AT3G61950 : -
Query Information
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AGICode AT3G61950
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G61950 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 1 0.32 -0.3
2 AT3G18050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits
to 66 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.9 0.3 -0.3
3 AT1G03630 protochlorophyllide oxidoreductase C protochlorophyllide oxidoreductase
C, PORC		 0.9 0.33 -0.29
4 AT5G57030 Lycopene beta/epsilon cyclase protein LUTEIN DEFICIENT 2 0.9 0.32 -0.32
5 AT2G35260 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17840.1); Has 42 Blast
hits to 42 proteins in 14 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.89 0.31 -0.29
6 AT3G08940 light harvesting complex photosystem II light harvesting complex
photosystem II		 0.88 0.31 -0.35
7 AT1G52230 photosystem I subunit H2 PHOTOSYSTEM I SUBUNIT H-2,
photosystem I subunit H2, PSI-H		 0.88 0.31 -0.31
8 AT5G20935 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF3148 (InterPro:IPR021495); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.88 0.31 -0.3
9 AT2G46820 photosystem I P subunit PSAP, photosystem I P subunit,
PLASTID TRANSCRIPTIONALLY ACTIVE
8, THYLAKOID MEMBRANE
PHOSPHOPROTEIN OF 14 KDA		 0.87 0.31 -0.32
10 AT1G49750 Leucine-rich repeat (LRR) family protein 0.86 0.35 -0.31
11 AT1G15260 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits
to 28 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.86 0.33 -0.31
12 AT1G07440 NAD(P)-binding Rossmann-fold superfamily protein 0.86 0.32 -0.32
13 AT4G39270 Leucine-rich repeat protein kinase family protein -0.85 0.33 -0.3
14 AT4G27440 protochlorophyllide oxidoreductase B protochlorophyllide oxidoreductase
B		 0.85 0.32 -0.31
15 AT4G03210 xyloglucan endotransglucosylase/hydrolase 9 xyloglucan
endotransglucosylase/hydrolase 9		 0.85 0.35 -0.31
16 AT5G19440 NAD(P)-binding Rossmann-fold superfamily protein -0.85 0.3 -0.32
17 AT3G16000 MAR binding filament-like protein 1 MAR binding filament-like protein
1		 0.85 0.34 -0.32
18 AT5G09440 EXORDIUM like 4 EXORDIUM like 4 -0.85 0.29 -0.3
19 AT1G66430 pfkB-like carbohydrate kinase family protein 0.85 0.29 -0.34
20 AT4G38430 rho guanyl-nucleotide exchange factor 1 ATROPGEF1, rho guanyl-nucleotide
exchange factor 1		 0.84 0.31 -0.31
21 AT2G01760 response regulator 14 response regulator 14, response
regulator 14		 0.84 0.34 -0.33
22 AT1G50280 Phototropic-responsive NPH3 family protein 0.84 0.32 -0.3
23 AT2G28950 expansin A6 ARABIDOPSIS THALIANA TEXPANSIN 6,
expansin A6, ATHEXP ALPHA 1.8,
expansin A6		 0.84 0.33 -0.31
24 AT2G03750 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.84 0.3 -0.3
25 AT1G31335 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 34 Blast hits to 34 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.84 0.32 -0.33
