AT3G61390 : -
Query Information
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AGICode AT3G61390
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G61390 RING/U-box superfamily protein 1 0.34 -0.33
2 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.72 0.31 -0.31
3 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.7 0.31 -0.33
4 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 0.7 0.32 -0.31
5 AT1G06630 F-box/RNI-like superfamily protein -0.69 0.3 -0.32
6 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 0.69 0.34 -0.32
7 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED 0.69 0.35 -0.33
8 AT5G55940 Uncharacterised protein family (UPF0172) embryo defective 2731 -0.68 0.3 -0.32
9 AT5G28590 DNA-binding family protein 0.67 0.31 -0.33
10 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 0.67 0.32 -0.31
11 AT1G09550 Pectinacetylesterase family protein 0.67 0.33 -0.33
12 AT1G13200 F-box and associated interaction domains-containing protein 0.66 0.3 -0.3
13 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 0.66 0.34 -0.3
14 AT2G15610 Protein of unknown function (DUF1685) 0.66 0.32 -0.34
15 AT5G41850 alpha/beta-Hydrolases superfamily protein 0.65 0.31 -0.31
16 AT1G12260 NAC 007 NAC 007, EMBRYO DEFECTIVE 2749,
NAC 007, VASCULAR RELATED
NAC-DOMAIN PROTEIN 4		 0.65 0.3 -0.31
17 AT3G48680 gamma carbonic anhydrase-like 2 AtCAL2, gamma carbonic
anhydrase-like 2		 -0.65 0.29 -0.31
18 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 0.65 0.31 -0.31
19 AT5G01730 SCAR family protein 4 ATSCAR4, SCAR family protein 4,
WAVE3		 0.64 0.34 -0.32
20 AT1G73720 transducin family protein / WD-40 repeat family protein SUPPRESSORS OF MEC-8 AND UNC-52 1 -0.64 0.3 -0.31
21 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.64 0.3 -0.31
22 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.31 -0.3
23 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.64 0.34 -0.3
24 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 -0.64 0.32 -0.31
25 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 0.64 0.29 -0.31
26 AT1G12910 Transducin/WD40 repeat-like superfamily protein ANTHOCYANIN11, LIGHT-REGULATED WD
1		 -0.64 0.29 -0.33
27 AT5G40520 unknown protein; Has 3679 Blast hits to 2474 proteins in
390 species: Archae - 10; Bacteria - 571; Metazoa - 1012;
Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes -
1270 (source: NCBI BLink).		 0.64 0.31 -0.31
28 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 0.63 0.32 -0.3
29 AT5G55960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0118
(InterPro:IPR002549); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.63 0.31 -0.32
30 AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.63 0.31 -0.33
31 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 -0.63 0.32 -0.33
32 AT5G37055 HIT-type Zinc finger family protein ATSWC6, SERRATED LEAVES AND EARLY
FLOWERING		 -0.63 0.31 -0.29
33 AT4G10180 light-mediated development protein 1 / deetiolated1 (DET1) ATDET1, DE-ETIOLATED 1, FUSCA 2 0.63 0.31 -0.33
34 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.29
35 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 0.63 0.32 -0.3
36 AT4G11950 Protein of unknown function (DUF1191) 0.63 0.33 -0.33
37 AT4G16280 RNA binding;abscisic acid binding FCA 0.62 0.3 -0.33
38 AT2G37120 S1FA-like DNA-binding protein -0.62 0.29 -0.3
39 AT4G30050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.3 -0.32
40 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.62 0.34 -0.32
41 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 0.62 0.34 -0.33
42 AT5G09630 LisH/CRA/RING-U-box domains-containing protein -0.62 0.3 -0.32
43 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A -0.62 0.31 -0.32
44 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 0.62 0.29 -0.3
45 AT4G10820 F-box family protein 0.62 0.33 -0.31
46 AT5G20170 RNA polymerase II transcription mediators 0.62 0.32 -0.3
47 AT5G38370 Protein of unknown function (DUF1644) 0.62 0.33 -0.33
48 AT4G10690 transposable element gene 0.62 0.32 -0.31
49 AT3G20040 Hexokinase ATHXK4, HEXOKINASE-LIKE 2 0.62 0.32 -0.33
50 AT2G43150 Proline-rich extensin-like family protein 0.62 0.35 -0.3
