AT3G61440 : BETA-SUBSTITUTED ALA SYNTHASE 3;1
Query Information
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AGICode AT3G61440
Description cysteine synthase C1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G61440 cysteine synthase C1 BETA-SUBSTITUTED ALA SYNTHASE 3;1,
CYSTEINE SYNTHASE C1, cysteine
synthase C1		 1 0.31 -0.31
2 AT1G50170 sirohydrochlorin ferrochelatase B sirohydrochlorin ferrochelatase B,
sirohydrochlorin ferrochelatase B		 0.79 0.29 -0.32
3 AT4G34050 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 caffeoyl coenzyme A
O-methyltransferase 1		 0.77 0.34 -0.32
4 AT3G55440 triosephosphate isomerase CYTOSOLIC TRIOSE PHOSPHATE
ISOMERASE, CYTOSOLIC ISOFORM
TRIOSE PHOSPHATE ISOMERASE,
triosephosphate isomerase		 0.77 0.3 -0.32
5 AT1G26160 Metal-dependent phosphohydrolase 0.74 0.32 -0.33
6 AT1G04410 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 1		 0.74 0.31 -0.3
7 AT3G52340 sucrose-6F-phosphate phosphohydrolase 2 SUCROSE-PHOSPHATASE 2,
sucrose-6F-phosphate
phosphohydrolase 2		 0.73 0.34 -0.34
8 AT1G70230 TRICHOME BIREFRINGENCE-LIKE 27 ALTERED XYLOGLUCAN 4, TRICHOME
BIREFRINGENCE-LIKE 27		 0.73 0.33 -0.3
9 AT3G51600 lipid transfer protein 5 lipid transfer protein 5 0.73 0.32 -0.33
10 AT2G31670 Stress responsive alpha-beta barrel domain protein 0.73 0.31 -0.31
11 AT3G01390 vacuolar membrane ATPase 10 AVMA10, vacuolar membrane ATPase
10		 0.73 0.32 -0.31
12 AT4G26500 chloroplast sulfur E ARABIDOPSIS THALIANA SULFUR E,
chloroplast sulfur E, MBRYO
DEFECTIVE 1374, SULFUR E 1		 0.73 0.33 -0.32
13 AT2G44570 glycosyl hydrolase 9B12 glycosyl hydrolase 9B12, glycosyl
hydrolase 9B12		 0.72 0.33 -0.33
14 AT5G47570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.72 0.29 -0.32
15 AT1G52150 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-15, ATHB15, CORONA, INCURVATA
4		 -0.72 0.31 -0.3
16 AT2G20690 lumazine-binding family protein 0.72 0.33 -0.31
17 AT4G32880 homeobox gene 8 homeobox gene 8, ATHB8, homeobox
gene 8		 -0.72 0.32 -0.32
18 AT4G20150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, mitochondrial respiratory
chain complex I, respiratory chain complex I; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.71 0.31 -0.32
19 AT1G02475 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.71 0.3 -0.28
20 AT1G55190 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F2, PRA7 0.7 0.31 -0.33
21 AT2G25190 PPPDE putative thiol peptidase family protein 0.7 0.33 -0.33
22 AT1G74780 Nodulin-like / Major Facilitator Superfamily protein 0.7 0.33 -0.31
23 AT3G48990 AMP-dependent synthetase and ligase family protein 0.69 0.31 -0.29
24 AT2G16600 rotamase CYP 3 rotamase CYP 3 0.69 0.31 -0.32
25 AT3G16770 ethylene-responsive element binding protein ethylene-responsive element
binding protein,
ethylene-responsive element
binding protein, ETHYLENE RESPONSE
FACTOR 72, RELATED TO AP2 3		 0.69 0.3 -0.32
26 AT5G10870 chorismate mutase 2 chorismate mutase 2, chorismate
mutase 2		 0.68 0.3 -0.31
27 AT5G01890 Leucine-rich receptor-like protein kinase family protein -0.68 0.31 -0.33
28 AT5G12170 CRT (chloroquine-resistance transporter)-like transporter 3 CRT (chloroquine-resistance
transporter)-like transporter 3		 0.68 0.3 -0.3
29 AT4G00895 ATPase, F1 complex, OSCP/delta subunit protein 0.68 0.34 -0.34
30 AT3G28920 homeobox protein 34 homeobox protein 34, homeobox
protein 34, ZINC FINGER
HOMEODOMAIN 9		 0.68 0.33 -0.32
31 AT1G30910 Molybdenum cofactor sulfurase family protein 0.67 0.31 -0.33
32 AT5G03730 Protein kinase superfamily protein AtCTR1, CONSTITUTIVE TRIPLE
RESPONSE 1, SUGAR-INSENSITIVE 1		 0.67 0.31 -0.33
33 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 0.67 0.32 -0.31
34 AT4G17890 ARF-GAP domain 8 ARF-GAP domain 8 0.67 0.32 -0.32
35 AT4G22150 plant UBX domain-containing protein 3 plant UBX domain-containing
protein 3		 0.67 0.33 -0.3
36 AT2G43350 glutathione peroxidase 3 glutathione peroxidase 3,
