AT3G60400 : -
Query Information
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AGICode AT3G60400
Description Mitochondrial transcription termination factor family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G60400 Mitochondrial transcription termination factor family
protein		 1 0.31 -0.3
2 AT3G58460 RHOMBOID-like protein 15 RHOMBOID-like protein 15,
RHOMBOID-like protein 15		 -0.74 0.31 -0.3
3 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 -0.73 0.31 -0.34
4 AT5G41080 PLC-like phosphodiesterases superfamily protein AtGDPD2, glycerophosphodiester
phosphodiesterase 2		 -0.73 0.31 -0.32
5 AT5G13610 Protein of unknown function (DUF155) -0.72 0.33 -0.3
6 AT5G11680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, plasma
membrane; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
WW-domain-binding protein (InterPro:IPR018826); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.72 0.31 -0.31
7 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.72 0.33 -0.32
8 AT3G57480 zinc finger (C2H2 type, AN1-like) family protein -0.71 0.3 -0.31
9 AT2G35635 ubiquitin 7 RELATED TO UBIQUITIN 2, ubiquitin
7		 -0.71 0.3 -0.32
10 AT3G10640 SNF7 family protein VPS60.1 -0.71 0.32 -0.3
11 AT2G25310 Protein of unknown function (DUF2012) -0.71 0.3 -0.33
12 AT3G63080 glutathione peroxidase 5 glutathione peroxidase 5,
glutathione peroxidase 5, maternal
effect embryo arrest 42		 -0.7 0.32 -0.33
13 AT2G28550 related to AP2.7 related to AP2.7, TARGET OF EARLY
ACTIVATION TAGGED (EAT) 1		 0.7 0.33 -0.3
14 AT1G18680 HNH endonuclease domain-containing protein -0.7 0.31 -0.32
15 AT3G11780 MD-2-related lipid recognition domain-containing protein /
ML domain-containing protein		 -0.7 0.29 -0.32
16 AT5G03450 Transducin/WD40 repeat-like superfamily protein 0.7 0.29 -0.31
17 AT4G38470 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase
46		 -0.7 0.32 -0.33
18 AT3G13780 SMAD/FHA domain-containing protein -0.69 0.3 -0.32
19 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.69 0.32 -0.31
20 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 -0.69 0.31 -0.32
21 AT2G32260 phosphorylcholine cytidylyltransferase ATCCT1, phosphorylcholine
cytidylyltransferase		 -0.69 0.3 -0.32
22 AT1G79880 RNA recognition motif (RRM)-containing protein 0.69 0.32 -0.34
23 AT4G38930 Ubiquitin fusion degradation UFD1 family protein -0.69 0.34 -0.31
24 AT2G21480 Malectin/receptor-like protein kinase family protein 0.69 0.31 -0.34
25 AT3G62790 NADH-ubiquinone oxidoreductase-related -0.68 0.32 -0.3
26 AT3G11270 Mov34/MPN/PAD-1 family protein maternal effect embryo arrest 34 -0.68 0.33 -0.32
27 AT5G10800 RNA recognition motif (RRM)-containing protein 0.68 0.32 -0.3
28 AT1G72290 Kunitz family trypsin and protease inhibitor protein 0.68 0.31 -0.31
29 AT2G43790 MAP kinase 6 MAP kinase 6, MAP kinase 6, MAP
kinase 6, MAP kinase 6		 -0.68 0.33 -0.31
30 AT1G68680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 16 growth stages; Has 20 Blast hits to 20 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.68 0.33 -0.31
31 AT3G27430 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBB1 -0.68 0.32 -0.31
32 AT4G30500 Protein of unknown function (DUF788) -0.68 0.32 -0.31
33 AT2G17380 associated protein 19 associated protein 19 -0.67 0.3 -0.33
34 AT5G03680 Duplicated homeodomain-like superfamily protein PETAL LOSS 0.67 0.31 -0.31
35 AT5G09570 Cox19-like CHCH family protein -0.67 0.32 -0.35
36 AT5G43280 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
DELTA(3,5),DELTA(2,4)-DIENOYL-COA
ISOMERASE 1		 -0.67 0.32 -0.33
37 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 0.67 0.31 -0.33
38 AT2G40060 Clathrin light chain protein clathrin light chain 2 -0.66 0.3 -0.33
39 ATMG00110 cytochrome C biogenesis 206 ATP-binding cassette I2,
cytochrome C biogenesis 206		 -0.66 0.31 -0.33
40 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 0.66 0.31 -0.32
41 AT5G47740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.66 0.3 -0.32
42 AT3G02810 Protein kinase superfamily protein -0.66 0.31 -0.31
43 AT4G15800 ralf-like 33 ralf-like 33 -0.66 0.32 -0.33
