AT3G59810 : -
Query Information
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AGICode AT3G59810
Description Small nuclear ribonucleoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G59810 Small nuclear ribonucleoprotein family protein 1 0.32 -0.33
2 AT3G25140 Nucleotide-diphospho-sugar transferases superfamily protein GALACTURONOSYLTRANSFERASE 8,
QUASIMODO 1		 0.8 0.31 -0.32
3 AT2G16600 rotamase CYP 3 rotamase CYP 3 0.78 0.33 -0.32
4 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 -0.77 0.32 -0.31
5 AT1G72340 NagB/RpiA/CoA transferase-like superfamily protein 0.77 0.29 -0.3
6 AT2G30620 winged-helix DNA-binding transcription factor family
protein		 0.75 0.32 -0.33
7 AT3G18380 sequence-specific DNA binding transcription
factors;sequence-specific DNA binding		 SAWADEE homeodomain homolog 2 0.74 0.3 -0.31
8 AT3G44780 Cysteine proteinases superfamily protein 0.73 0.31 -0.33
9 AT3G16570 rapid alkalinization factor 23 ARABIDOPSIS RAPID ALKALINIZATION
FACTOR 23, rapid alkalinization
factor 23		 0.73 0.31 -0.32
10 AT4G17430 O-fucosyltransferase family protein 0.72 0.31 -0.31
11 AT1G35620 PDI-like 5-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 8, PDI-like
5-2, PROTEIN DISULFIDE ISOMERASE
8, PDI-like 5-2		 0.72 0.31 -0.33
12 AT2G24970 unknown protein; Has 33 Blast hits to 33 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.72 0.32 -0.31
13 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.31 -0.33
14 AT5G14920 Gibberellin-regulated family protein 0.71 0.33 -0.31
15 AT3G51400 Arabidopsis protein of unknown function (DUF241) 0.71 0.3 -0.29
16 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein -0.71 0.32 -0.34
17 AT4G24440 transcription initiation factor IIA gamma chain /
TFIIA-gamma (TFIIA-S)		 0.71 0.3 -0.32
18 AT3G57340 Heat shock protein DnaJ, N-terminal with domain of unknown
function (DUF1977)		 0.71 0.31 -0.34
19 AT2G17230 EXORDIUM like 5 EXORDIUM like 5 0.7 0.33 -0.31
20 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.32 -0.32
21 AT1G77850 auxin response factor 17 auxin response factor 17 0.7 0.32 -0.32
22 AT3G19760 eukaryotic initiation factor 4A-III eukaryotic initiation factor
4A-III		 0.7 0.32 -0.31
23 AT2G43260 F-box and associated interaction domains-containing protein 0.69 0.33 -0.33
24 AT5G44210 erf domain protein 9 ERF DOMAIN PROTEIN- 9, ERF DOMAIN
PROTEIN 9, erf domain protein 9		 0.69 0.31 -0.32
25 AT4G05150 Octicosapeptide/Phox/Bem1p family protein 0.69 0.32 -0.32
26 AT2G30590 WRKY DNA-binding protein 21 WRKY DNA-binding protein 21 0.69 0.3 -0.32
27 AT3G26330 cytochrome P450, family 71, subfamily B, polypeptide 37 cytochrome P450, family 71,
subfamily B, polypeptide 37		 -0.69 0.3 -0.3
28 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein 0.69 0.31 -0.31
29 AT1G49560 Homeodomain-like superfamily protein 0.68 0.31 -0.32
30 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 0.68 0.3 -0.31
31 AT5G22310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.68 0.32 -0.3
32 AT4G33720 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.68 0.31 -0.31
33 AT2G21000 transposable element gene 0.68 0.32 -0.31
34 AT2G40780 Nucleic acid-binding, OB-fold-like protein 0.68 0.31 -0.3
35 AT5G15020 SIN3-like 2 SIN3-like 2 -0.68 0.32 -0.28
36 AT1G10370 Glutathione S-transferase family protein GLUTATHIONE S-TRANSFERASE TAU 17,
