AGICode | AT3G60550 |
Description | cyclin p3;2 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G60550 | cyclin p3;2 | cyclin p3;2 | 1 | 0.32 | -0.33 | ||
2 | AT5G65890 | ACT domain repeat 1 | ACT domain repeat 1 | -0.8 | 0.34 | -0.33 | ||
3 | AT2G26770 | plectin-related | stomatal closure-related actin binding protein 1 |
-0.73 | 0.3 | -0.31 | ||
4 | AT4G39070 | B-box zinc finger family protein | 0.72 | 0.31 | -0.32 | |||
5 | AT3G56050 | Protein kinase family protein | -0.71 | 0.31 | -0.32 | |||
6 | AT3G48100 | response regulator 5 | response regulator 5, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, INDUCED BY CYTOKININ 6, response regulator 5 |
0.71 | 0.33 | -0.3 | ||
7 | AT4G33040 | Thioredoxin superfamily protein | -0.7 | 0.32 | -0.32 | |||
8 | AT1G33270 | Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein |
-0.69 | 0.32 | -0.32 | |||
9 | AT5G17450 | Heavy metal transport/detoxification superfamily protein | heavy metal associated isoprenylated plant protein 21 |
-0.68 | 0.3 | -0.3 | ||
10 | AT2G24420 | DNA repair ATPase-related | -0.68 | 0.31 | -0.3 | |||
11 | AT3G49940 | LOB domain-containing protein 38 | LOB domain-containing protein 38 | 0.68 | 0.33 | -0.31 | ||
12 | AT1G19600 | pfkB-like carbohydrate kinase family protein | 0.68 | 0.32 | -0.31 | |||
13 | AT5G60190 | Cysteine proteinases superfamily protein | 0.68 | 0.31 | -0.34 | |||
14 | AT5G38700 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.31 | -0.29 | |||
15 | AT5G61810 | Mitochondrial substrate carrier family protein | ATP/phosphate carrier 1 | -0.67 | 0.33 | -0.32 | ||
16 | AT3G04030 | Homeodomain-like superfamily protein | -0.66 | 0.31 | -0.31 | |||
17 | AT1G52540 | Protein kinase superfamily protein | -0.66 | 0.33 | -0.32 | |||
18 | AT1G19380 | Protein of unknown function (DUF1195) | 0.66 | 0.33 | -0.3 | |||
19 | AT5G40540 | Protein kinase superfamily protein | 0.66 | 0.31 | -0.32 | |||
20 | AT1G30370 | alpha/beta-Hydrolases superfamily protein | DAD1-like acylhydrolase | 0.66 | 0.34 | -0.31 | ||
21 | AT1G69610 | Protein of unknown function (DUF1666) | -0.65 | 0.32 | -0.32 | |||
22 | AT5G13640 | phospholipid:diacylglycerol acyltransferase | ARABIDOPSIS THALIANA PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE, phospholipid:diacylglycerol acyltransferase, PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 |
-0.65 | 0.33 | -0.33 | ||
23 | AT4G26850 | mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase |
vitamin c defective 2 | -0.65 | 0.28 | -0.32 | ||
24 | AT2G17300 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.31 | -0.31 | |||
25 | AT1G05170 | Galactosyltransferase family protein | -0.65 | 0.31 | -0.32 | |||
26 | AT5G65320 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.65 | 0.3 | -0.33 | |||
27 | AT5G56870 | beta-galactosidase 4 | beta-galactosidase 4 | 0.64 | 0.32 | -0.3 | ||
28 | AT5G01260 | Carbohydrate-binding-like fold | -0.64 | 0.31 | -0.34 | |||
29 | AT5G62130 | Per1-like family protein | -0.63 | 0.33 | -0.32 | |||
30 | AT4G23990 | cellulose synthase like G3 | ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE G3, cellulose synthase like G3 |
-0.63 | 0.33 | -0.31 | ||
31 | AT2G39750 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.63 | 0.32 | -0.32 | |||
32 | AT3G21670 | Major facilitator superfamily protein | -0.63 | 0.3 | -0.32 | |||
33 | AT3G22750 | Protein kinase superfamily protein | 0.63 | 0.33 | -0.31 | |||
