AT3G59980 : -
Query Information
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AGICode AT3G59980
Description Nucleic acid-binding, OB-fold-like protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G59980 Nucleic acid-binding, OB-fold-like protein 1 0.31 -0.33
2 AT1G33810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.92 0.31 -0.31
3 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.91 0.31 -0.33
4 AT4G25050 acyl carrier protein 4 acyl carrier protein 4 0.9 0.32 -0.32
5 AT1G56050 GTP-binding protein-related 0.89 0.32 -0.32
6 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.89 0.3 -0.31
7 AT1G15140 FAD/NAD(P)-binding oxidoreductase 0.89 0.33 -0.31
8 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.89 0.31 -0.32
9 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.89 0.32 -0.32
10 AT3G08740 elongation factor P (EF-P) family protein 0.88 0.3 -0.31
11 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5		 nascent polypeptide-associated
complex subunit alpha-like protein
5		 0.88 0.34 -0.31
12 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.32 -0.34
13 AT2G02740 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 3, PLASTID
TRANSCRIPTIONALLY ACTIVE11, WHIRLY
3		 0.88 0.32 -0.32
14 AT3G17210 heat stable protein 1 A. THALIANA HEAT STABLE PROTEIN 1,
heat stable protein 1		 0.88 0.33 -0.3
15 AT1G11430 plastid developmental protein DAG, putative 0.87 0.32 -0.3
16 AT3G10520 haemoglobin 2 haemoglobin 2, ARATH GLB2,
ARABIDOPSIS HEMOGLOBIN 2,
HEMOGLOBIN 2, haemoglobin 2,
NON-SYMBIOTIC HAEMOGLOBIN 2		 0.87 0.32 -0.3
17 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.87 0.31 -0.29
18 AT4G34190 stress enhanced protein 1 stress enhanced protein 1 0.87 0.31 -0.29
19 AT5G17710 Co-chaperone GrpE family protein embryo defective 1241 0.87 0.31 -0.32
20 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.87 0.33 -0.3
21 AT5G20720 chaperonin 20 ATCPN21, CHLOROPLAST CHAPERONIN
10, CHLOROPLAST CHAPERONIN 10,
chaperonin 20, CPN21		 0.87 0.33 -0.31
22 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.87 0.32 -0.31
23 AT3G15850 fatty acid desaturase 5 ADS3, fatty acid desaturase 5,
FATTY ACID DESATURASE B, JB67		 0.86 0.35 -0.3
24 AT4G17560 Ribosomal protein L19 family protein 0.86 0.31 -0.31
25 AT3G58610 ketol-acid reductoisomerase 0.86 0.31 -0.34
26 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.86 0.32 -0.32
27 AT2G31170 Cysteinyl-tRNA synthetase, class Ia family protein FIONA, cysteinyl t-RNA synthetase 0.86 0.31 -0.32
28 AT3G20250 pumilio 5 pumilio 5, pumilio 5 -0.86 0.32 -0.33
29 AT2G43630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67
Blast hits to 67 proteins in 20 species: Archae - 0;
Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses
- 2; Other Eukaryotes - 2 (source: NCBI BLink).		 0.86 0.33 -0.32
30 AT5G24020 septum site-determining protein (MIND) ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 11, ATMIND1, MIND		 0.85 0.32 -0.32
31 AT1G60230 Radical SAM superfamily protein 0.85 0.31 -0.34
32 AT3G07430 YGGT family protein ATYLMG1-1, embryo defective 1990,
YLMG1-1		 0.84 0.32 -0.3
33 AT5G04430 binding to TOMV RNA 1L (long form) BINDING TO TOMV RNA 1, binding to
TOMV RNA 1L (long form), BINDING
TO TOMV RNA 1S (SHORT FORM)		 0.84 0.32 -0.29
34 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.84 0.3 -0.29
35 AT5G51460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 ATTPPA 0.84 0.31 -0.32
36 AT3G62120 Class II aaRS and biotin synthetases superfamily protein 0.84 0.32 -0.34
37 AT1G69740 Aldolase superfamily protein HEMB1 0.84 0.33 -0.32
38 AT2G25840 Nucleotidylyl transferase superfamily protein ovule abortion 4 0.84 0.31 -0.31
39 AT2G10940 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.84 0.31 -0.32
40 AT3G13740 Ribonuclease III family protein 0.84 0.31 -0.32
41 AT1G10522 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 24 Blast hits to 24 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.83 0.3 -0.3
42 AT2G42770 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.83 0.33 -0.33
43 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.83 0.33 -0.3
44 AT3G11510 Ribosomal protein S11 family protein 0.83 0.3 -0.32
45 AT4G28210 embryo defective 1923 embryo defective 1923 0.83 0.31 -0.3
46 AT5G48630 Cyclin family protein 0.83 0.31 -0.32
47 AT4G09730 RH39 RH39 0.83 0.3 -0.31
