/FYVE/PHD zinc finger superfamily protein | -0.57 | 0.31 | -0.31 | |||
14 | AT3G28260 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
-0.55 | 0.33 | -0.31 | |||
15 | AT2G04720 | pseudogene, GTP-binding protein -related, similar to GTP-binding protein GI:6624302 from (Carica papaya); blastp match of 60% identity and 5.0e-31 P-value to GP|6624302|dbj|BAA88497.1||AB035919 small GTP-binding protein {Carica papaya} |
0.55 | 0.3 | -0.31 | |||
16 | AT1G05120 | Helicase protein with RING/U-box domain | -0.55 | 0.33 | -0.33 | |||
17 | AT5G65560 | Pentatricopeptide repeat (PPR) superfamily protein | -0.54 | 0.3 | -0.34 | |||
18 | AT1G03750 | switch 2 | CHROMATIN REMODELING 9 | -0.54 | 0.31 | -0.32 | ||
19 | AT3G61740 | SET domain protein 14 | ATX3, SET domain protein 14 | -0.54 | 0.34 | -0.32 | ||
20 | AT5G45180 | Flavin-binding monooxygenase family protein | -0.54 | 0.31 | -0.31 | |||
21 | AT3G61300 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
0.54 | 0.32 | -0.32 | |||
22 | AT3G57100 | Protein of unknown function (DUF677) | 0.53 | 0.32 | -0.3 | |||
23 | AT5G24860 | flowering promoting factor 1 | ARABIDOPSIS FLOWERING PROMOTING FACTOR 1, FLOWERING PROMOTING FACTOR 1 |
-0.53 | 0.3 | -0.3 | ||
24 | AT1G48390 | RNI-like superfamily protein | 0.53 | 0.31 | -0.31 | |||
25 | AT3G42340 | transposable element gene | 0.52 | 0.29 | -0.31 | |||
26 | AT2G34980 | phosphatidylinositolglycan synthase family protein | SETH1 | -0.52 | 0.32 | -0.31 | ||
27 | AT2G13920 | pseudogene, CHP-rich zinc finger protein, putative, contains weak PHD zinc finger motifscontains weak PHD zinc finger motifsDC1 domain, a divergent protein kinase C domain of unknown function. |
0.52 | 0.31 | -0.35 | |||
28 | AT5G40820 | Ataxia telangiectasia-mutated and RAD3-related | ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related, ATRAD3 |
-0.52 | 0.32 | -0.31 | ||
29 | AT1G60450 | galactinol synthase 7 | galactinol synthase 7, galactinol synthase 7 |
-0.52 | 0.31 | -0.32 | ||
30 | AT3G58740 | citrate synthase 1 | citrate synthase 1 | -0.52 | 0.33 | -0.31 | ||
31 | AT1G75940 | Glycosyl hydrolase superfamily protein | ATA27, BETA GLUCOSIDASE 20 | 0.51 | 0.33 | -0.31 | ||
32 | AT3G43820 | pseudogene, copper amine oxidase protein family, similar to SP|Q43077 Amine oxidase (copper-containing) precursor (EC 1.4.3.6) {Pisum sativum}; contains Pfam profile PF01179: Copper amine oxidase, enzyme domain; blastp match of 57% identity and 2.6e-48 P-value to GP|5733089|gb|AAD49420.1|AF172681_1|AF172681 amine oxidase {Canavalia lineata} |
-0.51 | 0.3 | -0.32 | |||
33 | AT5G55750 | hydroxyproline-rich glycoprotein family protein | -0.51 | 0.31 | -0.32 | |||
34 | AT1G73910 | actin-related proteins 4A | actin-related proteins 4A, actin-related proteins 4A |
0.5 | 0.32 | -0.3 | ||
35 | ATMG00050 | hypothetical protein | ORF131 | 0.5 | 0.31 | -0.31 | ||
36 | AT3G42160 | Pectin lyase-like superfamily protein | -0.5 | 0.33 | -0.29 | |||
37 | AT2G33010 | Ubiquitin-associated (UBA) protein | 0.5 | 0.32 | -0.31 | |||
38 | AT5G28810 | Domain of unknown function (DUF1985) | 0.49 | 0.32 | -0.31 | |||
39 | AT4G38830 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26 |
0.49 | 0.3 | -0.32 | ||
40 | AT4G11300 | Protein of unknown function (DUF793) | 0.49 | 0.32 | -0.3 | |||
41 | AT2G29000 | Leucine-rich repeat protein kinase family protein | -0.49 | 0.32 | -0.31 | |||
42 | AT1G78980 | STRUBBELIG-receptor family 5 | STRUBBELIG-receptor family 5 | 0.49 | 0.32 | -0.3 | ||
43 | AT3G57270 | beta-1,3-glucanase 1 | beta-1,3-glucanase 1 | 0.49 | 0.33 | -0.34 | ||
44 | AT4G35970 | ascorbate peroxidase 5 | ascorbate peroxidase 5 | -0.48 | 0.32 | -0.31 | ||
45 | AT3G12900 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.48 | 0.32 | -0.3 | |||
46 | AT2G17210 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.47 | 0.31 | -0.32 | |||
47 | AT1G60540 | pseudogene of the dynamin family | Dynamin related protein 4B | -0.47 | 0.31 | -0.31 |