AT3G61140 : ARABIDOPSIS THALIANA FUSCA 6
Query Information
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AGICode AT3G61140
Description 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G61140 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 ARABIDOPSIS THALIANA FUSCA 6,
SHAGGY-LIKE KINASE 31,
CONSTITUTIVE PHOTOMORPHOGENIC 11,
COP9 SIGNALOSOME SUBUNIT 1, EMBRYO
DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE
KINASE 31		 1 0.31 -0.3
2 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 0.84 0.33 -0.34
3 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 0.84 0.32 -0.3
4 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.82 0.31 -0.33
5 AT3G55380 ubiquitin-conjugating enzyme 14 ubiquitin-conjugating enzyme 14 0.82 0.3 -0.32
6 AT1G66070 Translation initiation factor eIF3 subunit 0.81 0.34 -0.32
7 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.8 0.29 -0.3
8 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.8 0.3 -0.33
9 AT2G32380 Transmembrane protein 97, predicted 0.8 0.29 -0.3
10 AT1G76550 Phosphofructokinase family protein 0.79 0.3 -0.31
11 AT1G77750 Ribosomal protein S13/S18 family 0.79 0.34 -0.31
12 AT1G20950 Phosphofructokinase family protein 0.78 0.32 -0.31
13 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.78 0.33 -0.33
14 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.78 0.32 -0.29
15 AT3G06930 protein arginine methyltransferase 4B ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 4B,
protein arginine methyltransferase
4B		 0.77 0.3 -0.33
16 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.77 0.31 -0.32
17 AT2G36880 methionine adenosyltransferase 3 methionine adenosyltransferase 3 0.77 0.31 -0.33
18 AT2G46230 PIN domain-like family protein 0.76 0.32 -0.31
19 AT4G13940 S-adenosyl-L-homocysteine hydrolase S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE
1, EMBRYO DEFECTIVE 1395,
HOMOLOGY-DEPENDENT GENE SILENCING
1, MATERNAL EFFECT EMBRYO ARREST
58, S-ADENOSYL-L-HOMOCYSTEIN
HYDROLASE 1		 0.76 0.32 -0.31
20 AT5G16070 TCP-1/cpn60 chaperonin family protein 0.76 0.32 -0.3
21 AT3G16940 calmodulin binding;transcription regulators -0.75 0.31 -0.34
22 AT3G19450 GroES-like zinc-binding alcohol dehydrogenase family
protein		 ATCAD4, CAD, CAD-C, CINNAMYL
ALCOHOL DEHYDROGENASE 4		 0.75 0.33 -0.31
23 AT3G24740 Protein of unknown function (DUF1644) -0.75 0.32 -0.33
24 AT1G04690 potassium channel beta subunit 1 potassium channel beta subunit 1,
KV-BETA1		 0.75 0.31 -0.31
25 AT3G19760 eukaryotic initiation factor 4A-III eukaryotic initiation factor
4A-III		 0.75 0.31 -0.29
26 AT1G43710 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 embryo defective 1075 0.75 0.32 -0.32
27 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 0.74 0.31 -0.35
28 AT5G08160 serine/threonine protein kinase 3 serine/threonine protein kinase 3,
serine/threonine protein kinase 3		 0.74 0.31 -0.31
29 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 0.74 0.35 -0.32
30 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.74 0.32 -0.28
31 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR 0.74 0.32 -0.29
32 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 0.73 0.3 -0.29
33 AT3G18780 actin 2 actin 2, DEFORMED ROOT HAIRS 1,
ENHANCER OF LRX1 2, FRIZZY AND
KINKED SHOOTS 2, LIGHT
STRESS-REGULATED 2		 0.73 0.31 -0.34
34 AT3G07950 rhomboid protein-related 0.73 0.28 -0.32
35 AT4G34750 SAUR-like auxin-responsive protein family 0.73 0.29 -0.32
36 AT3G12180 Cornichon family protein 0.73 0.31 -0.31
37 AT1G47290 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 3beta-hydroxysteroid-dehydrogenase
/decarboxylase isoform 1,
3beta-hydroxysteroid-dehydrogenase
/decarboxylase isoform 1		 0.72 0.31 -0.31
38 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.71 0.32 -0.31
39 AT5G35560 DENN (AEX-3) domain-containing protein -0.71 0.31 -0.34
40 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.7 0.33 -0.31
41 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.7 0.31 -0.3
42 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.7 0.31 -0.3
43 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.69 0.31 -0.33
44 AT4G32770 tocopherol cyclase, chloroplast / vitamin E deficient 1
(VTE1) / sucrose export defective 1 (SXD1)		 SUCROSE EXPORT DEFECTIVE 1,
VITAMIN E DEFICIENT 1		 -0.69 0.35 -0.33
45 AT3G01320 SIN3-like 1 SIN3-like 1 -0.68 0.31 -0.31
46 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.67 0.31 -0.32
47 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 -0.67 0.31 -0.31
48 AT2G03140 alpha/beta-Hydrolases superfamily protein -0.66 0.34 -0.32
49 AT5G40340 Tudor/PWWP/MBT superfamily protein -0.66 0.3 -0.31
50 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.66 0.32 -0.3
51 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.65 0.31 -0.3
52 AT4G20880 ethylene-responsive nuclear protein / ethylene-regulated
nuclear protein (ERT2)		 -0.64 0.32 -0.31
53 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 -0.63 0.3 -0.33
54 AT1G59640 BIG PETAL P BIG PETAL, BIG PETAL P, BIG PETAL
UB, ZCW32		 -0.63 0.31 -0.31
55 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.62 0.32 -0.32
56 AT1G02390 glycerol-3-phosphate acyltransferase 2 ARABIDOPSIS THALIANA
GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 2,
glycerol-3-phosphate
acyltransferase 2		 -0.62 0.31 -0.31
57 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 -0.62 0.32 -0.3
58 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE -0.62 0.32 -0.32
59 AT5G02030 POX (plant homeobox) family protein BEL1-LIKE HOMEODOMAIN 9,
BELLRINGER, HB-6, LARSON,
PENNYWISE, REPLUMLESS, VAAMANA		 -0.61 0.31 -0.35
60 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 -0.61 0.31 -0.29
61 AT4G34040 RING/U-box superfamily protein -0.61 0.34 -0.32
62 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.6 0.3 -0.32
63 AT3G50410 OBF binding protein 1 OBF binding protein 1 -0.6 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
64 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.88 0.45 -0.42 C0123
65 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.8 0.43 -0.47
66 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.72 0.43 -0.42 C0210
67 C0254 Threonine D,L-Threonine L-Threonine isoleucine biosynthesis I (from threonine),
glycine biosynthesis,
threonine biosynthesis from homoserine,
tRNA charging 		-0.69 0.31 -0.31 C0254