AT3G60260 : -
Query Information
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AGICode AT3G60260
Description ELMO/CED-12 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G60260 ELMO/CED-12 family protein 1 0.32 -0.32
2 AT2G15270 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1168 (InterPro:IPR009548); Has 1930
Blast hits to 1364 proteins in 219 species: Archae - 0;
Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96;
Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).		 0.78 0.33 -0.32
3 AT4G04420 transposable element gene -0.78 0.32 -0.29
4 AT2G30400 ovate family protein 2 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 2, ovate family protein 2		 0.77 0.31 -0.33
5 AT4G13790 SAUR-like auxin-responsive protein family 0.76 0.33 -0.3
6 AT2G06230 transposable element gene -0.76 0.31 -0.32
7 AT2G23200 Protein kinase superfamily protein -0.76 0.29 -0.31
8 AT1G02400 gibberellin 2-oxidase 6 Arabidopsis thaliana gibberellin
2-oxidase 4, ARABIDOPSIS THALIANA
GIBBERELLIN 2-OXIDASE 6,
DOWNSTREAM TARGET OF AGL15 1,
gibberellin 2-oxidase 6		 0.74 0.31 -0.32
9 AT1G31230 aspartate kinase-homoserine dehydrogenase i ASPARTATE KINASE-HOMOSERINE
DEHYDROGENASE, aspartate
kinase-homoserine dehydrogenase i		 -0.74 0.32 -0.28
10 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 0.74 0.32 -0.32
11 AT5G02410 DIE2/ALG10 family homolog of yeast ALG10 -0.74 0.32 -0.3
12 AT2G45150 cytidinediphosphate diacylglycerol synthase 4 cytidinediphosphate diacylglycerol
synthase 4		 -0.74 0.33 -0.31
13 AT4G10550 Subtilase family protein -0.74 0.32 -0.32
14 AT1G15290 Tetratricopeptide repeat (TPR)-like superfamily protein -0.74 0.32 -0.32
15 AT1G71810 Protein kinase superfamily protein -0.74 0.31 -0.32
16 AT5G39560 Galactose oxidase/kelch repeat superfamily protein -0.73 0.29 -0.31
17 AT1G11070 BEST Arabidopsis thaliana protein match is:
Hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in
152 species: Archae - 0; Bacteria - 68; Metazoa - 159;
Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes -
67 (source: NCBI BLink).		 -0.73 0.31 -0.31
18 AT1G16780 Inorganic H pyrophosphatase family protein AtVHP2;2, VHP2;2 -0.73 0.33 -0.31
19 AT5G35420 transposable element gene -0.72 0.33 -0.32
20 AT1G13080 cytochrome P450, family 71, subfamily B, polypeptide 2 cytochrome P450, family 71,
subfamily B, polypeptide 2		 -0.72 0.35 -0.32
21 AT1G05950 unknown protein; Has 50 Blast hits to 45 proteins in 14
species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.72 0.32 -0.3
22 AT2G46420 Plant protein 1589 of unknown function -0.72 0.31 -0.31
23 AT5G61420 myb domain protein 28 AtMYB28, HIGH ALIPHATIC
GLUCOSINOLATE 1, myb domain
protein 28, PRODUCTION OF
METHIONINE-DERIVED GLUCOSINOLATE 1		 -0.72 0.33 -0.32
24 AT4G21450 PapD-like superfamily protein 0.72 0.32 -0.31
25 AT5G01270 carboxyl-terminal domain (ctd) phosphatase-like 2 ATCPL2, carboxyl-terminal domain
(ctd) phosphatase-like 2		 -0.72 0.3 -0.3
26 AT5G57620 myb domain protein 36 myb domain protein 36, myb domain
protein 36		 0.72 0.32 -0.31
27 AT2G11090 transposable element gene -0.72 0.31 -0.31
28 AT3G07400 lipase class 3 family protein -0.71 0.32 -0.33
29 AT4G13450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.71 0.32 -0.3
30 AT2G05000 transposable element gene -0.71 0.31 -0.3
31 AT2G23660 LOB domain-containing protein 10 LOB domain-containing protein 10 -0.71 0.31 -0.33
32 AT5G40060 Disease resistance protein (NBS-LRR class) family -0.71 0.31 -0.32