51 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 0.62 0.31 -0.31
52 AT1G40230 transposable element gene 0.62 0.32 -0.31
53 AT1G07170 PHF5-like protein -0.61 0.3 -0.32
54 AT4G31610 Transcriptional factor B3 family protein REPRODUCTIVE MERISTEM 1,
REPRODUCTIVE MERISTEM 1		 0.61 0.32 -0.32
55 AT5G46300 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.61 0.3 -0.3
56 AT2G19630 F-box and associated interaction domains-containing protein 0.61 0.33 -0.32
57 AT5G61190 putative endonuclease or glycosyl hydrolase with C2H2-type
zinc finger domain		 0.61 0.31 -0.3
58 AT5G43830 Aluminium induced protein with YGL and LRDR motifs -0.61 0.33 -0.32
59 AT1G35330 RING/U-box superfamily protein -0.61 0.32 -0.33
60 AT3G12090 tetraspanin6 tetraspanin6 -0.61 0.33 -0.32
61 AT5G09770 Ribosomal protein L17 family protein -0.61 0.34 -0.3
62 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.61 0.32 -0.31
63 AT3G43760 transposable element gene 0.61 0.29 -0.31
64 AT3G42460 transposable element gene 0.6 0.28 -0.34
65 AT4G39010 glycosyl hydrolase 9B18 glycosyl hydrolase 9B18, glycosyl
hydrolase 9B18		 0.6 0.31 -0.3
66 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.6 0.3 -0.3
67 AT1G30010 Intron maturase, type II family protein 0.6 0.3 -0.33
68 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.6 0.31 -0.33
69 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.6 0.31 -0.3
70 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 0.59 0.3 -0.31
71 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.59 0.31 -0.31
72 AT5G63620 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.59 0.3 -0.33
73 AT3G04220 Disease resistance protein (TIR-NBS-LRR class) family 0.59 0.3 -0.3
74 AT3G47610 transcription regulators;zinc ion binding -0.58 0.28 -0.33
75 AT2G06110 transposable element gene 0.58 0.32 -0.33
76 AT2G39520 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.32 -0.32
77 AT3G24480 Leucine-rich repeat (LRR) family protein 0.58 0.31 -0.35
78 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 0.58 0.31 -0.31
79 AT1G77730 Pleckstrin homology (PH) domain superfamily protein 0.58 0.31 -0.31
80 AT1G44414 unknown protein; Has 29 Blast hits to 29 proteins in 12
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.29 -0.3
81 AT2G24255 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF295 (InterPro:IPR005174); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF295) (TAIR:AT1G64840.1); Has 124 Blast hits to
121 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.32 -0.33
82 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein 0.57 0.34 -0.32
83 AT3G23980 BLISTER BLISTER, KOLD SENSITIV 1 0.57 0.33 -0.3
84 AT3G07420 asparaginyl-tRNA synthetase 2 ASPARAGINYL-TRNA SYNTHETASE 2,
asparaginyl-tRNA synthetase 2,
SYNTHETASE C2, ASPARAGINYL-TRNA
SYNTHETASE 2		 0.57 0.31 -0.32
85 AT1G06540 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G30930.1); Has 16 Blast hits
to 16 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.32
86 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 0.57 0.31 -0.34
87 AT5G61800 Pentatricopeptide repeat (PPR) superfamily protein 0.57 0.31 -0.31
88 AT3G13225 WW domain-containing protein 0.57 0.3 -0.32
89 AT3G50210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.57 0.31 -0.3
90 AT5G05950 maternal effect embryo arrest 60 maternal effect embryo arrest 60 -0.55 0.31 -0.32
91 AT3G60020 SKP1-like 5 SKP1-like 5, SKP1-like 5 -0.54 0.31 -0.31
92 AT5G46115 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.54 0.3 -0.32
93 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.54 0.32 -0.31
94 AT5G16110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast
hits to 133 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.32 -0.32
95 AT3G22680 RNA-DIRECTED DNA METHYLATION 1 RNA-DIRECTED DNA METHYLATION 1 -0.53 0.33 -0.34
96 AT2G42660 Homeodomain-like superfamily protein -0.53 0.3 -0.31
97 AT2G17880 Chaperone DnaJ-domain superfamily protein -0.53 0.31 -0.3
98 AT1G79660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.52 0.32 -0.32
99 AT3G16980 RNA polymerases M/15 Kd subunit NRPB9A, NRPD9A, NRPE9A -0.52 0.3 -0.31
100 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 -0.52 0.29 -0.32