glutathione peroxidase 3		 0.67 0.31 -0.34
37 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.32 -0.31
38 AT1G31812 acyl-CoA-binding protein 6 ACYL-COA-BINDING PROTEIN,
acyl-CoA-binding protein 6		 0.66 0.35 -0.29
39 AT5G54540 Uncharacterised conserved protein (UCP012943) 0.66 0.34 -0.3
40 AT5G53160 regulatory components of ABA receptor 3 PYR1-like 8, regulatory components
of ABA receptor 3		 0.66 0.31 -0.31
41 AT1G49660 carboxyesterase 5 carboxyesterase 5, carboxyesterase
5		 0.66 0.33 -0.31
42 AT3G03980 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.33 -0.32
43 AT2G41230 unknown protein; Has 75 Blast hits to 75 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ORGAN SIZE RELATED 1 0.65 0.32 -0.31
44 AT1G80600 HOPW1-1-interacting 1 HOPW1-1-interacting 1 0.65 0.31 -0.32
45 AT5G46910 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 -0.65 0.33 -0.3
46 AT1G28130 Auxin-responsive GH3 family protein GH3.17 -0.65 0.33 -0.3
47 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.65 0.31 -0.32
48 AT1G64590 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.33 -0.31
49 AT3G13175 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.32 -0.31
50 AT4G36810 geranylgeranyl pyrophosphate synthase 1 geranylgeranyl pyrophosphate
synthase 1		 0.64 0.31 -0.31
51 AT3G11430 glycerol-3-phosphate acyltransferase 5 GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 5,
glycerol-3-phosphate
acyltransferase 5		 -0.64 0.33 -0.36
52 AT3G56840 FAD-dependent oxidoreductase family protein 0.64 0.31 -0.31
53 AT2G22360 DNAJ heat shock family protein 0.64 0.29 -0.31
54 AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein 0.64 0.32 -0.32
55 AT5G04260 WCRKC thioredoxin 2 WCRKC thioredoxin 2 0.64 0.3 -0.32
56 AT1G07390 receptor like protein 1 receptor like protein 1, receptor
like protein 1		 0.64 0.31 -0.29
57 AT3G14410 Nucleotide/sugar transporter family protein 0.63 0.3 -0.29
58 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.33 -0.32
59 AT3G25110 fatA acyl-ACP thioesterase fatA acyl-ACP thioesterase, fatA
acyl-ACP thioesterase		 -0.63 0.34 -0.3
60 AT5G51590 AT hook motif DNA-binding family protein -0.63 0.31 -0.32
61 AT1G78270 UDP-glucosyl transferase 85A4 UDP-glucosyl transferase 85A4,
UDP-glucosyl transferase 85A4		 0.63 0.3 -0.32
62 AT5G48840 homolog of bacterial PANC ARABIDOPSIS THALIANA PANTOTHENATE
SYNTHETASE, homolog of bacterial
PANC, PANTOTHENATE SYNTHETASE		 0.63 0.31 -0.33
63 AT2G36460 Aldolase superfamily protein 0.63 0.31 -0.32
64 AT5G13580 ABC-2 type transporter family protein ATP-binding cassette G6 -0.63 0.3 -0.32
65 AT3G48740 Nodulin MtN3 family protein AtSWEET11, SWEET11 0.63 0.3 -0.33
66 AT3G60480 unknown protein; Has 17 Blast hits to 17 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.32 -0.31
67 AT2G03200 Eukaryotic aspartyl protease family protein -0.63 0.32 -0.3
68 AT1G13460 Protein phosphatase 2A regulatory B subunit family protein 0.62 0.31 -0.32
69 AT5G57100 Nucleotide/sugar transporter family protein -0.62 0.32 -0.32
70 AT5G63910 farnesylcysteine lyase farnesylcysteine lyase 0.62 0.32 -0.3
71 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D		 -0.62 0.32 -0.31
72 AT2G24330 Protein of unknown function (DUF2296) 0.62 0.31 -0.33
73 AT2G18500 ovate family protein 7 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 7, ovate family protein 7		 -0.62 0.34 -0.31
74 AT3G25710 basic helix-loop-helix 32 ATAIG1, basic helix-loop-helix 32,
TARGET OF MONOPTEROS 5		 -0.62 0.3 -0.31
75 AT2G35900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 32 Blast hits to 32 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.62 0.32 -0.32
76 AT3G10330 Cyclin-like family protein 0.62 0.32 -0.32
77 AT1G76940 RNA-binding (RRM/RBD/RNP motifs) family protein 0.61 0.31 -0.34
78 AT5G07830 glucuronidase 2 glucuronidase 2, glucuronidase 2 0.61 0.29 -0.32
79 AT2G23610 methyl esterase 3 ARABIDOPSIS THALIANA METHYL
