AT3G59650 : -
Query Information
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AGICode AT3G59650
Description mitochondrial ribosomal protein L51/S25/CI-B8 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 1 0.34 -0.32
2 AT1G04480 Ribosomal protein L14p/L23e family protein 0.92 0.29 -0.33
3 AT5G47700 60S acidic ribosomal protein family 0.91 0.34 -0.33
4 AT3G09200 Ribosomal protein L10 family protein 0.9 0.32 -0.31
5 AT3G53020 Ribosomal protein L24e family protein RIBOSOMAL PROTEIN L24, RPL24B,
SHORT VALVE1		 0.9 0.3 -0.28
6 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.9 0.31 -0.28
7 AT2G27720 60S acidic ribosomal protein family 0.89 0.32 -0.32
8 AT3G47370 Ribosomal protein S10p/S20e family protein 0.89 0.29 -0.32
9 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.89 0.32 -0.3
10 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.89 0.32 -0.31
11 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.88 0.29 -0.3
12 AT1G34030 Ribosomal protein S13/S18 family 0.88 0.31 -0.31
13 AT4G14320 Zinc-binding ribosomal protein family protein 0.88 0.3 -0.33
14 AT3G56340 Ribosomal protein S26e family protein 0.88 0.31 -0.31
15 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.88 0.33 -0.32
16 AT2G19730 Ribosomal L28e protein family 0.88 0.31 -0.3
17 AT1G77750 Ribosomal protein S13/S18 family 0.88 0.31 -0.32
18 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.87 0.32 -0.3
19 AT1G48830 Ribosomal protein S7e family protein 0.87 0.3 -0.32
20 AT3G53890 Ribosomal protein S21e 0.87 0.3 -0.35
21 AT1G29250 Alba DNA/RNA-binding protein 0.87 0.32 -0.32
22 AT1G14980 chaperonin 10 chaperonin 10 0.87 0.34 -0.32
23 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.86 0.32 -0.33
24 AT4G16720 Ribosomal protein L23/L15e family protein 0.86 0.33 -0.31
25 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.86 0.32 -0.3
26 AT1G67430 Ribosomal protein L22p/L17e family protein 0.86 0.31 -0.3
27 AT5G27770 Ribosomal L22e protein family 0.86 0.32 -0.31
28 AT2G39390 Ribosomal L29 family protein 0.86 0.34 -0.33
29 AT5G23290 prefoldin 5 prefoldin 5 0.86 0.31 -0.31
30 AT3G07110 Ribosomal protein L13 family protein 0.86 0.31 -0.31
31 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.86 0.31 -0.32
32 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.85 0.3 -0.32
33 AT1G71430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 64
Blast hits to 64 proteins in 28 species: Archae - 0;
Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.85 0.32 -0.34
34 AT2G44120 Ribosomal protein L30/L7 family protein 0.85 0.31 -0.32
35 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 0.85 0.31 -0.29
36 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3		 0.85 0.32 -0.35
37 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.85 0.29 -0.3
38 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.85 0.32 -0.3
39 AT5G08040 mitochondrial import receptor subunit TOM5 homolog mitochondrial import receptor
subunit TOM5 homolog		 0.85 0.33 -0.34
40 AT3G09500 Ribosomal L29 family protein 0.85 0.33 -0.3
41 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.85 0.34 -0.31
42 AT2G19750 Ribosomal protein S30 family protein 0.84 0.31 -0.32
43 AT2G44860 Ribosomal protein L24e family protein 0.84 0.33 -0.31
44 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.84 0.32 -0.32
45 AT1G18540 Ribosomal protein L6 family protein 0.84 0.3 -0.31
46 AT5G57290 60S acidic ribosomal protein family 0.84 0.31 -0.33
47 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.84 0.29 -0.31
48 AT2G46230 PIN domain-like family protein 0.84 0.29 -0.32
49 AT5G28520 Mannose-binding lectin superfamily protein -0.84 0.32 -0.33
50 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.84 0.3 -0.3
51 AT2G25210 Ribosomal protein L39 family protein 0.84 0.33 -0.31
52 AT3G43810 calmodulin 7 calmodulin 7 0.84 0.31 -0.32
53 AT1G75560 zinc knuckle (CCHC-type) family protein 0.84 0.31 -0.31
54 AT3G02080 Ribosomal protein S19e family protein 0.84 0.34 -0.3
55 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.84 0.33 -0.3
56 AT1G04340 HR-like lesion-inducing protein-related 0.83 0.34 -0.34
57 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.83 0.3 -0.29
58 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.83 0.33 -0.32
59 AT3G05560 Ribosomal L22e protein family 0.83 0.31 -0.33
60 AT2G43460 Ribosomal L38e protein family 0.83 0.33 -0.3
61 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.83 0.33 -0.32
62 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 0.83 0.28 -0.32
63 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.83 0.33 -0.29
64 AT3G02560 Ribosomal protein S7e family protein 0.83 0.31 -0.31
65 AT5G03300 adenosine kinase 2 adenosine kinase 2 0.83 0.32 -0.33
66 AT2G19740 Ribosomal protein L31e family protein 0.83 0.33 -0.32
67 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein 0.82 0.33 -0.33
68 AT2G27710 60S acidic ribosomal protein family 0.82 0.31 -0.33
69 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.82 0.32 -0.33
70 AT4G25890 60S acidic ribosomal protein family 0.82 0.33 -0.31
71 AT4G31985 Ribosomal protein L39 family protein 0.82 0.31 -0.31
72 AT3G52590 ubiquitin extension protein 1 EMBRYO DEFECTIVE 2167,
EARLY-RESPONSIVE TO DEHYDRATION
