AT3G60860 : -
Query Information
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AGICode AT3G60860
Description SEC7-like guanine nucleotide exchange family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G60860 SEC7-like guanine nucleotide exchange family protein 1 0.32 -0.32
2 AT1G49780 plant U-box 26 plant U-box 26 -0.8 0.3 -0.3
3 AT4G32060 calcium-binding EF hand family protein -0.75 0.31 -0.31
4 AT4G38200 SEC7-like guanine nucleotide exchange family protein 0.73 0.33 -0.28
5 AT2G24790 CONSTANS-like 3 ATCOL3, CONSTANS-like 3 -0.71 0.31 -0.34
6 AT2G05270 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.32 -0.3
7 AT1G73540 nudix hydrolase homolog 21 nudix hydrolase homolog 21, nudix
hydrolase homolog 21		 -0.67 0.32 -0.33
8 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 -0.67 0.34 -0.3
9 AT4G10000 Thioredoxin family protein -0.66 0.32 -0.31
10 AT5G65950 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1683, C-terminal
(InterPro:IPR012880), Foie gras liver health family 1
(InterPro:IPR021773); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.66 0.33 -0.29
11 AT5G11560 catalytics 0.66 0.32 -0.3
12 AT5G10310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.31 -0.32
13 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 0.66 0.32 -0.32
14 AT1G14390 Leucine-rich repeat protein kinase family protein 0.66 0.31 -0.33
15 AT2G02410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF901 (InterPro:IPR010298); Has 1151
Blast hits to 1151 proteins in 597 species: Archae - 0;
Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).		 -0.65 0.31 -0.34
16 AT2G41451 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G57200.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.33 -0.3
17 AT2G45820 Remorin family protein -0.64 0.3 -0.32
18 AT1G75770 unknown protein; Has 6 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.31 -0.31
19 AT1G78920 vacuolar H+-pyrophosphatase 2 AtVHP2;1, vacuolar
H+-pyrophosphatase 2,
VACUOLAR-PYROPHOSPHATASE LIKE
PROTEIN 1, VHP2;1, vacuolar
H+-pyrophosphatase 2		 0.63 0.33 -0.31
20 AT5G11040 TRS120 AtTRS120, TRS120 0.63 0.29 -0.32
21 AT3G01130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.63 0.31 -0.34
22 AT2G28520 vacuolar proton ATPase A1 vacuolar proton ATPase A1 0.63 0.32 -0.32
23 AT5G53940 Yippee family putative zinc-binding protein -0.63 0.3 -0.31
24 AT3G22050 Domain of unknown function (DUF26) 0.63 0.33 -0.33
25 AT3G28720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in
85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi
- 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732
(source: NCBI BLink).		 0.63 0.31 -0.33
26 AT4G01950 glycerol-3-phosphate acyltransferase 3 ATGPAT3, glycerol-3-phosphate
acyltransferase 3		 -0.63 0.31 -0.31
27 AT1G01570 Protein of unknown function (DUF604) -0.63 0.33 -0.33
28 AT1G32150 basic region/leucine zipper transcription factor 68 AtbZIP68, basic region/leucine
zipper transcription factor 68		 -0.62 0.29 -0.32
29 AT4G25470 C-repeat/DRE binding factor 2 ATCBF2, C-repeat/DRE binding
factor 2, DRE/CRT-BINDING PROTEIN
1C, FREEZING TOLERANCE QTL 4		 -0.62 0.31 -0.34
30 AT1G67340 HCP-like superfamily protein with MYND-type zinc finger -0.62 0.31 -0.31
31 AT1G27100 Actin cross-linking protein -0.62 0.31 -0.32
32 AT4G10280 RmlC-like cupins superfamily protein -0.62 0.3 -0.32
33 AT3G59030 MATE efflux family protein A. THALIANA TRANSPARENT TESTA,