34 | AT3G61970 | AP2/B3-like transcriptional factor family protein | NGATHA2 | -0.63 | 0.31 | -0.33 | ||
35 | AT4G00430 | plasma membrane intrinsic protein 1;4 | plasma membrane intrinsic protein 1;4, PLASMA MEMBRANE INTRINSIC PROTEIN 1E, TRANSMEMBRANE PROTEIN C |
-0.63 | 0.32 | -0.32 | ||
36 | AT2G46340 | SPA (suppressor of phyA-105) protein family | SUPPRESSOR OF PHYA-105 1 | -0.62 | 0.32 | -0.31 | ||
37 | AT1G14920 | GRAS family transcription factor family protein | GIBBERELLIC ACID INSENSITIVE, RESTORATION ON GROWTH ON AMMONIA 2 |
-0.62 | 0.31 | -0.32 | ||
38 | AT3G55130 | white-brown complex homolog 19 | ATP-binding cassette G19, white-brown complex homolog 19, white-brown complex homolog 19 |
-0.62 | 0.31 | -0.32 | ||
39 | AT3G13590 | Cysteine/Histidine-rich C1 domain family protein | -0.62 | 0.31 | -0.31 | |||
40 | AT3G15630 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.31 | -0.3 | |||
41 | AT1G44830 | Integrase-type DNA-binding superfamily protein | 0.62 | 0.32 | -0.31 | |||
42 | AT1G10640 | Pectin lyase-like superfamily protein | -0.61 | 0.33 | -0.34 | |||
43 | AT4G32800 | Integrase-type DNA-binding superfamily protein | 0.61 | 0.31 | -0.32 | |||
44 | AT2G26710 | Cytochrome P450 superfamily protein | PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 |
0.61 | 0.31 | -0.29 | ||
45 | AT4G27435 | Protein of unknown function (DUF1218) | -0.6 | 0.3 | -0.33 | |||
46 | AT2G31810 | ACT domain-containing small subunit of acetolactate synthase protein |
0.6 | 0.3 | -0.31 | |||
47 | AT5G38220 | alpha/beta-Hydrolases superfamily protein | -0.6 | 0.31 | -0.3 | |||
48 | AT3G56260 | unknown protein; Has 20 Blast hits to 19 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 10; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.6 | 0.31 | -0.3 | |||
49 | AT1G09575 | Protein of unknown function (DUF607) | 0.6 | 0.32 | -0.32 | |||
50 | AT3G20160 | Terpenoid synthases superfamily protein | 0.6 | 0.31 | -0.33 | |||
51 | AT3G51250 | Senescence/dehydration-associated protein-related | -0.59 | 0.31 | -0.3 | |||
52 | AT1G73670 | MAP kinase 15 | MAP kinase 15, MAP kinase 15 | -0.59 | 0.31 | -0.33 | ||
53 | AT1G11540 | Sulfite exporter TauE/SafE family protein | 0.59 | 0.32 | -0.34 | |||
54 | AT2G19780 | Leucine-rich repeat (LRR) family protein | -0.59 | 0.31 | -0.32 | |||
55 | AT1G63970 | isoprenoid F | isoprenoid F, 2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE |
-0.59 | 0.33 | -0.33 | ||
56 | AT4G32600 | RING/U-box superfamily protein | -0.59 | 0.31 | -0.34 | |||
57 | AT5G46240 | potassium channel in Arabidopsis thaliana 1 | potassium channel in Arabidopsis thaliana 1 |
-0.59 | 0.33 | -0.31 | ||
58 | AT3G61220 | NAD(P)-binding Rossmann-fold superfamily protein | short-chain dehydrogenase/reductase 1 |
-0.58 | 0.31 | -0.33 | ||
59 | AT3G46980 | phosphate transporter 4;3 | phosphate transporter 4;3 | -0.58 | 0.32 | -0.32 | ||
60 | AT5G52570 | beta-carotene hydroxylase 2 | B2, BETA CAROTENOID HYDROXYLASE 2, beta-carotene hydroxylase 2, CHY2 |
-0.58 | 0.31 | -0.34 | ||
61 | AT1G48690 | Auxin-responsive GH3 family protein | 0.58 | 0.32 | -0.33 | |||
62 | AT2G33020 | receptor like protein 24 | receptor like protein 24, receptor like protein 24 |
-0.58 | 0.31 | -0.31 | ||
63 | AT4G37760 | squalene epoxidase 3 | squalene epoxidase 3 | -0.58 | 0.33 | -0.34 | ||
64 | AT1G73270 | serine carboxypeptidase-like 6 | serine carboxypeptidase-like 6 | 0.57 | 0.31 | -0.3 | ||
65 | AT2G16750 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
