AT3G60245 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G60245
Description Zinc-binding ribosomal protein family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G60245 Zinc-binding ribosomal protein family protein 1 0.31 -0.34
2 AT3G60770 Ribosomal protein S13/S15 0.95 0.32 -0.31
3 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.94 0.31 -0.32
4 AT2G01250 Ribosomal protein L30/L7 family protein 0.93 0.3 -0.3
5 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B		 0.92 0.32 -0.33
6 AT1G26880 Ribosomal protein L34e superfamily protein 0.92 0.31 -0.31
7 AT3G23390 Zinc-binding ribosomal protein family protein 0.92 0.3 -0.33
8 AT3G53430 Ribosomal protein L11 family protein 0.91 0.34 -0.31
9 AT1G14320 Ribosomal protein L16p/L10e family protein ribosomal protein L10, ribosomal
protein L10 A, SUPPRESSOR OF
ACAULIS 52		 0.91 0.32 -0.32
10 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.91 0.33 -0.32
11 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.91 0.31 -0.32
12 AT3G04840 Ribosomal protein S3Ae 0.9 0.32 -0.3
13 AT3G06680 Ribosomal L29e protein family 0.9 0.31 -0.32
14 AT5G56670 Ribosomal protein S30 family protein 0.9 0.32 -0.3
15 AT5G47210 Hyaluronan / mRNA binding family 0.89 0.31 -0.31
16 AT1G67430 Ribosomal protein L22p/L17e family protein 0.89 0.32 -0.32
17 AT5G56710 Ribosomal protein L31e family protein 0.89 0.33 -0.31
18 AT5G64140 ribosomal protein S28 ribosomal protein S28 0.89 0.31 -0.31
19 AT2G19730 Ribosomal L28e protein family 0.89 0.31 -0.33
20 AT2G34480 Ribosomal protein L18ae/LX family protein 0.89 0.32 -0.32
21 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.89 0.33 -0.33
22 AT5G61170 Ribosomal protein S19e family protein 0.89 0.3 -0.31
23 AT3G54750 unknown protein; Has 145 Blast hits to 145 proteins in 60
species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.89 0.29 -0.3
24 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.88 0.33 -0.29
25 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.88 0.31 -0.31
26 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.88 0.32 -0.33
27 AT4G29410 Ribosomal L28e protein family 0.88 0.32 -0.32
28 AT3G09200 Ribosomal protein L10 family protein 0.88 0.31 -0.29
29 AT3G07110 Ribosomal protein L13 family protein 0.88 0.33 -0.31
30 AT3G09630 Ribosomal protein L4/L1 family 0.88 0.3 -0.31
31 AT3G16780 Ribosomal protein L19e family protein 0.88 0.31 -0.33
32 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.87 0.31 -0.34
33 AT3G11510 Ribosomal protein S11 family protein 0.87 0.32 -0.31
34 AT1G18540 Ribosomal protein L6 family protein 0.87 0.33 -0.3
35 AT5G67510 Translation protein SH3-like family protein 0.87 0.29 -0.33
36 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.87 0.29 -0.31
37 AT3G56340 Ribosomal protein S26e family protein 0.87 0.33 -0.32
38 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.87 0.32 -0.33
39 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.87 0.32 -0.31
40 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 0.87 0.29 -0.34
41 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.87 0.31 -0.32
42 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.87 0.32 -0.33
43 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.86 0.31 -0.33
44 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.86 0.32 -0.3
45 AT3G25520 ribosomal protein L5 ribosomal protein L5, OLIGOCELLULA
5, PIGGYBACK3, RIBOSOMAL PROTEIN
L5 A		 0.86 0.33 -0.32
46 AT4G14320 Zinc-binding ribosomal protein family protein 0.86 0.29 -0.32
47 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.86 0.32 -0.31
48 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.86 0.32 -0.32
49 AT5G15200 Ribosomal protein S4 0.86 0.33 -0.31
50 AT1G79650 Rad23 UV excision repair protein family Arabidopsis thaliana aldehyde
oxidase 1, RADIATION SENSITIVE23B		 0.86 0.3 -0.34
51 AT3G16080 Zinc-binding ribosomal protein family protein 0.86 0.32 -0.34
52 AT4G16720 Ribosomal protein L23/L15e family protein 0.85 0.29 -0.33
53 AT3G58610 ketol-acid reductoisomerase 0.85 0.32 -0.3
54 AT3G05560 Ribosomal L22e protein family 0.85 0.29 -0.3