TRANSPARENT TESTA 12		 0.62 0.31 -0.29
34 AT1G59560 E3 Ubiquitin ligase family protein DIAP1-like protein 2, ZCF61 -0.62 0.32 -0.3
35 AT3G13640 RNAse l inhibitor protein 1 ATP-binding cassette E1, RNAse l
inhibitor protein 1, RNAse l
inhibitor protein 1		 -0.61 0.33 -0.3
36 AT2G07360 SH3 domain-containing protein 0.61 0.33 -0.32
37 AT5G34880 transposable element gene 0.61 0.31 -0.3
38 AT2G03390 uvrB/uvrC motif-containing protein -0.61 0.31 -0.33
39 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.61 0.31 -0.31
40 AT3G10650 BEST Arabidopsis thaliana protein match is:
nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast
hits to 31782 proteins in 2093 species: Archae - 202;
Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants -
1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI
BLink).		 AtNUP1, NUP1 0.61 0.29 -0.33
41 AT1G12610 Integrase-type DNA-binding superfamily protein DWARF AND DELAYED FLOWERING 1 -0.61 0.34 -0.3
42 AT5G49050 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to stress; LOCATED IN: cellular_component unknown;
CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016),
Rossmann-like alpha/beta/alpha sandwich fold
(InterPro:IPR014729); BEST Arabidopsis thaliana protein
match is: Adenine nucleotide alpha hydrolases-like
superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.31 -0.32
43 AT4G10925 Nuclear transport factor 2 (NTF2) family protein -0.61 0.32 -0.33
44 AT2G46400 WRKY DNA-binding protein 46 WRKY DNA-BINDING PROTEIN 46, WRKY
DNA-binding protein 46		 -0.6 0.3 -0.32
45 AT1G35210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF740 (InterPro:IPR008004);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.3 -0.34
46 AT2G26970 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.6 0.33 -0.31
47 AT2G33620 AT hook motif DNA-binding family protein -0.6 0.34 -0.31
48 AT4G04470 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein PMP22 -0.6 0.33 -0.32
49 AT4G27280 Calcium-binding EF-hand family protein -0.6 0.33 -0.32
50 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.6 0.32 -0.33
51 AT2G26190 calmodulin-binding family protein -0.59 0.32 -0.31
52 AT5G03970 F-box associated ubiquitination effector family protein -0.59 0.31 -0.32
53 AT3G18930 RING/U-box superfamily protein -0.59 0.33 -0.3
54 AT4G27657 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G54145.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.59 0.34 -0.3
55 AT1G77130 plant glycogenin-like starch initiation protein 2 glucuronic acid substitution of
xylan 3, plant glycogenin-like
starch initiation protein 2		 0.59 0.32 -0.34
56 AT5G60570 Galactose oxidase/kelch repeat superfamily protein 0.59 0.33 -0.3
57 AT5G11070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.59 0.35 -0.31
58 AT3G44080 F-box family protein -0.58 0.32 -0.33
59 AT4G29090 Ribonuclease H-like superfamily protein 0.58 0.31 -0.32
60 AT3G56830 Protein of unknown function (DUF565) -0.57 0.31 -0.32
61 AT3G52640 Zn-dependent exopeptidases superfamily protein 0.57 0.32 -0.29
62 AT3G50060 myb domain protein 77 myb domain protein 77 -0.57 0.31 -0.33
63 AT3G27785 myb domain protein 118 ATMYB118, myb domain protein 118,
PLANT GROWTH ACTIVATOR 37		 -0.57 0.31 -0.31
64 AT3G29190 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.57 0.31 -0.31
65 AT3G62180 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.57 0.33 -0.3
