AGICode | AT3G59990 |
Description | methionine aminopeptidase 2B |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G59990 | methionine aminopeptidase 2B | methionine aminopeptidase 2B | 1 | 0.32 | -0.36 | ||
2 | AT3G19980 | flower-specific, phytochrome-associated protein phosphatase 3 |
flower-specific, phytochrome-associated protein phosphatase 3, EMBRYO DEFECTIVE 2736, flower-specific, phytochrome-associated protein phosphatase 3, SERINE/THREONINE PROTEIN PHOSPHATASE |
0.82 | 0.34 | -0.31 | ||
3 | AT4G26430 | COP9 signalosome subunit 6B | COP9 signalosome subunit 6B | 0.8 | 0.32 | -0.29 | ||
4 | AT1G19370 | unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.77 | 0.31 | -0.32 | |||
5 | AT5G58020 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). |
0.76 | 0.31 | -0.3 | |||
6 | AT5G20570 | RING-box 1 | RING-BOX 1, HRT1, RING-box 1, REGULATOR OF CULLINS-1 |
0.76 | 0.29 | -0.3 | ||
7 | AT3G19630 | Radical SAM superfamily protein | 0.75 | 0.32 | -0.33 | |||
8 | AT2G30260 | U2 small nuclear ribonucleoprotein B | U2 small nuclear ribonucleoprotein B |
0.75 | 0.33 | -0.3 | ||
9 | AT4G12590 | Protein of unknown function DUF106, transmembrane | 0.75 | 0.33 | -0.3 | |||
10 | AT4G03120 | C2H2 and C2HC zinc fingers superfamily protein | 0.75 | 0.31 | -0.34 | |||
11 | AT2G47970 | Nuclear pore localisation protein NPL4 | 0.75 | 0.33 | -0.31 | |||
12 | AT5G14240 | Thioredoxin superfamily protein | 0.74 | 0.32 | -0.3 | |||
13 | AT2G26990 | proteasome family protein | ATCSN2, CONSTITUTIVE PHOTOMORPHOGENIC 12, CSN2, FUSCA 12 |
0.74 | 0.33 | -0.31 | ||
14 | AT1G07420 | sterol 4-alpha-methyl-oxidase 2-1 | Arabidopsis thaliana sterol 4-alpha-methyl oxidase 1, sterol 4-alpha-methyl-oxidase 2-1 |
0.73 | 0.32 | -0.32 | ||
15 | AT4G17060 | FRIGIDA interacting protein 2 | FRIGIDA interacting protein 2 | 0.73 | 0.28 | -0.31 | ||
16 | AT4G23040 | Ubiquitin-like superfamily protein | 0.73 | 0.29 | -0.32 | |||
17 | AT3G47670 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.73 | 0.31 | -0.31 | |||
18 | AT4G28540 | casein kinase I-like 6 | casein kinase I-like 6, PAPK1 | 0.73 | 0.32 | -0.34 | ||
19 | AT5G13780 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.72 | 0.33 | -0.31 | |||
20 | AT5G66140 | proteasome alpha subunit D2 | proteasome alpha subunit D2 | 0.72 | 0.31 | -0.33 | ||
21 | AT4G34450 | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative |
0.72 | 0.33 | -0.3 | |||
22 | AT5G06410 | DNAJ heat shock N-terminal domain-containing protein | 0.72 | 0.34 | -0.31 | |||
23 | AT4G21110 | G10 family protein | 0.72 | 0.3 | -0.34 | |||
24 | AT4G17510 | ubiquitin C-terminal hydrolase 3 | ubiquitin C-terminal hydrolase 3 | 0.71 | 0.32 | -0.34 | ||
25 | AT2G14835 | RING/U-box superfamily protein | 0.71 | 0.31 | -0.3 | |||
26 | AT5G20880 | transposable element gene | 0.71 | 0.31 | -0.33 | |||
27 | AT3G51100 | unknown protein; Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.71 | 0.29 | -0.31 | |||
28 | AT1G09150 | pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein |
0.71 | 0.33 | -0.31 | |||
29 | AT3G03950 | evolutionarily conserved C-terminal region 1 | evolutionarily conserved C-terminal region 1 |