26 AT4G37080 Protein of unknown function, DUF547 0.84 0.31 -0.32
27 AT5G59350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.84 0.32 -0.32
28 AT2G47920 Kinase interacting (KIP1-like) family protein 0.84 0.33 -0.31
29 AT3G47730 ATP-binding cassette A2 ATP-binding cassette A2, A.
THALIANA ABC2 HOMOLOG 1, ABC2
homolog 1		 -0.83 0.3 -0.3
30 AT1G17140 interactor of constitutive active rops 1 interactor of constitutive active
rops 1, ROP INTERACTIVE PARTNER 1		 0.83 0.29 -0.31
31 AT1G55260 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.83 0.32 -0.33
32 AT2G20725 CAAX amino terminal protease family protein 0.83 0.32 -0.31
33 AT5G01920 Protein kinase superfamily protein State transition 8 0.83 0.29 -0.32
34 AT1G11300 protein serine/threonine kinases;protein kinases;ATP
binding;sugar binding;kinases;carbohydrate binding		 0.83 0.31 -0.31
35 AT4G39330 cinnamyl alcohol dehydrogenase 9 ATCAD9, cinnamyl alcohol
dehydrogenase 9		 0.83 0.3 -0.3
36 AT5G13730 sigma factor 4 sigma factor 4, SIGD 0.83 0.31 -0.3
37 AT3G18860 transducin family protein / WD-40 repeat family protein -0.83 0.32 -0.32
38 AT2G14120 dynamin related protein dynamin related protein -0.83 0.29 -0.32
39 AT1G27120 Galactosyltransferase family protein 0.83 0.31 -0.31
40 AT5G35790 glucose-6-phosphate dehydrogenase 1 glucose-6-phosphate dehydrogenase
1		 0.83 0.32 -0.29
41 AT3G32930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.83 0.31 -0.32
42 AT5G07240 IQ-domain 24 IQ-domain 24 0.83 0.29 -0.31
43 AT1G65900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to
306 proteins in 119 species: Archae - 19; Bacteria - 238;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.83 0.29 -0.31
44 AT3G59060 phytochrome interacting factor 3-like 6 PHYTOCHROME-INTERACTING FACTOR 5,
phytochrome interacting factor
3-like 6		 0.82 0.31 -0.29
45 AT5G27550 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.82 0.32 -0.29
46 AT1G51420 sucrose-phosphatase 1 SUCROSE-PHOSPHATASE 1,
sucrose-phosphatase 1		 -0.82 0.32 -0.31
47 AT1G76100 plastocyanin 1 plastocyanin 1 0.82 0.31 -0.3
48 AT3G14990 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog A, DJ-1 homolog A -0.82 0.31 -0.31
49 AT1G14700 purple acid phosphatase 3 ATPAP3, purple acid phosphatase 3 0.82 0.31 -0.32
50 AT5G48410 glutamate receptor 1.3 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 1.3, glutamate receptor
1.3		 -0.82 0.32 -0.31
51 AT1G03130 photosystem I subunit D-2 photosystem I subunit D-2 0.82 0.32 -0.32
52 AT4G08685 Pollen Ole e 1 allergen and extensin family protein SAH7 0.82 0.29 -0.31
53 AT2G35760 Uncharacterised protein family (UPF0497) 0.82 0.32 -0.34
54 AT2G37390 Chloroplast-targeted copper chaperone protein SODIUM POTASSIUM ROOT DEFECTIVE 2 0.82 0.31 -0.33
55 AT1G75450 cytokinin oxidase 5 ARABIDOPSIS THALIANA CYTOKININ
OXIDASE 5, CYTOKININ OXIDASE 6,
cytokinin oxidase 5		 -0.82 0.31 -0.32
56 AT3G04290 Li-tolerant lipase 1 ATLTL1, Li-tolerant lipase 1 0.82 0.32 -0.33
57 AT2G15050 lipid transfer protein lipid transfer protein, lipid
transfer protein 7		 0.82 0.32 -0.32
58 AT4G38950 ATP binding microtubule motor family protein 0.82 0.32 -0.31
59 AT5G47500 Pectin lyase-like superfamily protein pectin methylesterase 5 0.82 0.33 -0.3
60 AT1G66970 SHV3-like 2 Glycerophosphodiester
phosphodiesterase (GDPD) like 1,
SHV3-like 2		 0.82 0.31 -0.31
61 AT4G19530 disease resistance protein (TIR-NBS-LRR class) family 0.82 0.31 -0.33
62 AT2G21210 SAUR-like auxin-responsive protein family 0.82 0.34 -0.31
63 AT4G01870 tolB protein-related -0.81 0.31 -0.32
64 AT5G07440 glutamate dehydrogenase 2 glutamate dehydrogenase 2 -0.81 0.32 -0.34
65 AT4G05020 NAD(P)H dehydrogenase B2 NAD(P)H dehydrogenase B2 -0.81 0.28 -0.3
66 AT5G12880 proline-rich family protein -0.81 0.32 -0.31
67 AT1G29330 ER lumen protein retaining receptor family protein ARABIDOPSIS ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ARABIDOPSIS
THALIANA ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ENDOPLASMIC
RETICULUM RETENTION DEFECTIVE 2		 -0.81 0.32 -0.3
68 AT1G25500 Plasma-membrane choline transporter family protein -0.81 0.29 -0.29
69 AT2G29065 GRAS family transcription factor -0.81 0.32 -0.32
70 AT3G24170 glutathione-disulfide reductase glutathione-disulfide reductase,
glutathione-disulfide reductase		 -0.8 0.32 -0.31
71 AT3G22290 Endoplasmic reticulum vesicle transporter protein -0.8 0.3 -0.3
72 AT3G55410 2-oxoglutarate dehydrogenase, E1 component -0.8 0.33 -0.33
73 AT1G79710 Major facilitator superfamily protein -0.8 0.33 -0.31
74 AT2G02870 Galactose oxidase/kelch repeat superfamily protein -0.8 0.31 -0.31
