AT3G60380 : -
Query Information
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AGICode AT3G60380
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G60380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in
424 species: Archae - 6; Bacteria - 372; Metazoa - 2603;
Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes -
2147 (source: NCBI BLink).		 1 0.32 -0.31
2 AT1G24050 RNA-processing, Lsm domain -0.78 0.32 -0.33
3 AT2G05210 Nucleic acid-binding, OB-fold-like protein ATPOT1, Protection of Telomeres 1a 0.78 0.31 -0.3
4 AT4G15550 indole-3-acetate beta-D-glucosyltransferase indole-3-acetate
beta-D-glucosyltransferase		 -0.76 0.3 -0.34
5 AT3G54790 ARM repeat superfamily protein 0.76 0.32 -0.33
6 AT5G11520 aspartate aminotransferase 3 aspartate aminotransferase 3,
YELLOW-LEAF-SPECIFIC GENE 4		 -0.76 0.33 -0.31
7 AT2G27730 copper ion binding -0.76 0.31 -0.32
8 AT5G57300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.75 0.33 -0.3
9 AT2G31750 UDP-glucosyl transferase 74D1 UDP-glucosyl transferase 74D1 -0.75 0.34 -0.31
10 AT3G03680 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.75 0.32 -0.3
11 AT3G12800 short-chain dehydrogenase-reductase B DECR, short-chain
dehydrogenase-reductase B		 -0.75 0.31 -0.31
12 AT5G22890 C2H2 and C2HC zinc fingers superfamily protein -0.74 0.31 -0.31
13 AT3G61070 peroxin 11E peroxin 11E -0.74 0.32 -0.33
14 AT2G35470 unknown protein; Has 25 Blast hits to 25 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.33 -0.31
15 AT1G24180 Thiamin diphosphate-binding fold (THDP-binding) superfamily
protein		 IAA-CONJUGATE-RESISTANT 4 -0.73 0.28 -0.31
16 AT3G15660 glutaredoxin 4 A. THALIANA GLUTAREDOXIN 4,
glutaredoxin 4		 -0.73 0.33 -0.32
17 AT4G12340 copper ion binding -0.72 0.31 -0.32
18 AT5G03700 D-mannose binding lectin protein with Apple-like
carbohydrate-binding domain		 -0.72 0.3 -0.32
19 AT5G16840 binding partner of acd11 1 binding partner of acd11 1 -0.72 0.32 -0.31
20 AT5G60540 pyridoxine biosynthesis 2 PYRIDOXINE BIOSYNTHESIS 2, EMBRYO
DEFECTIVE 2407, pyridoxine
biosynthesis 2		 -0.71 0.31 -0.3
21 AT3G08590 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 2		 -0.71 0.31 -0.3
22 AT5G11550 ARM repeat superfamily protein 0.7 0.3 -0.31
23 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein 0.7 0.33 -0.32
24 AT4G00860 Protein of unknown function (DUF1138) Arabidopsis thaliana ozone-induced
protein 1, ATOZI1		 -0.7 0.32 -0.31
25 AT1G20630 catalase 1 catalase 1 -0.7 0.31 -0.31
26 AT2G32010 CVP2 like 1 CVP2 like 1 0.69 0.32 -0.3
27 AT4G27500 proton pump interactor 1 proton pump interactor 1 -0.69 0.35 -0.32
28 AT4G19865 Galactose oxidase/kelch repeat superfamily protein 0.69 0.31 -0.3
29 AT2G37420 ATP binding microtubule motor family protein 0.69 0.32 -0.3
30 AT4G39520 GTP-binding protein-related -0.69 0.31 -0.33
31 AT5G58620 zinc finger (CCCH-type) family protein -0.68 0.29 -0.3
32 AT3G19570 Family of unknown function (DUF566) QWRF domain containing 1, SNOWY
COTYLEDON 3		 0.68 0.3 -0.32
33 AT1G31690 Copper amine oxidase family protein 0.68 0.32 -0.31
34 AT5G42790 proteasome alpha subunit F1 ARSENIC TOLERANCE 5, ATPSM30,
proteasome alpha subunit F1		 -0.68 0.32 -0.28
35 AT2G01140 Aldolase superfamily protein PIGMENT DEFECTIVE 345 -0.68 0.31 -0.31
36 AT3G02420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0121
(InterPro:IPR005344); Has 72 Blast hits to 71 proteins in
25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.67 0.33 -0.3
37 AT3G23150 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 ethylene response 2 -0.67 0.3 -0.31
38 AT3G44940 Protein of unknown function (DUF1635) 0.67 0.31 -0.32
39 AT3G04010 O-Glycosyl hydrolases family 17 protein -0.67 0.31 -0.33
40 AT4G27540 prenylated RAB acceptor 1.H prenylated RAB acceptor 1.H -0.67 0.32 -0.3
41 AT1G71730 unknown protein; Has 52 Blast hits to 52 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.67 0.32 -0.31
42 AT5G49810 methionine S-methyltransferase methionine S-methyltransferase -0.67 0.33 -0.31
43 AT5G58710 rotamase CYP 7 rotamase CYP 7 -0.67 0.31 -0.32
44 AT4G14950 SNARE associated Golgi protein family Killing Me Slowly 1 -0.67 0.32 -0.31
45 AT3G18710 plant U-box 29 ARABIDOPSIS THALIANA PLANT U-BOX