0.71 | 0.32 | -0.3 | ||
30 | AT5G51130 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.71 | 0.32 | -0.3 | |||
31 | AT4G31080 | Protein of unknown function (DUF2296) | 0.7 | 0.32 | -0.31 | |||
32 | AT4G08420 | transposable element gene | 0.7 | 0.34 | -0.33 | |||
33 | AT4G02570 | cullin 1 | cullin 1, AUXIN RESISTANT 6, cullin 1 |
0.7 | 0.31 | -0.32 | ||
34 | AT1G71780 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.7 | 0.31 | -0.32 | |||
35 | AT2G10970 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.7 | 0.33 | -0.32 | |||
36 | AT2G37500 | arginine biosynthesis protein ArgJ family | 0.7 | 0.31 | -0.32 | |||
37 | AT4G14230 | CBS domain-containing protein with a domain of unknown function (DUF21) |
0.7 | 0.32 | -0.32 | |||
38 | AT4G38890 | FMN-linked oxidoreductases superfamily protein | 0.7 | 0.31 | -0.31 | |||
39 | AT1G12280 | LRR and NB-ARC domains-containing disease resistance protein |
-0.7 | 0.31 | -0.3 | |||
40 | AT5G58240 | FRAGILE HISTIDINE TRIAD | FRAGILE HISTIDINE TRIAD | 0.69 | 0.29 | -0.31 | ||
41 | AT1G01230 | ORMDL family protein | 0.69 | 0.31 | -0.28 | |||
42 | AT5G37780 | calmodulin 1 | ACAM-1, calmodulin 1, TOUCH 1 | 0.69 | 0.33 | -0.32 | ||
43 | AT1G65270 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 149 Blast hits to 149 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.69 | 0.31 | -0.32 | |||
44 | AT3G18940 | clast3-related | 0.69 | 0.29 | -0.31 | |||
45 | AT5G49410 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.69 | 0.32 | -0.31 | |||
46 | AT3G12570 | FYD | FYD | 0.69 | 0.3 | -0.29 | ||
47 | AT3G20800 | Cell differentiation, Rcd1-like protein | 0.69 | 0.31 | -0.32 | |||
48 | AT5G62880 | RAC-like 10 | RAC-like 10, ARABIDOPSIS THALIANA RAC-LIKE 10, RHO-RELATED PROTEIN FROM PLANTS 11, RAC-like 10, RHO-related protein from plants 11 |
0.69 | 0.3 | -0.32 | ||
49 | AT5G24400 | NagB/RpiA/CoA transferase-like superfamily protein | EMBRYO DEFECTIVE 2024, 6-PHOSPHOGLUCONOLACTONASE 3 |
0.69 | 0.33 | -0.32 | ||
50 | AT5G63120 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.69 | 0.31 | -0.31 | |||
51 | AT3G07640 | unknown protein; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.3 | -0.31 | |||
52 | AT2G44610 | Ras-related small GTP-binding family protein | ATRAB6A, ATRABH1B, RAB6, RAB6A | 0.69 | 0.3 | -0.33 | ||
53 | AT1G30480 | D111/G-patch domain-containing protein | DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 |
0.69 | 0.31 | -0.31 | ||
54 | AT2G03820 | nonsense-mediated mRNA decay NMD3 family protein | 0.69 | 0.33 | -0.29 | |||
55 | AT2G23070 | Protein kinase superfamily protein | 0.68 | 0.31 | -0.34 | |||
56 | AT3G16760 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.68 | 0.33 | -0.29 | |||
57 | AT5G38480 | general regulatory factor 3 | general regulatory factor 3, RCI1 | 0.68 | 0.32 | -0.32 | ||
58 | AT5G19680 | Leucine-rich repeat (LRR) family protein | 0.68 | 0.36 | -0.34 | |||
59 | AT3G29200 | chorismate mutase 1 | ARABIDOPSIS THALIANA CHORISMATE MUTASE 1, chorismate mutase 1 |
0.68 | 0.32 | -0.33 | ||
60 | AT1G12650 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). |