66 AT1G22010 unknown protein; Has 12 Blast hits to 12 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.32 -0.34
67 AT3G50660 Cytochrome P450 superfamily protein CLOMAZONE-RESISTANT, CYTOCHROME
P450 90B1, DWARF 4, PARTIALLY
SUPPRESSING COI1 INSENSITIVITY TO
JA 1, SHADE AVOIDANCE 1,
SUPPRESSOR OF NPH4 2		 -0.56 0.32 -0.31
68 AT4G24980 nodulin MtN21 /EamA-like transporter family protein 0.56 0.31 -0.33
69 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 -0.56 0.29 -0.33
70 AT3G09870 SAUR-like auxin-responsive protein family -0.56 0.32 -0.32
71 AT1G18690 Galactosyl transferase GMA12/MNN10 family protein 0.56 0.32 -0.32
72 AT3G28620 Zinc finger, C3HC4 type (RING finger) family protein -0.56 0.33 -0.31
73 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31		 -0.56 0.31 -0.34
74 AT1G10520 DNA polymerase lambda (POLL) AtPol{lambda}, DNA polymerase
{lambda}		 -0.56 0.31 -0.34
75 AT2G35330 RING/U-box superfamily protein 0.56 0.3 -0.29
76 AT1G49980 DNA/RNA polymerases superfamily protein -0.56 0.33 -0.32
77 AT2G15720 transposable element gene 0.56 0.32 -0.32
78 AT5G47830 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.56 0.33 -0.3
79 AT1G23690 Domain of unknown function DUF220 -0.56 0.34 -0.33
80 AT5G55550 RNA-binding (RRM/RBD/RNP motifs) family protein 0.55 0.32 -0.31
81 AT5G41770 crooked neck protein, putative / cell cycle protein,
putative		 0.55 0.33 -0.33
82 AT5G35450 Disease resistance protein (CC-NBS-LRR class) family 0.55 0.32 -0.31
83 AT5G16650 Chaperone DnaJ-domain superfamily protein -0.55 0.33 -0.32
84 AT5G03555 permease, cytosine/purines, uracil, thiamine, allantoin
family protein		 0.55 0.33 -0.3
85 AT5G63480 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.55 0.3 -0.3
86 AT5G22600 FBD / Leucine Rich Repeat domains containing protein -0.55 0.3 -0.31
87 AT4G01930 Cysteine/Histidine-rich C1 domain family protein 0.55 0.3 -0.31
88 AT2G39260 binding;RNA binding 0.55 0.32 -0.3
89 AT1G22190 Integrase-type DNA-binding superfamily protein related to AP2 4 -0.55 0.3 -0.3
90 AT4G39320 microtubule-associated protein-related -0.55 0.3 -0.3
91 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 -0.55 0.31 -0.31
92 AT3G24360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.55 0.29 -0.32
93 AT4G21200 gibberellin 2-oxidase 8 ARABIDOPSIS THALIANA GIBBERELLIN
2-OXIDASE 8, gibberellin 2-oxidase
8		 0.55 0.33 -0.32
94 AT3G42250 transposable element gene -0.55 0.3 -0.31
95 AT5G46710 PLATZ transcription factor family protein -0.55 0.32 -0.33
96 AT4G01920 Cysteine/Histidine-rich C1 domain family protein 0.55 0.31 -0.31
97 AT1G18740 Protein of unknown function (DUF793) -0.55 0.33 -0.33
98 AT3G03570 Protein of unknown function (DUF3550/UPF0682) 0.54 0.31 -0.31
99 AT2G36910 ATP binding cassette subfamily B1 ATP-binding cassette B1,
ARABIDOPSIS THALIANA P
GLYCOPROTEIN1, P-GLYCOPROTEIN 1		 0.54 0.31 -0.33
100 AT1G60980 gibberellin 20-oxidase 4 gibberellin 20-oxidase 4,
gibberellin 20-oxidase 4		 0.54 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
101 C0176 MST_2406.9 - - - -0.71 0.44 -0.48
102 C0169 MST_2105.7 - - - -0.7 0.46 -0.45
103 C0172 MST_2214.3 - - - -0.7 0.46 -0.47
104 C0153 Monogalactosyldiacylgycerol-34:6 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.69 0.47 -0.47 C0153
105 C0079 Digalactosyldiacylglycerol-34:5 - Digalactosyldiacylglycerol-34:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.65 0.44 -0.44 C0079