33 AT3G28080 nodulin MtN21 /EamA-like transporter family protein -0.71 0.31 -0.32
34 AT4G02170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38700.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.32
35 AT1G22290 14-3-3 family protein -0.7 0.32 -0.34
36 AT1G77400 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana
protein match is: hydroxyproline-rich glycoprotein family
protein (TAIR:AT1G21695.1); Has 328 Blast hits to 314
proteins in 61 species: Archae - 0; Bacteria - 12; Metazoa
- 130; Fungi - 28; Plants - 92; Viruses - 10; Other
Eukaryotes - 56 (source: NCBI BLink).		 -0.7 0.32 -0.31
37 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 0.7 0.31 -0.3
38 AT2G05170 vacuolar protein sorting 11 vacuolar protein sorting 11,
vacuolar protein sorting 11		 -0.7 0.31 -0.34
39 AT4G13130 Cysteine/Histidine-rich C1 domain family protein 0.7 0.33 -0.28
40 AT4G39110 Malectin/receptor-like protein kinase family protein -0.7 0.3 -0.32
41 AT1G10980 Lung seven transmembrane receptor family protein -0.7 0.31 -0.31
42 AT4G14460 transposable element gene -0.7 0.32 -0.31
43 AT5G20420 chromatin remodeling 42 chromatin remodeling 42 -0.7 0.34 -0.3
44 AT4G38530 phospholipase C1 phospholipase C1, phospholipase C1 -0.7 0.31 -0.31
45 AT1G69440 Argonaute family protein ARGONAUTE7, ZIPPY -0.7 0.3 -0.3
46 AT3G24280 small acidic protein 2 small acidic protein 2 -0.7 0.32 -0.3
47 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.69 0.32 -0.32
48 AT1G49010 Duplicated homeodomain-like superfamily protein -0.69 0.31 -0.31
49 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 0.69 0.3 -0.31
50 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.69 0.31 -0.33
51 AT1G30550 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.69 0.3 -0.32
52 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 -0.69 0.31 -0.32
53 AT4G33450 myb domain protein 69 MYB DOMAIN PROTEIN 69, myb domain
protein 69		 -0.69 0.32 -0.31
54 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein 0.69 0.31 -0.29
55 AT1G71697 choline kinase 1 choline kinase 1, CHOLINE KINASE,
choline kinase 1		 0.69 0.32 -0.33
56 AT1G49370 pseudogene, similar to OSJNBa0072F16.8, blastp match of 42%
identity and 6.6e-73 P-value to
GP|21739229|emb|CAD40984.1||AL606460 OSJNBa0072F16.8 {Oryza
sativa (japonica cultivar-group)}		 -0.68 0.31 -0.3
57 AT2G46900 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix,
Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to
2464 proteins in 333 species: Archae - 2; Bacteria - 151;
Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47;
Other Eukaryotes - 1303 (source: NCBI BLink).		 0.68 0.33 -0.33
58 AT4G29230 NAC domain containing protein 75 NAC domain containing protein 75,
NAC domain containing protein 75		 0.68 0.32 -0.31
59 AT1G23180 ARM repeat superfamily protein -0.68 0.32 -0.32
60 AT5G10950 Tudor/PWWP/MBT superfamily protein 0.68 0.33 -0.29
61 AT4G04480 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
flower, pollen tube; EXPRESSED DURING: petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: F-box family protein with a
domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has
78 Blast hits to 78 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.33 -0.32
62 AT2G32360 Ubiquitin-like superfamily protein -0.68 0.31 -0.3
63 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.68 0.32 -0.31
64 AT3G55600 Membrane fusion protein Use1 0.68 0.33 -0.3
65 AT4G10820 F-box family protein -0.68 0.31 -0.33
66 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 -0.68 0.32 -0.31