48 AT3G63190 ribosome recycling factor, chloroplast precursor Arabidopsis thaliana chloroplast
ribosome recycling factor,
chloroplast ribosome recycling
factor, HIGH CHLOROPHYLL
FLUORESCENCE AND PALE GREEN MUTANT
108, ribosome recycling factor,
chloroplast precursor		 0.83 0.31 -0.32
49 AT3G23710 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-III,
translocon at the inner envelope
membrane of chloroplasts 22-III		 0.83 0.32 -0.33
50 AT1G08640 Chloroplast J-like domain 1 Chloroplast J-like domain 1 0.83 0.31 -0.31
51 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.83 0.34 -0.31
52 AT1G80640 Protein kinase superfamily protein 0.82 0.33 -0.31
53 AT1G52670 Single hybrid motif superfamily protein 0.82 0.3 -0.31
54 AT2G24020 Uncharacterised BCR, YbaB family COG0718 0.82 0.3 -0.34
55 AT2G25870 haloacid dehalogenase-like hydrolase family protein 0.82 0.31 -0.32
56 AT4G32915 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of translational fidelity; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Glu-tRNAGln amidotransferase, C subunit
(InterPro:IPR003837); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.82 0.31 -0.31
57 AT1G53120 RNA-binding S4 domain-containing protein 0.82 0.32 -0.32
58 AT5G24650 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.82 0.32 -0.34
59 AT2G22230 Thioesterase superfamily protein 0.82 0.29 -0.31
60 AT2G43710 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 FATTY ACID BIOSYNTHESIS 2,
suppressor of SA insensitive 2		 0.82 0.31 -0.31
61 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 0.82 0.32 -0.32
62 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.82 0.3 -0.31
63 AT1G16790 ribosomal protein-related 0.82 0.31 -0.32
64 AT4G32900 Peptidyl-tRNA hydrolase II (PTH2) family protein 0.82 0.31 -0.31
65 AT1G54100 aldehyde dehydrogenase 7B4 aldehyde dehydrogenase 7B4 -0.8 0.32 -0.32
66 AT3G11420 Protein of unknown function (DUF604) -0.8 0.32 -0.32
67 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 -0.78 0.32 -0.34
68 AT5G39520 Protein of unknown function (DUF1997) -0.77 0.31 -0.32
69 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.75 0.29 -0.31
70 AT1G71080 RNA polymerase II transcription elongation factor -0.75 0.3 -0.33
71 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 -0.75 0.32 -0.34
72 AT5G18780 F-box/RNI-like superfamily protein -0.75 0.3 -0.31
73 AT4G02280 sucrose synthase 3 ATSUS3, sucrose synthase 3 -0.74 0.31 -0.31
74 AT2G30360 SOS3-interacting protein 4 CBL-INTERACTING PROTEIN KINASE 11,
PROTEIN KINASE SOS2-LIKE 5,
SOS3-interacting protein 4,
SNF1-RELATED PROTEIN KINASE 3.22		 -0.74 0.32 -0.29
75 AT5G28510 beta glucosidase 24 beta glucosidase 24 -0.74 0.29 -0.33
76 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.74 0.33 -0.33
77 AT3G29575 ABI five binding protein 3 ABI five binding protein 3 -0.73 0.3 -0.32
78 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 -0.72 0.33 -0.31
79 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.72 0.31 -0.3
80 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 -0.71 0.29 -0.33
81 AT5G67340 ARM repeat superfamily protein -0.71 0.32 -0.33
82 AT5G01990 Auxin efflux carrier family protein -0.71 0.32 -0.31
83 AT5G59310 lipid transfer protein 4 lipid transfer protein 4 -0.71 0.3 -0.31
84 AT2G18050 histone H1-3 histone H1-3 -0.71 0.31 -0.31
85 AT2G22660 Protein of unknown function (duplicated DUF1399) -0.71 0.32 -0.31
86 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 -0.7 0.32 -0.31
87 AT1G05340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 7 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast
hits to 189 proteins in 27 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.31
88 AT1G78780 pathogenesis-related family protein -0.69 0.32 -0.31
89 AT2G22970 serine carboxypeptidase-like 11 serine carboxypeptidase-like 11 -0.69 0.31 -0.32
90 AT4G34860 Plant neutral invertase family protein alkaline/neutral invertase B -0.68 0.31 -0.32
91 AT1G23120 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.67 0.32 -0.3
92 AT3G48510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G63350.1); Has 98 Blast hits
to 98 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.3 -0.32
93 AT2G47810 nuclear factor Y, subunit B5 nuclear factor Y, subunit B5 -0.67 0.34 -0.33
94 AT5G54300 Protein of unknown function (DUF761) -0.67 0.3 -0.33