29, plant U-box 29		 0.66 0.32 -0.32
46 AT1G64230 ubiquitin-conjugating enzyme 28 ubiquitin-conjugating enzyme 28 -0.66 0.33 -0.31
47 AT5G53920 ribosomal protein L11 methyltransferase-related -0.66 0.31 -0.35
48 AT1G59620 Disease resistance protein (CC-NBS-LRR class) family CW9 0.66 0.33 -0.32
49 AT4G11120 translation elongation factor Ts (EF-Ts), putative -0.66 0.31 -0.32
50 AT1G66340 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 AtETR1, ETHYLENE INSENSITIVE 1,
ETHYLENE RESPONSE, ETHYLENE
RESPONSE 1		 -0.66 0.3 -0.32
51 AT3G12570 FYD FYD -0.66 0.31 -0.32
52 AT3G07760 Sterile alpha motif (SAM) domain-containing protein -0.66 0.34 -0.31
53 AT2G02730 Protein of unknown function (DUF1664) -0.66 0.33 -0.3
54 AT4G16180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G28720.1); Has 5 Blast hits to 5
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 -0.66 0.33 -0.32
55 AT3G28420 Putative membrane lipoprotein 0.66 0.35 -0.31
56 AT5G18800 Cox19-like CHCH family protein -0.66 0.33 -0.3
57 AT5G08060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 16 growth stages; Has 42 Blast hits to 42 proteins
in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 -0.66 0.33 -0.32
58 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.66 0.31 -0.31
59 AT5G15090 voltage dependent anion channel 3 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 3, voltage
dependent anion channel 3		 -0.65 0.31 -0.32
60 AT1G31460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23270.1); Has 1251
Blast hits to 756 proteins in 185 species: Archae - 0;
Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58;
Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink).		 0.65 0.32 -0.32
61 AT1G79390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.65 0.29 -0.28
62 AT1G77380 amino acid permease 3 amino acid permease 3, ATAAP3 -0.65 0.32 -0.32
63 AT3G20630 ubiquitin-specific protease 14 ATUBP14, phosphate deficiency root
hair defective1, TITAN6,
ubiquitin-specific protease 14		 -0.65 0.32 -0.34
64 AT3G27240 Cytochrome C1 family -0.65 0.31 -0.31
65 AT5G49690 UDP-Glycosyltransferase superfamily protein -0.65 0.32 -0.32
66 AT1G66240 homolog of anti-oxidant 1 ATATX1, homolog of anti-oxidant 1 -0.65 0.3 -0.3
67 AT5G37010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259
proteins in 486 species: Archae - 7; Bacteria - 485;
Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50;
Other Eukaryotes - 1741 (source: NCBI BLink).		 0.65 0.34 -0.31
68 AT3G54110 plant uncoupling mitochondrial protein 1 ARABIDOPSIS THALIANA PLANT
UNCOUPLING MITOCHONDRIAL PROTEIN
1, ARABIDOPSIS THALIANA UNCOUPLING
PROTEIN 1, plant uncoupling
mitochondrial protein 1, UCP,
UNCOUPLING PROTEIN 1		 -0.65 0.32 -0.32
69 AT3G54030 Protein kinase protein with tetratricopeptide repeat domain -0.65 0.32 -0.34
70 AT4G26790 GDSL-like Lipase/Acylhydrolase superfamily protein 0.64 0.32 -0.3
71 AT2G15740 C2H2-like zinc finger protein 0.64 0.32 -0.3
72 AT1G78950 Terpenoid cyclases family protein 0.64 0.3 -0.34
73 AT5G51600 Microtubule associated protein (MAP65/ASE1) family protein ARABIDOPSIS THALIANA
MICROTUBULE-ASSOCIATED PROTEIN
65-3, MICROTUBULE-ASSOCIATED
PROTEIN 65-3, PLEIADE		 0.64 0.3 -0.31
74 AT1G26600 CLAVATA3/ESR-RELATED 9 CLAVATA3/ESR-RELATED 9 0.64 0.29 -0.33
75 AT1G69230 SPIRAL1-like2 SPIRAL1-like2 0.63 0.3 -0.32
76 AT5G67460 O-Glycosyl hydrolases family 17 protein 0.63 0.33 -0.33
77 AT1G70430 Protein kinase superfamily protein 0.63 0.3 -0.32
78 AT2G45720 ARM repeat superfamily protein 0.62 0.31 -0.29
79 AT1G03270 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.62 0.34 -0.31
80 AT4G34510 3-ketoacyl-CoA synthase 17 3-ketoacyl-CoA synthase 17 0.62 0.32 -0.33
81 AT1G12280 LRR and NB-ARC domains-containing disease resistance
protein		 0.62 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
82 C0009 myo-Inositol - myo-Inositol stachyose biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
D-myo-inositol (1,4,5)-trisphosphate degradation,
galactosylcyclitol biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
phytate degradation I,
myo-inositol biosynthesis,
ajugose biosynthesis I (galactinol-dependent),
phospholipid biosynthesis II 		0.7 0.47 -0.46 C0009