EARLY-RESPONSIVE TO DEHYDRATION 9,
GLUTATHIONE S-TRANSFERASE 30,
GLUTATHIONE S-TRANSFERASE 30B,
GLUTATHIONE S-TRANSFERASE U17		 0.67 0.32 -0.32
37 AT2G36670 Eukaryotic aspartyl protease family protein -0.67 0.33 -0.32
38 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.67 0.29 -0.31
39 AT2G15440 Protein of unknown function (DUF579) -0.67 0.29 -0.3
40 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.67 0.3 -0.31
41 AT1G32040 transposable element gene 0.66 0.32 -0.31
42 AT2G10620 transposable element gene 0.66 0.32 -0.31
43 AT5G49945 Protein of unknown function (DUF1682) 0.66 0.3 -0.31
44 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein 0.66 0.3 -0.33
45 AT1G14720 xyloglucan endotransglucosylase/hydrolase 28 ATXTH28, ENDOXYLOGLUCAN
TRANSFERASE A2, xyloglucan
endotransglucosylase/hydrolase 28,
xyloglucan endotransglycosylase
related 2		 0.66 0.3 -0.31
46 AT1G04020 breast cancer associated RING 1 ATBARD1, breast cancer associated
RING 1, ROW1		 0.66 0.3 -0.31
47 AT1G31380 TRAF-like family protein 0.66 0.34 -0.34
48 AT5G02190 Eukaryotic aspartyl protease family protein ARABIDOPSIS THALIANA ASPARTIC
PROTEASE 38, EMBRYO DEFECTIVE 24,
PROMOTION OF CELL SURVIVAL 1		 0.66 0.3 -0.31
49 AT4G28320 Glycosyl hydrolase superfamily protein AtMAN5, endo-beta-mannase 5 0.66 0.32 -0.3
50 AT4G12920 Eukaryotic aspartyl protease family protein UNDEAD -0.65 0.3 -0.32
51 AT1G70720 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.65 0.32 -0.32
52 AT5G52050 MATE efflux family protein -0.65 0.31 -0.33
53 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.65 0.33 -0.32
54 AT4G34310 alpha/beta-Hydrolases superfamily protein -0.65 0.31 -0.33
55 AT1G31940 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.33 -0.3
56 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 -0.65 0.33 -0.31
57 AT1G62410 MIF4G domain-containing protein 0.65 0.33 -0.33
58 AT1G14820 Sec14p-like phosphatidylinositol transfer family protein 0.64 0.32 -0.31
59 AT5G58003 C-terminal domain phosphatase-like 4 C-terminal domain phosphatase-like
4		 0.64 0.3 -0.31
60 AT4G00190 pectin methylesterase 38 A. THALIANA PECTIN METHYLESTERASE
38, pectin methylesterase 38		 0.64 0.31 -0.32
61 AT3G01650 RING domain ligase1 RING domain ligase1 -0.64 0.31 -0.29
62 AT5G20460 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.64 0.3 -0.32
63 AT1G66220 Subtilase family protein 0.64 0.29 -0.28
64 AT5G43900 myosin 2 ARABIDOPSIS MYOSIN 2, myosin 2,
MYOSIN X1 2, MYOSIN XI-6		 -0.64 0.3 -0.3
65 AT4G08940 Ubiquitin carboxyl-terminal hydrolase family protein 0.64 0.32 -0.32
66 AT2G30650 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.64 0.34 -0.34
67 AT1G55190 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F2, PRA7 0.63 0.31 -0.32
68 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 -0.63 0.32 -0.3
69 AT3G04980 DNAJ heat shock N-terminal domain-containing protein 0.63 0.31 -0.31
70 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 0.63 0.33 -0.31
71 AT2G44490 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 26, PENETRATION 2 0.63 0.31 -0.32
72 AT1G75190 unknown protein; Has 7306 Blast hits to 3858 proteins in
279 species: Archae - 15; Bacteria - 134; Metazoa - 3314;
Fungi - 546; Plants - 228; Viruses - 207; Other Eukaryotes