0.68 | 0.31 | -0.31 | |||
61 | AT3G02420 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0121 (InterPro:IPR005344); Has 72 Blast hits to 71 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.67 | 0.33 | -0.33 | |||
62 | AT3G20970 | NFU domain protein 4 | ARABIDOPSIS THALIANA NFU DOMAIN PROTEIN 2, NFU domain protein 4 |
0.67 | 0.31 | -0.32 | ||
63 | AT5G14530 | Transducin/WD40 repeat-like superfamily protein | 0.67 | 0.3 | -0.31 | |||
64 | AT2G23080 | Protein kinase superfamily protein | casein kinase II, alpha chain 3 | 0.67 | 0.3 | -0.31 | ||
65 | AT5G53920 | ribosomal protein L11 methyltransferase-related | 0.66 | 0.33 | -0.33 | |||
66 | AT5G49400 | zinc knuckle (CCHC-type) family protein | 0.66 | 0.31 | -0.3 | |||
67 | AT5G62400 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.66 | 0.31 | -0.31 | |||
68 | AT1G71210 | Pentatricopeptide repeat (PPR) superfamily protein | 0.66 | 0.32 | -0.33 | |||
69 | AT5G53000 | 2A phosphatase associated protein of 46 kD | 2A phosphatase associated protein of 46 kD |
0.66 | 0.33 | -0.3 | ||
70 | AT5G06830 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF773 (InterPro:IPR008491); Has 365 Blast hits to 359 proteins in 109 species: Archae - 9; Bacteria - 13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). |
0.66 | 0.31 | -0.31 | |||
71 | AT1G22970 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.65 | 0.31 | -0.33 | |||
72 | AT4G01390 | TRAF-like family protein | -0.65 | 0.32 | -0.34 | |||
73 | AT3G11200 | alfin-like 2 | alfin-like 2 | 0.65 | 0.33 | -0.32 | ||
74 | AT5G09390 | CD2-binding protein-related | 0.65 | 0.31 | -0.33 | |||
75 | AT2G29700 | pleckstrin homologue 1 | pleckstrin homologue 1, pleckstrin homologue 1 |
0.65 | 0.3 | -0.32 | ||
76 | AT2G27375 | transposable element gene | -0.65 | 0.33 | -0.32 | |||
77 | AT5G57080 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.31 | -0.31 | |||
78 | AT1G22540 | Major facilitator superfamily protein | -0.64 | 0.31 | -0.3 | |||
79 | AT5G51290 | Diacylglycerol kinase family protein | -0.63 | 0.32 | -0.3 | |||
80 | AT5G41850 | alpha/beta-Hydrolases superfamily protein | -0.63 | 0.32 | -0.33 | |||
81 | AT4G31330 | Protein of unknown function, DUF599 | -0.63 | 0.3 | -0.32 | |||
82 | AT2G17260 | glutamate receptor 2 | ATGLR2, ATGLR3.1, glutamate receptor 2, GLR3.1 |
-0.62 | 0.31 | -0.33 | ||
83 | AT3G27540 | beta-1,4-N-acetylglucosaminyltransferase family protein | -0.62 | 0.33 | -0.31 | |||
84 | AT3G57920 | squamosa promoter binding protein-like 15 | squamosa promoter binding protein-like 15 |
-0.61 | 0.31 | -0.32 | ||
85 | AT2G46730 | pseudogene, similar to 68 kDa protein, blastp match of 68% identity and 4.7e-17 P-value to GP|7271113|emb|CAB81547.1||AJ276420 68 kDa protein {Cicer arietinum} |
-0.61 | 0.32 | -0.29 | |||
86 | AT4G04980 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink). |
-0.6 | 0.31 | -0.34 | |||
87 | AT3G02500 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.33 | -0.31 | |||
88 | AT5G44270 | TPX2 (targeting protein for Xklp2) protein family | -0.6 | 0.32 | -0.31 | |||