55 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.85 0.33 -0.3
56 AT1G34030 Ribosomal protein S13/S18 family 0.85 0.3 -0.3
57 AT4G17520 Hyaluronan / mRNA binding family 0.85 0.32 -0.32
58 AT3G47370 Ribosomal protein S10p/S20e family protein 0.85 0.31 -0.33
59 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 0.85 0.32 -0.33
60 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 0.85 0.3 -0.32
61 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.85 0.32 -0.31
62 AT5G27770 Ribosomal L22e protein family 0.85 0.32 -0.3
63 AT5G61000 Replication factor-A protein 1-related ATRPA70D, RPA70D 0.85 0.31 -0.31
64 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.85 0.31 -0.32
65 AT2G21580 Ribosomal protein S25 family protein 0.85 0.31 -0.33
66 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.84 0.32 -0.31
67 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.84 0.31 -0.32
68 AT5G09510 Ribosomal protein S19 family protein 0.84 0.33 -0.3
69 AT1G27400 Ribosomal protein L22p/L17e family protein 0.84 0.32 -0.28
70 AT4G17390 Ribosomal protein L23/L15e family protein 0.84 0.31 -0.31
71 AT1G52300 Zinc-binding ribosomal protein family protein 0.84 0.31 -0.33
72 AT2G39390 Ribosomal L29 family protein 0.84 0.3 -0.29
73 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.84 0.29 -0.32
74 AT1G07070 Ribosomal protein L35Ae family protein 0.84 0.32 -0.31
75 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.84 0.33 -0.32
76 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit		 0.84 0.32 -0.33
77 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.84 0.31 -0.31
78 AT5G41970 Metal-dependent protein hydrolase 0.83 0.32 -0.34
79 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase -0.83 0.32 -0.33
80 AT4G25890 60S acidic ribosomal protein family 0.83 0.33 -0.32
81 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.83 0.32 -0.32
82 AT3G24830 Ribosomal protein L13 family protein 0.83 0.33 -0.31
83 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.83 0.32 -0.31
84 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.83 0.3 -0.33
85 AT3G62120 Class II aaRS and biotin synthetases superfamily protein 0.83 0.32 -0.3
86 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 0.83 0.3 -0.31
87 AT3G02080 Ribosomal protein S19e family protein 0.83 0.29 -0.34
88 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 0.83 0.32 -0.3
89 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 0.82 0.31 -0.33
90 AT1G56070 Ribosomal protein S5/Elongation factor G/III/V family
protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 0.82 0.31 -0.29
91 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 0.82 0.34 -0.31
92 AT5G52650 RNA binding Plectin/S10 domain-containing protein 0.82 0.32 -0.32
93 AT4G33865 Ribosomal protein S14p/S29e family protein 0.82 0.32 -0.32
94 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.82 0.32 -0.34
95 AT3G13230 RNA-binding KH domain-containing protein 0.82 0.3 -0.32
96 AT1G20950 Phosphofructokinase family protein 0.81 0.33 -0.31
97 AT2G32150 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.81 0.32 -0.3
98 AT3G06610 DNA-binding enhancer protein-related 0.81 0.31 -0.3
99 AT2G18480 Major facilitator superfamily protein -0.81 0.32 -0.31
100 AT1G60950 2Fe-2S ferredoxin-like superfamily protein FERREDOXIN 2, FED A 0.81 0.33 -0.32
101 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.81 0.34 -0.33
102 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.81 0.34 -0.32
103 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.81 0.31 -0.32
104 AT4G09320 Nucleoside diphosphate kinase family protein NDPK1 0.81 0.3 -0.32
105 AT1G05840 Eukaryotic aspartyl protease family protein -0.81 0.3 -0.34
106 AT4G39280 phenylalanyl-tRNA synthetase, putative /
phenylalanine--tRNA ligase, putative		 0.81 0.3 -0.34
107 AT1G75560 zinc knuckle (CCHC-type) family protein 0.81 0.31 -0.33
108 AT1G11320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: C globular stage, F mature embryo stage,
petal differentiation and expansion stage, E expanded
cotyledon stage, D bilateral stage; Has 46 Blast hits to 46
proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.81 0.3 -0.31
109 AT1G22930 T-complex protein 11 -0.81 0.28 -0.31
110 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.8 0.32 -0.34
111 AT5G42050 DCD (Development and Cell Death) domain protein -0.79 0.32 -0.31
112 AT5G57550 xyloglucan endotransglucosylase/hydrolase 25 xyloglucan
endotransglucosylase/hydrolase 25,
xyloglucan endotransglycosylase 3		 -0.79 0.32 -0.32
113 AT5G23580 calmodulin-like domain protein kinase 9 ARABIDOPSIS THALIANA
CALMODULIN-LIKE DOMAIN PROTEIN
KINASE 9, ATCPK12, calmodulin-like
domain protein kinase 9,
CALCIUM-DEPENDENT PROTEIN KINASE
12		 -0.78 0.3 -0.31
114 AT5G66650 Protein of unknown function (DUF607) -0.78 0.3 -0.31
115 AT3G51000 alpha/beta-Hydrolases superfamily protein -0.78 0.32 -0.33
116 AT1G65430 IBR domain-containing protein ARIADNE 8, ARABIDOPSIS ARIADNE 8 -0.78 0.32 -0.31
117 AT4G03030 Galactose oxidase/kelch repeat superfamily protein -0.78 0.31 -0.31
118 AT4G20930 6-phosphogluconate dehydrogenase family protein -0.78 0.31 -0.32
119 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.78 0.31 -0.31
120 AT2G27830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits
to 131 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.31 -0.3
121 AT4G17970 aluminum-activated, malate transporter 12 aluminum-activated, malate
transporter 12, ATALMT12		 -0.76 0.33 -0.31
122 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.76 0.32 -0.32
123 AT2G40270 Protein kinase family protein -0.76 0.32 -0.32
124 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.75 0.32 -0.33
125 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b -0.75 0.31 -0.31
126 AT5G24800 basic leucine zipper 9 ARABIDOPSIS THALIANA BASIC LEUCINE
ZIPPER 9, basic leucine zipper 9,
BASIC LEUCINE ZIPPER O2 HOMOLOG 2		 -0.75 0.32 -0.32
127 AT5G38895 RING/U-box superfamily protein -0.75 0.31 -0.31
128 AT3G57520 seed imbibition 2 seed imbibition 2, raffinose
synthase 2, seed imbibition 2		 -0.74 0.32 -0.33
129 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.74 0.33 -0.29
130 AT2G31945 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits
to 61 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.33 -0.31
131 AT2G28400 Protein of unknown function, DUF584 -0.74 0.33 -0.31
132 AT4G28085 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.32 -0.32
133 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.74 0.3 -0.32
134 AT3G27610 Nucleotidylyl transferase superfamily protein -0.73 0.32 -0.31
135 AT5G47070 Protein kinase superfamily protein -0.73 0.32 -0.33
136 AT3G52800 A20/AN1-like zinc finger family protein -0.73 0.31 -0.31
137 AT4G02360 Protein of unknown function, DUF538 -0.73 0.31 -0.3
138 AT5G46350 WRKY DNA-binding protein 8 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 8, WRKY
DNA-binding protein 8		 -0.73 0.32 -0.31
139 AT2G44130 Galactose oxidase/kelch repeat superfamily protein -0.73 0.31 -0.32
140 AT1G74410 RING/U-box superfamily protein -0.72 0.3 -0.31
141 AT3G02340 RING/U-box superfamily protein -0.72 0.29 -0.31
142 AT5G40690 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site
(InterPro:IPR018247); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41730.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.72 0.3 -0.3
143 AT2G40110 Yippee family putative zinc-binding protein -0.72 0.31 -0.32
144 AT4G30390 unknown protein; Has 22 Blast hits to 22 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.31
145 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.72 0.33 -0.31
146 AT4G33940 RING/U-box superfamily protein -0.71 0.31 -0.31
147 AT2G22300 signal responsive 1 CALMODULIN-BINDING TRANSCRIPTION
ACTIVATOR 3, signal responsive 1		 -0.71 0.31 -0.33
148 AT1G78080 related to AP2 4 related to AP2 4, wound induced
dedifferentiation 1		 -0.71 0.32 -0.29
149 AT1G62422 unknown protein; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.33 -0.33
150 AT2G25950 Protein of unknown function (DUF1000) -0.7 0.31 -0.31
151 AT4G32160 Phox (PX) domain-containing protein -0.7 0.31 -0.33
152 AT1G24440 RING/U-box superfamily protein -0.7 0.32 -0.31