67 AT2G34020 Calcium-binding EF-hand family protein 0.68 0.32 -0.32
68 AT3G20340 Expression of the gene is downregulated in the presence of
paraquat, an inducer of photoxidative stress.		 0.67 0.33 -0.33
69 AT4G12040 A20/AN1-like zinc finger family protein AtSAP7, stress-associated protein
7		 0.67 0.31 -0.31
70 AT2G20160 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 ARABIDOPSIS SKP1-LIKE 17, MEIDOS -0.67 0.32 -0.32
71 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 -0.67 0.29 -0.32
72 AT2G18750 Calmodulin-binding protein 0.67 0.31 -0.31
73 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.67 0.29 -0.31
74 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 -0.67 0.31 -0.31
75 AT3G43730 transposable element gene -0.67 0.3 -0.34
76 AT1G50340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.67 0.34 -0.31
77 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 -0.67 0.33 -0.32
78 AT2G41310 response regulator 3 RESPONSE REGULATOR 8, response
regulator 3, response regulator 3		 -0.66 0.3 -0.33
79 AT4G04980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast
hits to 15699 proteins in 1063 species: Archae - 116;
Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants -
3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI
BLink).		 -0.66 0.29 -0.33
80 AT1G07420 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol
4-alpha-methyl oxidase 1, sterol
4-alpha-methyl-oxidase 2-1		 0.66 0.34 -0.31
81 AT1G31530 DNAse I-like superfamily protein -0.66 0.33 -0.29
82 AT3G47430 peroxin 11B peroxin 11B -0.66 0.3 -0.32
83 AT1G77220 Protein of unknown function (DUF300) 0.66 0.33 -0.33
84 AT3G44740 Class II aaRS and biotin synthetases superfamily protein -0.66 0.31 -0.31
85 AT1G66730 DNA LIGASE 6 DNA LIGASE 6, DNA LIGASE 6 -0.66 0.33 -0.32
86 ATMG00820 Reverse transcriptase (RNA-dependent DNA polymerase) ORF170 -0.66 0.32 -0.31
87 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 -0.66 0.3 -0.33
88 AT3G46130 myb domain protein 48 myb domain protein 48, ATMYB48-1,
ATMYB48-2, ATMYB48-3, myb domain
protein 48		 -0.66 0.33 -0.31
89 AT5G43800 transposable element gene -0.66 0.32 -0.29
90 AT4G29580 Cytidine/deoxycytidylate deaminase family protein -0.66 0.32 -0.28
91 AT1G26300 BSD domain-containing protein 0.66 0.33 -0.33
92 AT2G15750 transposable element gene -0.66 0.31 -0.32
93 AT2G24320 alpha/beta-Hydrolases superfamily protein -0.66 0.28 -0.32
94 AT5G41850 alpha/beta-Hydrolases superfamily protein -0.65 0.31 -0.33
95 AT5G28620 protein kinase C-related 0.65 0.32 -0.32
96 AT2G35160 SU(VAR)3-9 homolog 5 SET DOMAIN-CONTAINING PROTEIN 9,
SU(VAR)3-9 homolog 5		 -0.65 0.32 -0.3
97 AT2G03730 ACT domain repeat 5 ACT domain repeat 5 0.65 0.34 -0.32
98 AT5G14240 Thioredoxin superfamily protein 0.65 0.32 -0.33
99 AT5G14530 Transducin/WD40 repeat-like superfamily protein 0.65 0.31 -0.32
100 AT5G62520 similar to RCD one 5 similar to RCD one 5 0.65 0.3 -0.33
101 AT2G17970 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.31 -0.32
102 AT5G20690 Leucine-rich repeat protein kinase family protein -0.65 0.32 -0.34
103 AT1G77120 alcohol dehydrogenase 1 ALCOHOL DEHYDROGENASE, alcohol
dehydrogenase 1, ARABIDOPSIS
THALIANA ALCOHOL DEHYDROGENASE,
ATADH1		 0.65 0.32 -0.31
104 AT2G05370 BEST Arabidopsis thaliana protein match is: RNA-dependent
RNA polymerase 6 (TAIR:AT3G49500.1); Has 65 Blast hits to
37 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.3 -0.3
105 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 -0.65 0.32 -0.33