75 AT5G55200 Co-chaperone GrpE family protein mitochondrial GrpE 1 -0.8 0.32 -0.3
76 AT5G63905 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 12 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.8 0.3 -0.29
77 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8		 -0.79 0.3 -0.31
78 AT2G47000 ATP binding cassette subfamily B4 ATP-binding cassette B4,
ARABIDOPSIS P-GLYCOPROTEIN 4,
MULTIDRUG RESISTANCE 4,
P-GLYCOPROTEIN 4		 -0.79 0.31 -0.3
79 AT1G78420 RING/U-box superfamily protein -0.79 0.32 -0.34
80 AT1G32690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35200.1); Has 45 Blast
hits to 45 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.79 0.3 -0.31
81 AT2G18090 PHD finger family protein / SWIB complex BAF60b
domain-containing protein / GYF domain-containing protein		 -0.79 0.33 -0.3
82 AT5G16910 cellulose-synthase like D2 ATCSLD2, cellulose-synthase like
D2		 -0.79 0.3 -0.31
83 AT3G52200 Dihydrolipoamide acetyltransferase, long form protein LTA3 -0.79 0.32 -0.3
84 AT2G34070 TRICHOME BIREFRINGENCE-LIKE 37 TRICHOME BIREFRINGENCE-LIKE 37 -0.79 0.34 -0.32
85 AT3G22850 Aluminium induced protein with YGL and LRDR motifs -0.79 0.33 -0.31
86 AT4G25390 Protein kinase superfamily protein -0.79 0.32 -0.32
87 AT5G66760 succinate dehydrogenase 1-1 succinate dehydrogenase 1-1 -0.79 0.3 -0.31
88 AT1G10410 Protein of unknown function (DUF1336) -0.79 0.3 -0.32
89 AT1G17180 glutathione S-transferase TAU 25 glutathione S-transferase TAU 25,
glutathione S-transferase TAU 25		 -0.78 0.32 -0.3
90 AT3G61930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion stage;
Has 11 Blast hits to 11 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.32 -0.32
91 AT1G08940 Phosphoglycerate mutase family protein -0.78 0.32 -0.33
92 AT5G38710 Methylenetetrahydrofolate reductase family protein -0.78 0.32 -0.32
93 AT1G64060 respiratory burst oxidase protein F respiratory burst oxidase protein
F, ARABIDOPSIS THALIANA
RESPIRATORY BURST OXIDASE HOMOLOG
F, respiratory burst oxidase
protein F, RBOHAP108, RESPIRATORY
BURST OXIDASE PROTEIN F		 -0.78 0.31 -0.32
94 AT4G38540 FAD/NAD(P)-binding oxidoreductase family protein -0.77 0.3 -0.31
95 AT2G35736 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G25225.1); Has 78 Blast hits to 78 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.77 0.32 -0.3
96 AT5G56090 cytochrome c oxidase 15 cytochrome c oxidase 15 -0.77 0.32 -0.32
97 AT2G29440 glutathione S-transferase tau 6 glutathione S-transferase tau 6,
GLUTATHIONE S-TRANSFERASE 24,
glutathione S-transferase tau 6		 -0.77 0.31 -0.33
98 AT1G64750 deletion of SUV3 suppressor 1(I) deletion of SUV3 suppressor 1(I),
deletion of SUV3 suppressor 1(I)		 -0.77 0.3 -0.31
99 AT5G50760 SAUR-like auxin-responsive protein family -0.77 0.33 -0.29
100 AT5G12290 dgd1 suppressor 1 DGD1 SUPPRESSOR 1 -0.76 0.32 -0.31
101 AT5G57300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.76 0.29 -0.32
102 AT1G24050 RNA-processing, Lsm domain -0.76 0.32 -0.31
103 AT5G58730 pfkB-like carbohydrate kinase family protein -0.76 0.35 -0.31
104 AT3G47780 ABC2 homolog 6 ATP-binding cassette A7, A.
THALIANA ABC2 HOMOLOG 6, ABC2
homolog 6		 -0.76 0.33 -0.31
105 AT1G44170 aldehyde dehydrogenase 3H1 aldehyde dehydrogenase 3H1,
aldehyde dehydrogenase 4		 -0.76 0.3 -0.34
106 AT3G49210 O-acyltransferase (WSD1-like) family protein -0.76 0.33 -0.33
107 AT1G16470 proteasome subunit PAB1 proteasome subunit PAB1 -0.75 0.33 -0.31
108 AT1G72280 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum
oxidoreductins 1, endoplasmic
reticulum oxidoreductins 1		 -0.75 0.31 -0.3
109 AT4G15610 Uncharacterised protein family (UPF0497) -0.75 0.3 -0.32
110 AT5G43100 Eukaryotic aspartyl protease family protein -0.74 0.3 -0.33
111 AT3G03050 cellulose synthase-like D3 CELLULOSE SYNTHASE LIKE D3,
cellulose synthase-like D3, KOJAK,
ROOT HAIR DEFECTIVE 7		 -0.74 0.32 -0.36
112 AT4G23470 PLAC8 family protein -0.74 0.33 -0.33
113 AT4G29690 Alkaline-phosphatase-like family protein -0.74 0.31 -0.31
114 AT3G03950 evolutionarily conserved C-terminal region 1 evolutionarily conserved
C-terminal region 1		 -0.74 0.31 -0.32
115 AT1G32170 xyloglucan endotransglucosylase/hydrolase 30 xyloglucan
endotransglucosylase/hydrolase 30,
xyloglucan endotransglycosylase 4		 -0.74 0.32 -0.3
116 AT5G61450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.74 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0182 MST_2996.4 - - - 0.87 0.45 -0.46
118 C0204 Phosphatidylglycerol-34:2 - Phosphatidylglycerol-34:2 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.84 0.43 -0.45 C0204
119 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - -0.82 0.46 -0.45 C0067