AT3G60030 : squamosa promoter-binding protein-like 12
Query Information
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AGICode AT3G60030
Description squamosa promoter-binding protein-like 12
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G60030 squamosa promoter-binding protein-like 12 squamosa promoter-binding
protein-like 12		 1 0.31 -0.33
2 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.31 -0.31
3 AT5G14430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.7 0.32 -0.31
4 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE 0.67 0.32 -0.28
5 AT4G33210 F-box family protein SLOW MOTION 0.65 0.31 -0.32
6 AT5G13950 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits
to 145 proteins in 44 species: Archae - 0; Bacteria - 2;
Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.64 0.3 -0.32
7 ATCG00530 CemA-like proton extrusion protein-related YCF10 0.64 0.32 -0.32
8 AT1G30900 VACUOLAR SORTING RECEPTOR 6 binding protein of 80 kDa 3;3,
VACUOLAR SORTING RECEPTOR 3;3,
VACUOLAR SORTING RECEPTOR 6		 -0.64 0.31 -0.31
9 AT5G02220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.3 -0.33
10 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.3
11 AT4G30200 vernalization5/VIN3-like vernalization5/VIN3-like 1,
VIN3-Like 2		 0.63 0.3 -0.32
12 AT1G05300 zinc transporter 5 precursor zinc transporter 5 precursor -0.63 0.32 -0.33
13 AT1G68490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast
hits to 125 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.31
14 AT5G63760 RING/U-box superfamily protein ARIADNE 15, ARABIDOPSIS ARIADNE 15 -0.63 0.32 -0.31
15 AT4G28260 unknown protein; Has 50 Blast hits to 42 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.32 -0.33
16 AT1G51850 Leucine-rich repeat protein kinase family protein -0.62 0.31 -0.31
17 AT1G04400 cryptochrome 2 AT-PHH1, ATCRY2, cryptochrome 2,
FHA, PHH1		 0.62 0.32 -0.33
18 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1		 -0.62 0.3 -0.32
19 AT2G34740 Protein phosphatase 2C family protein 0.62 0.31 -0.29
20 AT3G63000 NPL4-like protein 1 NPL4-like protein 1 0.61 0.29 -0.34
21 AT1G13950 eukaryotic elongation factor 5A-1 EUKARYOTIC ELONGATION FACTOR 5A-1,
EIF-5A, EUKARYOTIC ELONGATION
FACTOR 5A, eukaryotic elongation
factor 5A-1		 -0.61 0.3 -0.31
22 AT4G11860 Protein of unknown function (DUF544) 0.61 0.3 -0.32
23 AT3G46280 protein kinase-related -0.6 0.33 -0.33
24 AT5G67440 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 2, NAKED PINS
IN YUC MUTANTS 3		 0.6 0.34 -0.33
25 AT1G49850 RING/U-box superfamily protein 0.6 0.31 -0.32
26 AT3G58790 galacturonosyltransferase 15 galacturonosyltransferase 15 0.6 0.32 -0.29
27 AT1G22500 RING/U-box superfamily protein Arabidopsis thaliana Arabidopsis
toxicos en levadura 15,
Arabidopsis toxicos en levadura 15		 -0.6 0.32 -0.31
28 ATCG00510 photsystem I subunit I photsystem I subunit I 0.6 0.33 -0.31
29 AT3G58640 Mitogen activated protein kinase kinase kinase-related 0.6 0.33 -0.31
30 AT5G48060 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.59 0.33 -0.32
31 AT1G13740 ABI five binding protein 2 ABI five binding protein 2 0.59 0.31 -0.31
32 AT2G26240 Transmembrane proteins 14C -0.59 0.31 -0.33
33 AT4G00955 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana
protein match is: Protein kinase superfamily protein
(TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.31 -0.29
34 AT3G01670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits
to 111 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 sieve element occlusion a 0.59 0.32 -0.31
35 AT5G12980 Cell differentiation, Rcd1-like protein -0.59 0.31 -0.3
36 AT1G72410 COP1-interacting protein-related 0.58 0.32 -0.32
37 AT2G31110 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 40 -0.58 0.29 -0.31
38 AT5G55170 small ubiquitin-like modifier 3 ATSUMO3, SMALL UBIQUITIN-LIKE
MODIFIER 3, SMALL UBIQUITIN-LIKE
MODIFIER 3, small ubiquitin-like
modifier 3		 -0.58 0.32 -0.31
39 AT5G03270 lysine decarboxylase family protein LONELY GUY 6 0.58 0.31 -0.31
40 AT4G18450 Integrase-type DNA-binding superfamily protein -0.57 0.33 -0.32
41 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.57 0.32 -0.31
42 AT3G27530 golgin candidate 6 golgin candidate 6, MAIGO 4 0.57 0.3 -0.31
43 AT1G19510 RAD-like 5 RAD-like 5, RAD-like 5,
RADIALIS-LIKE SANT/MYB 4		 0.57 0.3 -0.31
44 AT5G42440 Protein kinase superfamily protein -0.57 0.35 -0.32
45 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 -0.57 0.3 -0.32
46 AT3G42880 Leucine-rich repeat protein kinase family protein 0.57 0.28 -0.31
47 AT2G40790 C-terminal cysteine residue is changed to a serine 2 C-terminal cysteine residue is
changed to a serine 2, C-terminal
cysteine residue is changed to a
serine 2		 -0.56 0.33 -0.31
48 AT3G58620 tetratricopetide-repeat thioredoxin-like 4 tetratricopetide-repeat
thioredoxin-like 4		 -0.56 0.34 -0.33
49 AT3G24510 Defensin-like (DEFL) family protein 0.56 0.33 -0.32
50 AT3G50480 homolog of RPW8 4 homolog of RPW8 4 -0.56 0.32 -0.33
51 AT3G45730 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.29
52 AT5G44910 Toll-Interleukin-Resistance (TIR) domain family protein -0.56 0.31 -0.32
53 AT5G46910 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 0.56 0.32 -0.31
54 AT1G66140 zinc finger protein 4 zinc finger protein 4 0.56 0.3 -0.33
55 AT3G04110 glutamate receptor 1.1 ATGLR1.1, GLUTAMATE RECEPTOR 1,
glutamate receptor 1.1		 -0.56 0.31 -0.31
56 AT2G28270 Cysteine/Histidine-rich C1 domain family protein 0.55 0.32 -0.32
57 AT4G35240 Protein of unknown function (DUF630 and DUF632) 0.55 0.29 -0.33
58 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 -0.55 0.33 -0.33
59 AT5G59000 RING/FYVE/PHD zinc finger superfamily protein 0.55 0.32 -0.34
60 AT2G04240 RING/U-box superfamily protein XERICO 0.55 0.31 -0.33
61 AT1G70140 formin 8 formin 8, formin 8 -0.55 0.32 -0.3
62 AT3G19500 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.55 0.3 -0.32
63 AT1G63980 D111/G-patch domain-containing protein 0.55 0.3 -0.32
64 AT1G08210 Eukaryotic aspartyl protease family protein 0.55 0.32 -0.33
65 AT1G75750 GAST1 protein homolog 1 GAST1 protein homolog 1 -0.54 0.3 -0.33
66 AT1G77500 Protein of unknown function (DUF630 and DUF632) 0.54 0.31 -0.32
67 AT4G38560 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.54 0.32 -0.3
68 AT1G08450 calreticulin 3 A. thaliana calreticulin 3,
calreticulin 3, EMS-MUTAGENIZED
BRI1 SUPPRESSOR 2, PRIORITY IN
SWEET LIFE 1		 -0.54 0.31 -0.31
69 AT5G11410 Protein kinase superfamily protein -0.54 0.33 -0.32
70 AT1G19250 flavin-dependent monooxygenase 1 flavin-dependent monooxygenase 1 -0.54 0.3 -0.32
71 AT5G50200 nitrate transmembrane transporters ATNRT3.1, NITRATE TRANSPORTER 3.1,