ESTERASE 3, methyl esterase 3		 0.61 0.3 -0.32
80 AT2G39980 HXXXD-type acyl-transferase family protein 0.61 0.31 -0.33
81 AT1G05020 ENTH/ANTH/VHS superfamily protein 0.61 0.31 -0.33
82 AT3G18080 B-S glucosidase 44 B-S glucosidase 44 0.61 0.3 -0.32
83 AT4G02700 sulfate transporter 3;2 sulfate transporter 3;2 0.61 0.32 -0.31
84 AT3G53510 ABC-2 type transporter family protein ATP-binding cassette G20 -0.61 0.3 -0.31
85 AT2G01210 Leucine-rich repeat protein kinase family protein -0.61 0.33 -0.34
86 AT1G56200 embryo defective 1303 embryo defective 1303 0.61 0.3 -0.29
87 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 -0.61 0.33 -0.32
88 AT1G09530 phytochrome interacting factor 3 PHYTOCHROME-ASSOCIATED PROTEIN 3,
phytochrome interacting factor 3,
PHOTOCURRENT 1		 0.61 0.31 -0.31
89 AT3G07550 RNI-like superfamily protein 0.61 0.29 -0.31
90 AT1G62410 MIF4G domain-containing protein 0.61 0.33 -0.32
91 AT5G65250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.61 0.32 -0.31
92 AT5G66080 Protein phosphatase 2C family protein -0.59 0.31 -0.32
93 AT2G01950 BRI1-like 2 BRI1-like 2, VASCULAR HIGHWAY 1 -0.59 0.31 -0.33
94 AT1G73590 Auxin efflux carrier family protein ARABIDOPSIS THALIANA PIN-FORMED 1,
PIN-FORMED 1		 -0.59 0.31 -0.32
95 AT5G23430 Transducin/WD40 repeat-like superfamily protein -0.59 0.31 -0.32
96 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATRX, CHR20 -0.59 0.33 -0.31
97 AT3G05670 RING/U-box protein -0.59 0.31 -0.3
98 AT5G64310 arabinogalactan protein 1 arabinogalactan protein 1, ATAGP1 -0.59 0.3 -0.32
99 AT2G35770 serine carboxypeptidase-like 28 serine carboxypeptidase-like 28 -0.58 0.31 -0.32
100 AT5G09520 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 2 -0.58 0.3 -0.33
101 AT1G73950 Transmembrane Fragile-X-F-associated protein -0.58 0.33 -0.3
102 AT4G12910 serine carboxypeptidase-like 20 serine carboxypeptidase-like 20 -0.58 0.34 -0.29
103 AT5G13900 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.57 0.31 -0.32
104 AT4G19130 Replication factor-A protein 1-related -0.57 0.31 -0.31
105 AT1G73410 myb domain protein 54 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 54, myb domain protein 54		 -0.56 0.32 -0.32
106 AT1G71870 MATE efflux family protein -0.55 0.31 -0.32
107 AT4G23496 SPIRAL1-like5 SPIRAL1-like5 -0.55 0.3 -0.32
108 AT5G20930 Protein kinase superfamily protein TOUSLED -0.55 0.32 -0.32
109 AT5G44550 Uncharacterised protein family (UPF0497) -0.55 0.31 -0.32
110 AT5G24510 60S acidic ribosomal protein family -0.54 0.31 -0.35
111 AT3G24110 Calcium-binding EF-hand family protein -0.54 0.33 -0.3
112 AT4G37730 basic leucine-zipper 7 basic leucine-zipper 7, basic
leucine-zipper 7		 -0.54 0.3 -0.31
113 AT3G27350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40700.1); Has 230 Blast
hits to 202 proteins in 35 species: Archae - 0; Bacteria -
3; Metazoa - 77; Fungi - 4; Plants - 130; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 -0.54 0.32 -0.31
114 AT4G00820 IQ-domain 17 IQ-domain 17 -0.54 0.31 -0.32
115 AT4G20230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.53 0.33 -0.33
116 AT4G36610 alpha/beta-Hydrolases superfamily protein -0.52 0.28 -0.32
117 AT5G13300 ARF GTPase-activating protein ARF-GAP DOMAIN3, SCARFACE, ASCULAR
NETWORK DEFECTIVE 3		 -0.52 0.33 -0.32
118 AT4G11920 cell cycle switch protein 52 A2 cell cycle switch protein 52 A2,
FIZZY-RELATED 1		 -0.52 0.3 -0.32
119 AT5G25475 AP2/B3-like transcriptional factor family protein -0.52 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
120 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis -0.65 0.46 -0.46 C0240
121 C0212 PR_MST_2336.8 - - - -0.62 0.43 -0.48
122 C0100 Glucose-6-phosphate D-(+)-Glucose-6-phosphate D-Glucose-6-phosphate starch biosyntehsis -0.58 0.32 -0.33 C0100
123 C0235 Sinapoyl malate Sinapoyl-(S)-malate Sinapoyl-(S)-malate sinapate ester biosynthesis -0.57 0.29 -0.3 C0235