44 AT3G54350 Forkhead-associated (FHA) domain-containing protein embryo defective 1967 0.66 0.31 -0.3
45 AT5G22950 SNF7 family protein VPS24.1 -0.66 0.34 -0.32
46 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 -0.65 0.32 -0.33
47 AT5G03060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast
hits to 10808 proteins in 1083 species: Archae - 280;
Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571;
Viruses - 106; Other Eukaryotes - 5165 (source: NCBI
BLink).		 0.65 0.31 -0.31
48 AT5G40660 ATP12 protein-related -0.65 0.31 -0.34
49 AT3G17100 sequence-specific DNA binding transcription factors -0.65 0.3 -0.31
50 AT2G18040 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 peptidylprolyl cis/trans
isomerase, NIMA-interacting 1		 -0.65 0.3 -0.3
51 AT3G16060 ATP binding microtubule motor family protein 0.65 0.31 -0.32
52 AT3G63460 transducin family protein / WD-40 repeat family protein -0.65 0.3 -0.31
53 AT3G15290 3-hydroxyacyl-CoA dehydrogenase family protein -0.65 0.29 -0.31
54 AT3G50210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.32 -0.31
55 AT1G61150 LisH and RanBPM domains containing protein -0.64 0.32 -0.32
56 AT2G42670 Protein of unknown function (DUF1637) -0.64 0.3 -0.34
57 AT5G65260 RNA-binding (RRM/RBD/RNP motifs) family protein -0.64 0.31 -0.34
58 AT5G65710 HAESA-like 2 HAESA-like 2 0.64 0.32 -0.3
59 AT3G18120 F-box associated ubiquitination effector family protein 0.64 0.31 -0.32
60 AT1G24575 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.31 -0.3
61 AT5G11500 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF814 (InterPro:IPR008532); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.29 -0.33
62 AT1G14550 Peroxidase superfamily protein 0.64 0.31 -0.32
63 AT1G77230 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.32 -0.31
64 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 0.64 0.3 -0.33
65 AT5G08350 GRAM domain-containing protein / ABA-responsive
protein-related		 -0.63 0.29 -0.31
66 AT5G45400 Replication factor-A protein 1-related ATRPA70C, RPA70C 0.63 0.34 -0.29
67 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 0.63 0.29 -0.32
68 AT3G02780 isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase 2		 ATISOPENTENYL DIPHOSPHE ISOMERASE
2, IPIAT1, isopentenyl
pyrophosphate:dimethylallyl
pyrophosphate isomerase 2		 -0.63 0.34 -0.3
69 AT4G34270 TIP41-like family protein -0.63 0.32 -0.31
70 AT1G14940 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.31 -0.3
71 AT3G51530 F-box/RNI-like/FBD-like domains-containing protein -0.63 0.34 -0.29
72 AT2G19560 proteasome family protein AtTHP1, ENHANCED ETHYLENE RESPONSE
5, ectopic expression of seed
storage proteins 1		 -0.63 0.32 -0.31
73 AT2G39970 Mitochondrial substrate carrier family protein ABERRANT PEROXISOME MORPHOLOGY 3,
peroxisomal membrane protein 38,
peroxisomal NAD carrier		 -0.63 0.31 -0.31
74 AT5G34930 arogenate dehydrogenase -0.63 0.32 -0.31
75 AT4G16130 arabinose kinase arabinose kinase, ATISA1, ISA1 -0.63 0.32 -0.3
76 AT2G47250 RNA helicase family protein 0.63 0.31 -0.32
77 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 -0.62 0.33 -0.32
78 AT1G63850 BTB/POZ domain-containing protein 0.62 0.31 -0.31
79 AT5G17640 Protein of unknown function (DUF1005) -0.62 0.32 -0.33
80 AT5G53660 growth-regulating factor 7 growth-regulating factor 7,
growth-regulating factor 7		 0.62 0.33 -0.33
81 AT1G75220 Major facilitator superfamily protein AtERDL6, ERD6-like 6 -0.62 0.32 -0.31
82 AT5G27940 WPP domain protein 3 WPP domain protein 3 0.62 0.32 -0.33
83 AT4G01897 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF952 (InterPro:IPR009297); Has 763 Blast
hits to 763 proteins in 180 species: Archae - 0; Bacteria -
351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0;
Other Eukaryotes - 383 (source: NCBI BLink).		 -0.62 0.3 -0.32
84 AT1G69370 chorismate mutase 3 cm-3, chorismate mutase 3 -0.62 0.32 -0.34
85 AT1G56310 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.62 0.31 -0.32
86 AT3G18524 MUTS homolog 2 ATMSH2, MUTS homolog 2 0.62 0.32 -0.3
87 AT3G61160 Protein kinase superfamily protein 0.62 0.31 -0.32
