AGICode | AT3G62050 |
Description | Putative endonuclease or glycosyl hydrolase |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G62050 | Putative endonuclease or glycosyl hydrolase | 1 | 0.31 | -0.3 | |||
2 | AT4G33090 | aminopeptidase M1 | aminopeptidase M1, AMINOPEPTIDASE M1 |
-0.82 | 0.32 | -0.32 | ||
3 | AT2G26920 | Ubiquitin-associated/translation elongation factor EF1B protein |
-0.82 | 0.31 | -0.32 | |||
4 | AT3G48020 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.8 | 0.32 | -0.32 | |||
5 | AT5G04620 | biotin F | biotin F, biotin 4, biotin F | 0.79 | 0.32 | -0.32 | ||
6 | AT5G49950 | alpha/beta-Hydrolases superfamily protein | -0.79 | 0.32 | -0.31 | |||
7 | AT1G26100 | Cytochrome b561/ferric reductase transmembrane protein family |
0.79 | 0.32 | -0.34 | |||
8 | AT2G37860 | Protein of unknown function (DUF3411) | LOWER CELL DENSITY 1 | 0.78 | 0.3 | -0.32 | ||
9 | AT1G32960 | Subtilase family protein | ATSBT3.3, SBT3.3 | -0.78 | 0.29 | -0.3 | ||
10 | AT1G48370 | YELLOW STRIPE like 8 | YELLOW STRIPE like 8 | -0.78 | 0.33 | -0.3 | ||
11 | AT5G11690 | translocase inner membrane subunit 17-3 | ARABIDOPSIS THALIANA TRANSLOCASE INNER MEMBRANE SUBUNIT 17-3, translocase inner membrane subunit 17-3 |
0.78 | 0.32 | -0.31 | ||
12 | AT4G36760 | aminopeptidase P1 | aminopeptidase P1, ARABIDOPSIS THALIANA AMINOPEPTIDASE P1 |
-0.77 | 0.35 | -0.34 | ||
13 | AT1G03820 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to 1122 proteins in 102 species: Archae - 2; Bacteria - 28; Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other Eukaryotes - 1148 (source: NCBI BLink). |
0.77 | 0.3 | -0.32 | |||
14 | AT3G45160 | Putative membrane lipoprotein | 0.77 | 0.31 | -0.31 | |||
15 | AT2G41600 | Mitochondrial glycoprotein family protein | 0.76 | 0.32 | -0.32 | |||
16 | AT4G35790 | phospholipase D delta | ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA, phospholipase D delta |
-0.76 | 0.31 | -0.32 | ||
17 | AT2G18090 | PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein |
-0.76 | 0.31 | -0.32 | |||
18 | AT5G66000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17540.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.76 | 0.33 | -0.33 | |||
19 | AT3G48000 | aldehyde dehydrogenase 2B4 | aldehyde dehydrogenase 2, aldehyde dehydrogenase 2A, aldehyde dehydrogenase 2B4 |
-0.76 | 0.3 | -0.31 | ||
20 | AT1G20580 | Small nuclear ribonucleoprotein family protein | 0.76 | 0.3 | -0.32 | |||
21 | AT5G15460 | membrane-anchored ubiquitin-fold protein 2 | membrane-anchored ubiquitin-fold protein 2 |
0.76 | 0.32 | -0.32 | ||
22 | AT5G50380 | exocyst subunit exo70 family protein F1 | exocyst subunit exo70 family protein F1, exocyst subunit exo70 family protein F1 |
-0.75 | 0.33 | -0.3 | ||
23 | AT4G05400 | copper ion binding | 0.75 | 0.31 | -0.34 | |||
24 | AT4G16760 | acyl-CoA oxidase 1 | acyl-CoA oxidase 1, ATACX1 | -0.75 | 0.33 | -0.29 | ||
25 | AT4G36040 | Chaperone DnaJ-domain superfamily protein | DnaJ11 | -0.75 | 0.32 | -0.32 | ||
26 | AT1G63010 | Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein |
-0.75 | 0.34 | -0.31 | |||
27 | AT5G16820 | heat shock factor 3 | ARABIDOPSIS HEAT SHOCK FACTOR 3, ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1B, heat shock factor 3, CLASS A HEAT SHOCK FACTOR 1B |
-0.75 | 0.31 | -0.31 | ||
28 | AT1G80050 | adenine phosphoribosyl transferase 2 | adenine phosphoribosyl transferase 2, ATAPT2, PHT1.1 |
0.75 | 0.3 | -0.33 | ||
29 | AT5G09620 | Octicosapeptide/Phox/Bem1p family protein | -0.75 | 0.31 | -0.34 | |||
30 | AT3G56480 | myosin heavy chain-related | 0.75 | 0.34 | -0.31 | |||
31 | AT4G24780 | Pectin lyase-like superfamily protein | 0.74 | 0.32 | -0.31 | |||
32 | AT3G12690 | AGC kinase 1.5 | AGC kinase 1.5 | 0.74 | 0.32 | -0.31 | ||
33 | AT1G53320 | tubby like protein 7 | tubby like protein 7, tubby like protein 7 |
-0.74 | 0.32 | -0.3 | ||
34 | AT3G46490 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.74 | 0.3 | -0.31 | |||
35 | AT2G42380 | Basic-leucine zipper (bZIP) transcription factor family protein |
ATBZIP34, BZIP34 | 0.74 | 0.33 | -0.32 | ||
36 | AT1G75980 | Single hybrid motif superfamily protein | 0.74 | 0.28 | -0.3 | |||
37 | AT3G12400 | Ubiquitin-conjugating enzyme/RWD-like protein | ATELC, ELC | -0.74 | 0.31 | -0.31 | ||
38 | AT5G01470 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.73 | 0.32 | -0.32 | |||
39 | AT3G54200 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.73 | 0.34 | -0.33 | |||
40 | AT4G02370 | Protein of unknown function, DUF538 | -0.73 | 0.3 | -0.33 | |||
41 | AT2G37580 | RING/U-box superfamily protein | -0.73 | 0.33 | -0.3 | |||
42 | AT3G07580 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48335.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.73 | 0.32 | -0.34 | |||
43 | AT2G18170 | MAP kinase 7 | MAP kinase 7, MAP kinase 7 | -0.73 | 0.3 | -0.31 | ||
44 | AT5G14590 | Isocitrate/isopropylmalate dehydrogenase family protein | -0.72 | 0.34 | -0.32 | |||
45 | AT4G31420 | Zinc finger protein 622 | -0.72 | 0.32 | -0.32 | |||
46 | AT1G34065 | S-adenosylmethionine carrier 2 | S-adenosylmethionine carrier 2 | 0.72 | 0.35 | -0.3 | ||
47 | AT1G32130 | Transcription elongation factor (TFIIS) family protein | ARABIDOPSIS THALIANA IWS1 (FROM YEAST INTERACTS WITH SPT6), HIGH NITROGEN INSENSITIVE 9, IWS1 |
-0.72 | 0.32 | -0.34 | ||
48 | AT1G78530 | Protein kinase superfamily protein | 0.72 | 0.29 | -0.3 | |||
49 | AT1G65580 | Endonuclease/exonuclease/phosphatase family protein | FRAGILE FIBER3 | -0.72 | 0.31 | -0.32 | ||
50 | AT3G10800 | Basic-leucine zipper (bZIP) transcription factor family protein |
BZIP28 | -0.72 | 0.32 | -0.32 | ||
51 | AT5G13200 | GRAM domain family protein | -0.72 | 0.32 | -0.31 | |||
52 | AT4G22980 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits to 468 proteins in 130 species: Archae - 5; Bacteria - 23; Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). |
-0.72 | 0.3 | -0.32 | |||
53 | AT5G01910 | unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.72 | 0.33 | -0.32 | |||
54 | AT3G06540 | Rab escort protein | AthREP, Rab escort protein | -0.72 | 0.3 | -0.33 | ||