WOUND-RESPONSIVE 3		 -0.53 0.32 -0.29
72 AT3G18300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits
to 69 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.53 0.3 -0.31
73 AT2G37590 DNA binding with one finger 2.4 ATDOF2.4, DNA binding with one
finger 2.4		 0.53 0.33 -0.33
74 AT5G58590 RAN binding protein 1 RAN binding protein 1 -0.53 0.33 -0.33
75 AT3G49370 Calcium-dependent protein kinase (CDPK) family protein -0.53 0.32 -0.31
76 AT4G02440 F-box family protein EMPFINDLICHER IM DUNKELROTEN LICHT
1		 0.53 0.31 -0.31
77 AT1G19610 Arabidopsis defensin-like protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
78, PDF1.4		 -0.53 0.3 -0.32
78 AT1G53380 Plant protein of unknown function (DUF641) 0.53 0.3 -0.31
79 AT4G27060 ARM repeat superfamily protein CONVOLUTA, SPIRAL 2, TORTIFOLIA 1 0.53 0.31 -0.33
80 AT2G05590 TLD-domain containing nucleolar protein 0.52 0.34 -0.32
81 AT3G49520 F-box and associated interaction domains-containing protein -0.52 0.31 -0.32
82 AT4G40020 Myosin heavy chain-related protein -0.52 0.32 -0.34
83 AT1G76185 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G20460.1); Has 37 Blast hits
to 37 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.52 0.32 -0.3
84 AT5G12170 CRT (chloroquine-resistance transporter)-like transporter 3 CRT (chloroquine-resistance
transporter)-like transporter 3		 -0.52 0.32 -0.3
85 AT5G39020 Malectin/receptor-like protein kinase family protein -0.52 0.33 -0.32
86 AT1G36060 Integrase-type DNA-binding superfamily protein -0.52 0.32 -0.3
87 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 -0.52 0.32 -0.3
88 AT1G76860 Small nuclear ribonucleoprotein family protein -0.52 0.3 -0.3
89 AT3G47480 Calcium-binding EF-hand family protein -0.52 0.32 -0.33
90 AT3G22930 calmodulin-like 11 calmodulin-like 11 -0.51 0.31 -0.33
91 AT5G53030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF688 (InterPro:IPR007789); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.51 0.32 -0.32
92 AT1G21240 wall associated kinase 3 wall associated kinase 3 -0.51 0.31 -0.32
93 AT3G60070 Major facilitator superfamily protein 0.51 0.29 -0.32
94 AT4G37230 Photosystem II manganese-stabilising protein (PsbO) family 0.51 0.32 -0.3
95 AT5G06720 peroxidase 2 peroxidase 2, peroxidase 2 -0.51 0.31 -0.31
96 AT1G07390 receptor like protein 1 receptor like protein 1, receptor
like protein 1		 -0.51 0.32 -0.31
97 AT4G00240 phospholipase D beta 2 phospholipase D beta 2 -0.5 0.32 -0.32
98 AT3G28580 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.49 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
99 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.88 0.49 -0.44 C0003
100 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		0.8 0.45 -0.45 C0010
101 C0176 MST_2406.9 - - - 0.73 0.44 -0.44
102 C0180 MST_2539.9 - - - 0.7 0.48 -0.46
103 C0089 Fortunellin - - - 0.63 0.44 -0.43
104 C0229 Robinin - - flavone biosynthesis 0.62 0.45 -0.42
105 C0062 Betain - - - 0.56 0.33 -0.28
106 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - 0.54 0.43 -0.44
107 C0002 α-Lipoic acid (+/-)-α-Lipoic acid Lipoate cofactor of fatty acid biosynthesis 0.53 0.44 -0.43 C0002
108 C0222 Quercetin-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Quercetin-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - 0.52 0.32 -0.34