88 AT3G61940 Cation efflux family protein ATMTPA1, MTPA1 0.62 0.33 -0.33
89 AT4G04050 transposable element gene 0.62 0.31 -0.36
90 AT5G19960 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.32 -0.31
91 AT5G13230 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.33 -0.34
92 AT1G23960 Protein of unknown function (DUF626) -0.62 0.32 -0.31
93 AT4G08930 APR-like 6 APR-like 6, APR-like 6 -0.62 0.33 -0.33
94 AT5G02000 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.31 -0.29
95 AT4G28150 Protein of unknown function (DUF789) 0.61 0.34 -0.3
96 AT3G61400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.31 -0.31
97 AT3G17300 unknown protein; Has 48 Blast hits to 48 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 At3g17300 -0.61 0.3 -0.33
98 AT1G35330 RING/U-box superfamily protein -0.61 0.31 -0.31
99 AT1G68340 Protein of unknown function (DUF1639) -0.61 0.32 -0.3
100 AT3G20800 Cell differentiation, Rcd1-like protein -0.61 0.32 -0.32
101 AT1G67250 Proteasome maturation factor UMP1 -0.61 0.29 -0.32
102 AT2G38480 Uncharacterised protein family (UPF0497) -0.61 0.35 -0.31
103 AT1G63430 Leucine-rich repeat protein kinase family protein 0.61 0.29 -0.31
104 AT4G15430 ERD (early-responsive to dehydration stress) family protein 0.61 0.33 -0.31
105 AT1G32460 unknown protein; Has 19 Blast hits to 19 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.32
106 AT3G14780 CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant
(InterPro:IPR004252); BEST Arabidopsis thaliana protein
match is: glucan synthase-like 4 (TAIR:AT3G14570.2); Has
315 Blast hits to 313 proteins in 50 species: Archae - 2;
Bacteria - 16; Metazoa - 11; Fungi - 7; Plants - 181;
Viruses - 2; Other Eukaryotes - 96 (source: NCBI BLink).		 -0.61 0.31 -0.32
107 AT4G13340 Leucine-rich repeat (LRR) family protein leucine-rich repeat/extensin 3 -0.61 0.31 -0.32
108 AT4G11440 Mitochondrial substrate carrier family protein 0.6 0.31 -0.32
109 AT5G59430 telomeric repeat binding protein 1 TELOMERE REPEAT BINDING PROTEIN 1,
telomeric repeat binding protein 1		 0.6 0.31 -0.31
110 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 0.6 0.32 -0.32
111 AT2G29110 glutamate receptor 2.8 glutamate receptor 2.8, GLR2.8,
glutamate receptor 2.8		 0.6 0.32 -0.31
112 AT4G27510 unknown protein; Has 25 Blast hits to 23 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.34 -0.31
113 AT2G35510 similar to RCD one 1 similar to RCD one 1 0.6 0.32 -0.33
114 AT5G07880 synaptosomal-associated protein SNAP25-like 29 ARABIDOPSIS THALIANA
SYNAPTOSOMAL-ASSOCIATED PROTEIN
SNAP25-LIKE 29,
synaptosomal-associated protein
SNAP25-like 29		 0.6 0.33 -0.31
115 AT1G20150 Subtilisin-like serine endopeptidase family protein 0.6 0.34 -0.32
116 AT1G72410 COP1-interacting protein-related 0.59 0.31 -0.31
117 AT4G33905 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.59 0.32 -0.32
118 AT5G07130 laccase 13 laccase 13 0.59 0.33 -0.28
119 AT4G19470 Leucine-rich repeat (LRR) family protein 0.59 0.33 -0.32
120 AT1G59530 basic leucine-zipper 4 basic leucine-zipper 4, basic
leucine-zipper 4		 0.59 0.31 -0.32
121 AT5G39700 myb domain protein 89 myb domain protein 89, myb domain
protein 89		 0.58 0.32 -0.33
122 AT1G55270 Galactose oxidase/kelch repeat superfamily protein 0.58 0.3 -0.32
123 AT3G23330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.31 -0.32
124 AT1G19340 Methyltransferase MT-A70 family protein 0.58 0.33 -0.33
125 AT5G16380 Protein of unknown function, DUF538 0.58 0.31 -0.33
126 AT4G13570 histone H2A 4 histone H2A 4 0.58 0.3 -0.28
127 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.33 -0.31
128 AT4G08490 transposable element gene 0.58 0.32 -0.31
129 AT1G66310 F-box/RNI-like/FBD-like domains-containing protein 0.57 0.3 -0.3
130 AT2G36270 Basic-leucine zipper (bZIP) transcription factor family
protein		 ABA INSENSITIVE 5,
GROWTH-INSENSITIVITY TO ABA 1		 0.57 0.33 -0.33
131 AT1G32610 hydroxyproline-rich glycoprotein family protein 0.57 0.32 -0.33
132 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 0.57 0.3 -0.32
133 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.32 -0.32