89 | AT2G22390 | pseudogene, putative GTP-binding protein, similar to GTP-binding protein GI:303738 from (Pisum sativum); blastp match of 75% identity and 3.6e-56 P-value to GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum sativum} |
ATRABA4E, RAB GTPase homolog A4E | -0.6 | 0.31 | -0.31 | ||
90 | AT3G26160 | cytochrome P450, family 71, subfamily B, polypeptide 17 | cytochrome P450, family 71, subfamily B, polypeptide 17 |
-0.6 | 0.32 | -0.31 | ||
91 | AT1G74440 | Protein of unknown function (DUF962) | -0.6 | 0.31 | -0.31 | |||
92 | AT1G24000 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.59 | 0.31 | -0.31 | |||
93 | AT4G27300 | S-locus lectin protein kinase family protein | -0.59 | 0.33 | -0.3 | |||
94 | AT4G30050 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.3 | -0.31 | |||
95 | AT3G28120 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
-0.59 | 0.31 | -0.31 | |||
96 | AT1G35860 | translocon outer membrane complex 75-I | translocon outer membrane complex 75-I |
-0.58 | 0.31 | -0.31 | ||
97 | AT4G24250 | Seven transmembrane MLO family protein | MILDEW RESISTANCE LOCUS O 13, MILDEW RESISTANCE LOCUS O 13 |
-0.58 | 0.33 | -0.32 | ||
98 | AT4G35550 | WUSCHEL related homeobox 13 | ATWOX13, HB-4, WUSCHEL related homeobox 13 |
-0.58 | 0.31 | -0.31 | ||
99 | AT5G35670 | IQ-domain 33 | IQ-domain 33 | -0.58 | 0.32 | -0.31 | ||
100 | AT2G17960 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.32 | -0.3 | |||
101 | AT1G41900 | transposable element gene | -0.58 | 0.33 | -0.31 | |||
102 | AT2G31160 | Protein of unknown function (DUF640) | LIGHT SENSITIVE HYPOCOTYLS 3, ORGAN BOUNDARY 1 |
-0.57 | 0.3 | -0.3 | ||
103 | AT4G19910 | Toll-Interleukin-Resistance (TIR) domain family protein | -0.57 | 0.32 | -0.32 | |||
104 | AT3G56440 | homolog of yeast autophagy 18 (ATG18) D | homolog of yeast autophagy 18 (ATG18) D, homolog of yeast autophagy 18 (ATG18) D |
-0.57 | 0.32 | -0.31 | ||
105 | AT5G23800 | DOMAIN OF UNKNOWN FUNCTION 724 10 | DOMAIN OF UNKNOWN FUNCTION 724 10, DOMAIN OF UNKNOWN FUNCTION 724 10 |
-0.57 | 0.31 | -0.32 | ||
106 | AT4G34400 | AP2/B3-like transcriptional factor family protein | -0.57 | 0.32 | -0.31 | |||
107 | AT4G13985 | FBD-associated F-box protein | FBD-associated F-box protein | -0.56 | 0.3 | -0.29 | ||
108 | AT4G18090 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.56 | 0.34 | -0.31 | |||
109 | AT5G37960 | GroES-like family protein | -0.56 | 0.3 | -0.33 | |||
110 | AT5G59800 | methyl-CPG-binding domain 7 | ARABIDOPSIS THALIANA METHYL-CPG-BINDING DOMAIN 7, methyl-CPG-binding domain 7 |
-0.56 | 0.31 | -0.31 | ||
111 | AT1G34530 | transposable element gene | -0.55 | 0.33 | -0.33 | |||
112 | AT3G48640 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66670.2); Has 42 Blast hits to 42 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.34 | |||
113 | AT2G17470 | Aluminium activated malate transporter family protein | ALuminium activated Malate Transporter 6, AtALMT6 |
-0.55 | 0.34 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
114 | C0136 | Lactic acid | D,L-Lactic acid | Lactate | pyruvate fermentation to lactate | 0.71 | 0.42 | -0.47 |