AT3G60250 : casein kinase II beta chain 3
Query Information
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AGICode AT3G60250
Description casein kinase II beta chain 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G60250 casein kinase II beta chain 3 casein kinase II beta chain 3 1 0.33 -0.32
2 AT5G14530 Transducin/WD40 repeat-like superfamily protein 0.79 0.33 -0.31
3 AT1G77460 Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein		 -0.76 0.33 -0.31
4 AT3G05500 Rubber elongation factor protein (REF) 0.74 0.33 -0.32
5 AT3G19640 magnesium transporter 4 magnesium transporter 4, MRS2-3 0.74 0.3 -0.32
6 AT1G07420 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol
4-alpha-methyl oxidase 1, sterol
4-alpha-methyl-oxidase 2-1		 0.73 0.34 -0.32
7 AT5G42900 cold regulated gene 27 cold regulated gene 27 0.73 0.3 -0.34
8 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 0.72 0.31 -0.31
9 AT5G11390 WPP domain-interacting protein 1 WPP domain-interacting protein 1 0.71 0.32 -0.29
10 AT2G36320 A20/AN1-like zinc finger family protein 0.7 0.31 -0.31
11 AT1G03040 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.7 0.32 -0.32
12 AT1G20696 high mobility group B3 high mobility group B3, NFD03,
NFD3		 0.7 0.3 -0.32
13 AT5G55380 MBOAT (membrane bound O-acyl transferase) family protein -0.69 0.31 -0.31
14 AT5G02410 DIE2/ALG10 family homolog of yeast ALG10 -0.69 0.33 -0.33
15 AT2G45980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ATG8-interacting protein 1 0.69 0.31 -0.32
16 AT5G42000 ORMDL family protein 0.69 0.33 -0.32
17 AT1G01500 Erythronate-4-phosphate dehydrogenase family protein 0.69 0.31 -0.31
18 AT2G16700 actin depolymerizing factor 5 actin depolymerizing factor 5,
ATADF5		 0.69 0.32 -0.32
19 AT3G57340 Heat shock protein DnaJ, N-terminal with domain of unknown
function (DUF1977)		 0.69 0.3 -0.31
20 AT2G29820 Galactose oxidase/kelch repeat superfamily protein -0.68 0.32 -0.33
21 AT4G33980 BEST Arabidopsis thaliana protein match is: cold regulated
gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.68 0.32 -0.31
22 AT3G10590 Duplicated homeodomain-like superfamily protein 0.68 0.32 -0.34
23 AT5G20420 chromatin remodeling 42 chromatin remodeling 42 -0.68 0.3 -0.34
24 AT2G13680 callose synthase 5 ARABIDOPSIS THALIANA GLUCAN
SYNTHASE-LIKE 2, callose synthase
5, GLUCAN SYNTHASE-LIKE 2		 -0.67 0.32 -0.32
25 AT2G23080 Protein kinase superfamily protein casein kinase II, alpha chain 3 0.67 0.32 -0.31
26 AT5G58650 plant peptide containing sulfated tyrosine 1 plant peptide containing sulfated
tyrosine 1		 0.67 0.31 -0.32
27 AT1G10980 Lung seven transmembrane receptor family protein -0.67 0.33 -0.3
28 AT2G34200 RING/FYVE/PHD zinc finger superfamily protein 0.67 0.33 -0.31
29 AT2G20410 RNA-binding ASCH domain protein 0.66 0.33 -0.31
30 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 -0.66 0.31 -0.32
31 AT5G20880 transposable element gene 0.66 0.3 -0.33
32 AT3G53990 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.66 0.31 -0.34
33 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 0.66 0.3 -0.32
34 AT1G11160 Transducin/WD40 repeat-like superfamily protein -0.65 0.3 -0.31
35 AT5G09390 CD2-binding protein-related 0.65 0.32 -0.31
36 AT1G65220 ARM repeat superfamily protein 0.65 0.31 -0.33
37 AT1G64720 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 CP5 -0.65 0.32 -0.32
38 AT2G40080 Protein of unknown function (DUF1313) EARLY FLOWERING 4 0.65 0.31 -0.3
39 AT1G64040 type one serine/threonine protein phosphatase 3 type one serine/threonine protein
phosphatase 3		 0.64 0.28 -0.32
40 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 0.64 0.32 -0.33
41 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 0.64 0.34 -0.3
42 AT5G13770 Pentatricopeptide repeat (PPR-like) superfamily protein -0.64 0.3 -0.32
43 AT1G21360 glycolipid transfer protein 2 glycolipid transfer protein 2 0.64 0.33 -0.31
44 AT1G22540 Major facilitator superfamily protein -0.64 0.31 -0.3
45 AT5G62880 RAC-like 10 RAC-like 10, ARABIDOPSIS THALIANA
RAC-LIKE 10, RHO-RELATED PROTEIN
FROM PLANTS 11, RAC-like 10,
RHO-related protein from plants 11		 0.64 0.31 -0.31
46 AT3G60260 ELMO/CED-12 family protein 0.64 0.33 -0.32
47 AT5G49400 zinc knuckle (CCHC-type) family protein 0.64 0.31 -0.32
48 AT5G06265 hyaluronan mediated motility receptor-related -0.64 0.31 -0.31
49 AT5G56140 RNA-binding KH domain-containing protein 0.64 0.31 -0.29