- 2862 (source: NCBI BLink).		 0.63 0.32 -0.31
73 AT3G55030 phosphatidylglycerolphosphate synthase 2 phosphatidylglycerolphosphate
synthase 2		 0.63 0.31 -0.32
74 AT5G25360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.3 -0.32
75 AT5G09920 RNA polymerase II, Rpb4, core protein ATRPB15.9, NRPB4, RPB15.9,
RPB15.9.9		 0.63 0.31 -0.33
76 AT2G15720 transposable element gene -0.63 0.33 -0.29
77 AT1G64590 NAD(P)-binding Rossmann-fold superfamily protein -0.63 0.32 -0.3
78 AT2G12610 transposable element gene 0.62 0.3 -0.32
79 AT2G15240 UNC-50 family protein -0.62 0.31 -0.32
80 AT1G66960 Terpenoid cyclases family protein LUP5 -0.62 0.32 -0.31
81 AT1G77570 Winged helix-turn-helix transcription repressor DNA-binding 0.62 0.31 -0.31
82 AT1G05070 Protein of unknown function (DUF1068) 0.62 0.3 -0.31
83 AT1G14687 homeobox protein 32 homeobox protein 32, homeobox
protein 32, ZINC FINGER
HOMEODOMAIN 14		 0.62 0.33 -0.33
84 AT3G18910 EIN2 targeting protein2 EIN2 targeting protein2 0.62 0.32 -0.32
85 AT3G10330 Cyclin-like family protein 0.62 0.31 -0.32
86 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 -0.61 0.3 -0.32
87 AT1G03410 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 2A6 -0.61 0.3 -0.31
88 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.32 -0.32
89 AT4G37340 cytochrome P450, family 81, subfamily D, polypeptide 3 cytochrome P450, family 81,
subfamily D, polypeptide 3		 -0.61 0.32 -0.32
90 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.6 0.32 -0.32
91 AT5G04120 Phosphoglycerate mutase family protein -0.6 0.3 -0.31
92 AT5G37690 SGNH hydrolase-type esterase superfamily protein -0.6 0.31 -0.32
93 AT3G58810 metal tolerance protein A2 ARABIDOPSIS METAL TOLERANCE
PROTEIN 3, ATMTPA2, METAL
TOLERANCE PROTEIN 3, metal
tolerance protein A2		 -0.6 0.34 -0.32
94 AT5G46910 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 -0.6 0.31 -0.33
95 AT3G27670 ARM repeat superfamily protein RESURRECTION1 -0.59 0.31 -0.3
96 AT3G58280 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain		 -0.58 0.32 -0.32
97 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 -0.58 0.32 -0.31
98 AT1G72140 Major facilitator superfamily protein -0.58 0.34 -0.3
99 AT4G39770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
H		 -0.57 0.3 -0.29
100 AT1G75230 DNA glycosylase superfamily protein -0.57 0.33 -0.33
101 AT1G73950 Transmembrane Fragile-X-F-associated protein -0.57 0.31 -0.29
102 AT3G17510 CBL-interacting protein kinase 1 CBL-interacting protein kinase 1,
SNF1-RELATED PROTEIN KINASE 3.16		 -0.56 0.33 -0.3
103 AT1G75550 glycine-rich protein -0.56 0.31 -0.31
104 AT2G40470 LOB domain-containing protein 15 ASYMMETRIC LEAVES2-LIKE 11, LOB
domain-containing protein 15		 -0.55 0.3 -0.31
105 AT1G71530 Protein kinase superfamily protein -0.55 0.31 -0.34
106 AT5G63850 amino acid permease 4 amino acid permease 4 -0.55 0.3 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0174 MST_2370.2 - - - -0.74 0.47 -0.43
108 C0106 Glyceric acid D,L-Glyceric acid Glycerate photorespiration -0.66 0.32 -0.32 C0106
109 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		-0.64 0.31 -0.32 C0008
110 C0235 Sinapoyl malate Sinapoyl-(S)-malate Sinapoyl-(S)-malate sinapate ester biosynthesis -0.63 0.29 -0.31 C0235
111 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis -0.6 0.45 -0.44 C0240