55 | AT2G46570 | laccase 6 | laccase 6 | 0.72 | 0.31 | -0.31 | ||
56 | AT5G44900 | Toll-Interleukin-Resistance (TIR) domain family protein | 0.71 | 0.3 | -0.32 | |||
57 | AT3G49750 | receptor like protein 44 | receptor like protein 44, receptor like protein 44 |
0.71 | 0.31 | -0.31 | ||
58 | AT1G52320 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 517 Blast hits to 513 proteins in 62 species: Archae - 6; Bacteria - 6; Metazoa - 50; Fungi - 2; Plants - 427; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). |
-0.71 | 0.34 | -0.31 | |||
59 | AT4G27990 | YGGT family protein | ATYLMG1-2, YLMG1-2 | -0.71 | 0.33 | -0.32 | ||
60 | AT3G53190 | Pectin lyase-like superfamily protein | 0.71 | 0.31 | -0.32 | |||
61 | AT2G22260 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | 0.71 | 0.31 | -0.31 | |||
62 | AT5G14610 | DEAD box RNA helicase family protein | 0.71 | 0.33 | -0.3 | |||
63 | AT1G48960 | Adenine nucleotide alpha hydrolases-like superfamily protein |
0.71 | 0.32 | -0.33 | |||
64 | AT2G33700 | Protein phosphatase 2C family protein | -0.71 | 0.3 | -0.31 | |||
65 | AT1G49670 | ARP protein (REF) | NQR | -0.7 | 0.31 | -0.31 | ||
66 | AT5G11210 | glutamate receptor 2.5 | ARABIDOPSIS THALIANA GLU, glutamate receptor 2.5 |
-0.7 | 0.31 | -0.32 | ||
67 | AT4G34390 | extra-large GTP-binding protein 2 | extra-large GTP-binding protein 2 | -0.7 | 0.31 | -0.31 | ||
68 | AT5G19420 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
-0.7 | 0.31 | -0.3 | |||
69 | AT2G22010 | related to KPC1 | related to KPC1 | -0.7 | 0.32 | -0.31 | ||
70 | AT4G13270 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.7 | 0.33 | -0.31 | |||
71 | AT5G55260 | protein phosphatase X 2 | PROTEIN PHOSPHATASE X -2, protein phosphatase X 2 |
0.7 | 0.31 | -0.29 | ||
72 | AT4G13990 | Exostosin family protein | 0.7 | 0.33 | -0.31 | |||
73 | AT5G57630 | CBL-interacting protein kinase 21 | CBL-interacting protein kinase 21, SNF1-RELATED PROTEIN KINASE 3.4 |
-0.7 | 0.31 | -0.32 | ||
74 | AT4G18160 | Ca2+ activated outward rectifying K+ channel 6 | CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6, ATTPK3, Ca2+ activated outward rectifying K+ channel 6, TPK3 |
-0.69 | 0.31 | -0.31 | ||
75 | AT1G15230 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 26 Blast hits to 26 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.29 | -0.33 | |||
76 | AT3G52240 | unknown protein; Has 220 Blast hits to 193 proteins in 66 species: Archae - 0; Bacteria - 15; Metazoa - 53; Fungi - 33; Plants - 66; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). |
-0.69 | 0.31 | -0.34 | |||
77 | AT2G39700 | expansin A4 | ATEXP4, expansin A4, ATHEXP ALPHA 1.6, expansin A4 |
0.69 | 0.31 | -0.34 | ||
78 | AT4G17340 | tonoplast intrinsic protein 2;2 | DELTA-TIP2, tonoplast intrinsic protein 2;2 |
0.69 | 0.31 | -0.29 | ||
79 | AT1G27200 | Domain of unknown function (DUF23) | -0.69 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
80 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
-0.7 | 0.32 | -0.31 |