50 AT3G56850 ABA-responsive element binding protein 3 ABA-responsive element binding
protein 3, DPBF3		 0.64 0.31 -0.3
51 AT5G59950 RNA-binding (RRM/RBD/RNP motifs) family protein 0.64 0.33 -0.31
52 AT2G23570 methyl esterase 19 ARABIDOPSIS THALIANA METHYL
ESTERASE 19, methyl esterase 19		 -0.63 0.31 -0.34
53 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA 0.63 0.31 -0.31
54 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 0.63 0.32 -0.34
55 AT2G40680 transposable element gene -0.63 0.34 -0.33
56 AT5G63640 ENTH/VHS/GAT family protein 0.63 0.3 -0.33
57 AT5G62640 proline-rich family protein AtELF5, EARLY FLOWERING 5 0.63 0.33 -0.31
58 AT1G28375 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.62 0.31 -0.31
59 AT1G75420 UDP-Glycosyltransferase superfamily protein 0.62 0.3 -0.33
60 AT5G27100 glutamate receptor 2.1 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 2.1, glutamate receptor
2.1		 -0.62 0.3 -0.31
61 AT4G24950 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.33 -0.29
62 AT4G32680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52343.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.62 0.31 -0.32
63 AT3G42440 transposable element gene -0.62 0.31 -0.31
64 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 -0.61 0.29 -0.3
65 AT2G46420 Plant protein 1589 of unknown function -0.61 0.29 -0.31
66 AT2G47330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.33 -0.31
67 AT1G57600 MBOAT (membrane bound O-acyl transferase) family protein -0.61 0.32 -0.31
68 AT3G28490 Oxoglutarate/iron-dependent oxygenase 0.61 0.32 -0.31
69 AT1G69670 cullin 3B ARABIDOPSIS THALIANA CULLIN 3B,
cullin 3B		 0.61 0.3 -0.31
70 AT4G04980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast
hits to 15699 proteins in 1063 species: Archae - 116;
Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants -
3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI
BLink).		 -0.6 0.29 -0.29
71 AT4G19620 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.31 -0.33
72 AT5G48450 SKU5 similar 3 SKU5 similar 3 -0.6 0.33 -0.32
73 AT2G27375 transposable element gene -0.6 0.33 -0.32
74 AT1G09150 pseudouridine synthase and archaeosine transglycosylase
(PUA) domain-containing protein		 0.6 0.33 -0.33
75 AT4G36370 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.35 -0.32
76 AT4G37950 Rhamnogalacturonate lyase family protein -0.59 0.3 -0.32
77 AT1G30560 Major facilitator superfamily protein glycerol-3-phosphate permease 3,
glycerol-3-phosphate permease 3		 -0.59 0.3 -0.32
78 AT5G44330 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.29 -0.33
79 AT1G24000 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.58 0.3 -0.32
80 AT2G05170 vacuolar protein sorting 11 vacuolar protein sorting 11,
vacuolar protein sorting 11		 -0.58 0.35 -0.31
81 AT1G53390 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette G24 -0.58 0.3 -0.3
82 AT5G43800 transposable element gene -0.58 0.32 -0.29
83 AT1G52180 Aquaporin-like superfamily protein -0.58 0.31 -0.31
84 AT4G10490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.57 0.32 -0.34
85 AT3G17310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AtDRM3, domains rearranged
methyltransferase 3		 -0.56 0.31 -0.3
86 AT2G10440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits
to 5104 proteins in 317 species: Archae - 0; Bacteria -
285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses -
18; Other Eukaryotes - 5455 (source: NCBI BLink).		 -0.56 0.33 -0.34
87 AT5G45080 phloem protein 2-A6 phloem protein 2-A6, phloem
protein 2-A6		 -0.56 0.32 -0.33
88 AT4G27850 Glycine-rich protein family -0.56 0.32 -0.34
89 AT1G72500 LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: von Willebrand factor, type A
(InterPro:IPR002035); BEST Arabidopsis thaliana protein
match is: inter-alpha-trypsin inhibitor heavy chain-related
(TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in
307 species: Archae - 6; Bacteria - 522; Metazoa - 484;
Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes -
226 (source: NCBI BLink).		 -0.56 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
90 C0131 Kaempferol-3-O-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside Kaempferol-3-glucoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) -0.78 0.48 -0.45 C0131
91 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.68 0.46 -0.42 C0038
92 C0184 MST_3110.4 - - - -0.66 0.48 -0.45