0.57 | 0.32 | -0.31 | |||
66 | AT5G59070 | UDP-Glycosyltransferase superfamily protein | 0.57 | 0.33 | -0.32 | |||
67 | AT3G50340 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67020.1); Has 128 Blast hits to 128 proteins in 39 species: Archae - 0; Bacteria - 46; Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.57 | 0.33 | -0.32 | |||
68 | AT1G09180 | secretion-associated RAS super family 1 | SECRETION-ASSOCIATED RAS 1, secretion-associated RAS super family 1, secretion-associated RAS super family 1 |
-0.57 | 0.33 | -0.34 | ||
69 | AT5G03670 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink). |
0.57 | 0.31 | -0.32 | |||
70 | AT3G29760 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.57 | 0.31 | -0.3 | |||
71 | AT4G01210 | glycosyl transferase family 1 protein | -0.57 | 0.29 | -0.32 | |||
72 | AT4G21590 | endonuclease 3 | endonuclease 3 | 0.56 | 0.31 | -0.3 | ||
73 | AT3G47840 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.56 | 0.33 | -0.3 | |||
74 | AT2G44110 | Seven transmembrane MLO family protein | MILDEW RESISTANCE LOCUS O 15, MILDEW RESISTANCE LOCUS O 15 |
0.56 | 0.32 | -0.31 | ||
75 | AT5G40460 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.32 | -0.34 | |||
76 | AT5G52830 | WRKY DNA-binding protein 27 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 27, WRKY DNA-binding protein 27 |
0.56 | 0.32 | -0.33 | ||
77 | AT3G49790 | Carbohydrate-binding protein | 0.56 | 0.3 | -0.29 | |||
78 | AT5G05860 | UDP-glucosyl transferase 76C2 | UDP-glucosyl transferase 76C2 | 0.56 | 0.29 | -0.3 | ||
79 | AT5G42830 | HXXXD-type acyl-transferase family protein | 0.55 | 0.31 | -0.31 | |||
80 | AT2G41010 | calmodulin (CAM)-binding protein of 25 kDa | calmodulin (CAM)-binding protein of 25 kDa, calmodulin (CAM)-binding protein of 25 kDa |
0.55 | 0.31 | -0.33 | ||
81 | AT2G25160 | cytochrome P450, family 82, subfamily F, polypeptide 1 | cytochrome P450, family 82, subfamily F, polypeptide 1 |
0.55 | 0.31 | -0.3 | ||
82 | AT1G72950 | Disease resistance protein (TIR-NBS class) | 0.54 | 0.33 | -0.32 | |||
83 | AT1G72220 | RING/U-box superfamily protein | 0.54 | 0.3 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
84 | C0225 | Raffinose | D-(+)-Raffinose | Raffinose | ajugose biosynthesis II (galactinol-independent), stachyose biosynthesis, stachyose degradation |
-0.85 | 0.43 | -0.49 | ||
85 | C0151 | Monogalactosyldiacylgycerol-34:4 | - | a Monogalactosyldiacylgycerol | glycolipid biosynthesis, triacylglycerol degradation, linoleate biosynthesis I, glutathione redox reactions I |
0.72 | 0.53 | -0.49 | ||
86 | C0210 | Phytol | E-Phytol | Phytol | chlorophyll a degradation II, chlorophyll a degradation, phytol salvage pathway |
-0.71 | 0.43 | -0.44 | ||
87 | C0121 | Isoheptylglucosinolate | - | - | - | 0.67 | 0.46 | -0.44 | ||
88 | C0092 | Fumaric acid | - | Fumarate | citrulline-nitric oxide cycle, succinate + a ubiquinone -> a ubiquinol + fumarate, superpathway of glyoxylate cycle and fatty acid degradation, tyrosine degradation I, aerobic respiration (alternative oxidase pathway), inosine-5'-phosphate biosynthesis II, arginine biosynthesis I, TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), purine nucleotide metabolism (phosphotransfer and nucleotide modification), purine nucleotides de novo biosynthesis II, arginine biosynthesis II (acetyl cycle), urea cycle, aerobic respiration (cytochrome c) |
-0.61 | 0.33 | -0.32 | ||
89 | C0179 | MST_2494.8 | - | - | - | 0.61 | 0.32 | -0.31 |