106 AT3G56160 Sodium Bile acid symporter family -0.65 0.33 -0.3
107 AT3G45590 splicing endonuclease 1 splicing endonuclease 1, splicing
endonuclease 1		 0.65 0.31 -0.31
108 AT3G19390 Granulin repeat cysteine protease family protein 0.65 0.3 -0.3
109 AT2G10930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48500.1); Has 7 Blast hits to
7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.33 -0.31
110 AT2G40620 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.64 0.3 -0.31
111 AT5G27940 WPP domain protein 3 WPP domain protein 3 -0.64 0.31 -0.3
112 AT4G17710 homeodomain GLABROUS 4 homeodomain GLABROUS 4 -0.64 0.31 -0.31
113 AT3G49050 alpha/beta-Hydrolases superfamily protein -0.64 0.34 -0.32
114 AT2G16090 RING/U-box superfamily protein ARIADNE 2, ARABIDOPSIS ARIADNE 2 -0.64 0.32 -0.33
115 AT3G04200 RmlC-like cupins superfamily protein -0.64 0.3 -0.32
116 AT3G60250 casein kinase II beta chain 3 casein kinase II beta chain 3 0.64 0.31 -0.32
117 AT5G33280 Voltage-gated chloride channel family protein -0.64 0.31 -0.29
118 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.31 -0.31
119 AT3G10300 Calcium-binding EF-hand family protein 0.64 0.32 -0.31
120 AT2G19650 Cysteine/Histidine-rich C1 domain family protein -0.64 0.3 -0.31
121 AT4G02730 Transducin/WD40 repeat-like superfamily protein AtWDR5b, human WDR5 (WD40 repeat)
homolog b		 0.64 0.29 -0.32
122 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED -0.64 0.29 -0.3
123 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.31 -0.31
124 AT4G16745 Exostosin family protein -0.64 0.32 -0.33
125 AT1G23610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23640.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.64 0.3 -0.31
126 AT3G25900 Homocysteine S-methyltransferase family protein ATHMT-1, HMT-1 0.64 0.33 -0.3
127 AT3G29230 Tetratricopeptide repeat (TPR)-like superfamily protein -0.64 0.32 -0.33
128 AT2G13230 transposable element gene 0.64 0.32 -0.28
129 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 0.64 0.31 -0.31
130 AT4G20290 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.63 0.31 -0.31
131 AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40
(CYP40) / rotamase		 CYCLOPHILIN 40, SQUINT 0.63 0.32 -0.33
132 AT1G26820 ribonuclease 3 ribonuclease 3 0.63 0.3 -0.32
133 AT4G08710 transposable element gene 0.63 0.31 -0.3
134 AT3G56820 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.63 0.3 -0.3
135 AT1G01110 IQ-domain 18 IQ-domain 18 0.63 0.3 -0.31
136 AT3G15040 Protein of unknown function, DUF584 0.63 0.29 -0.31
137 AT5G39660 cycling DOF factor 2 cycling DOF factor 2 0.62 0.31 -0.29
138 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 0.62 0.33 -0.33
139 AT5G01380 Homeodomain-like superfamily protein 0.62 0.3 -0.3
140 AT5G56980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.62 0.32 -0.32
141 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 0.62 0.31 -0.3
142 AT4G36790 Major facilitator superfamily protein 0.62 0.31 -0.32
143 AT1G03330 Small nuclear ribonucleoprotein family protein 0.62 0.3 -0.31
144 AT4G31290 ChaC-like family protein 0.62 0.3 -0.33
145 AT3G56520 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 0.62 0.33 -0.33
146 AT4G03480 Ankyrin repeat family protein 0.62 0.32 -0.33
147 AT3G45970 expansin-like A1 expansin-like A1, ATEXPL1, ATHEXP
BETA 2.1, expansin-like A1,
EXPANSIN L1		 0.62 0.31 -0.3
148 AT4G22780 ACT domain repeat 7 ACT domain repeat 7 0.62 0.31 -0.31
149 AT2G23970 Class I glutamine amidotransferase-like superfamily protein 0.62 0.32 -0.3