16, HAPLESS 4, ubiquitin extension
protein 1		 0.82 0.33 -0.34
73 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.82 0.3 -0.32
74 AT4G17970 aluminum-activated, malate transporter 12 aluminum-activated, malate
transporter 12, ATALMT12		 -0.82 0.32 -0.3
75 AT4G34670 Ribosomal protein S3Ae 0.82 0.31 -0.32
76 AT4G33865 Ribosomal protein S14p/S29e family protein 0.82 0.31 -0.31
77 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.82 0.34 -0.3
78 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B 0.82 0.29 -0.31
79 AT5G06360 Ribosomal protein S8e family protein 0.81 0.32 -0.33
80 AT3G49100 Signal recognition particle, SRP9/SRP14 subunit 0.81 0.32 -0.32
81 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.81 0.29 -0.31
82 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 0.81 0.33 -0.29
83 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.81 0.31 -0.32
84 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.81 0.32 -0.34
85 AT3G44590 60S acidic ribosomal protein family 0.81 0.31 -0.33
86 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 0.81 0.32 -0.31
87 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.81 0.28 -0.33
88 AT5G23900 Ribosomal protein L13e family protein 0.81 0.3 -0.31
89 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.81 0.34 -0.3
90 AT2G41840 Ribosomal protein S5 family protein 0.81 0.33 -0.29
91 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.81 0.28 -0.3
92 AT1G26740 Ribosomal L32p protein family 0.81 0.3 -0.31
93 AT2G32380 Transmembrane protein 97, predicted 0.81 0.32 -0.29
94 AT3G16940 calmodulin binding;transcription regulators -0.8 0.31 -0.31
95 AT1G32740 SBP (S-ribonuclease binding protein) family protein -0.78 0.32 -0.31
96 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.78 0.32 -0.32
97 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.77 0.3 -0.3
98 AT3G24740 Protein of unknown function (DUF1644) -0.77 0.31 -0.33
99 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.77 0.31 -0.31
100 AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.77 0.3 -0.31
101 AT1G15740 Leucine-rich repeat family protein -0.76 0.31 -0.32
102 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.76 0.32 -0.3
103 AT1G42470 Patched family protein -0.75 0.33 -0.34
104 AT2G46680 homeobox 7 homeobox 7, ARABIDOPSIS THALIANA
HOMEOBOX 7, homeobox 7		 -0.75 0.31 -0.31
105 AT2G19900 NADP-malic enzyme 1 Arabidopsis thaliana NADP-malic
enzyme 1, NADP-malic enzyme 1		 -0.75 0.32 -0.3
106 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 -0.74 0.32 -0.33
107 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.74 0.31 -0.3
108 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.74 0.34 -0.32
109 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 -0.73 0.32 -0.29
110 AT1G80310 sulfate transmembrane transporters molybdate transporter 2 -0.73 0.32 -0.3
111 AT1G54160 nuclear factor Y, subunit A5 nuclear factor Y, subunit A5,
NUCLEAR FACTOR Y A5		 -0.73 0.32 -0.32
112 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.73 0.31 -0.3
113 AT1G07430 highly ABA-induced PP2C gene 2 highly ABA-induced PP2C gene 2 -0.73 0.3 -0.31
114 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.73 0.3 -0.31
115 AT3G13784 cell wall invertase 5 cell wall invertase 5, cell wall
invertase 5		 -0.73 0.32 -0.33
116 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 -0.72 0.3 -0.31
117 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.72 0.31 -0.31
118 AT2G18050 histone H1-3 histone H1-3 -0.72 0.32 -0.31
119 AT1G28260 Telomerase activating protein Est1 -0.72 0.34 -0.32
120 AT1G09910 Rhamnogalacturonate lyase family protein -0.71 0.32 -0.31
121 AT3G22380 time for coffee TIME FOR COFFEE -0.71 0.31 -0.3
122 AT4G03200 catalytics -0.7 0.33 -0.31
123 AT3G08020 PHD finger family protein -0.7 0.33 -0.31
124 AT3G07870 F-box and associated interaction domains-containing protein -0.7 0.32 -0.29
125 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 -0.69 0.34 -0.34
126 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.69 0.3 -0.33
127 AT4G26180 Mitochondrial substrate carrier family protein -0.69 0.32 -0.31
128 AT4G15475 F-box/RNI-like superfamily protein -0.69 0.33 -0.31
129 AT1G77800 PHD finger family protein -0.68 0.31 -0.32
130 AT5G62090 SEUSS-like 2 SEUSS-like 2 -0.68 0.31 -0.32
131 AT1G72650 TRF-like 6 TRF-like 6 -0.68 0.31 -0.32
132 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein -0.67 0.32 -0.32
133 AT1G48840 Plant protein of unknown function (DUF639) -0.67 0.31 -0.33
134 AT2G47770 TSPO(outer membrane tryptophan-rich sensory
protein)-related		 TSPO(outer membrane
tryptophan-rich sensory
protein)-related, TSPO(outer
membrane tryptophan-rich sensory
protein)-related		 -0.67 0.32 -0.3
135 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.66 0.3 -0.3
136 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 -0.66 0.31 -0.33
137 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 -0.66 0.32 -0.31
138 AT1G02080 transcription regulators -0.66 0.32 -0.31
139 AT3G20120 cytochrome P450, family 705, subfamily A, polypeptide 21 cytochrome P450, family 705,
subfamily A, polypeptide 21		 -0.66 0.29 -0.34
140 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 -0.66 0.33 -0.33
141 AT1G54360 TBP-ASSOCIATED FACTOR 6B TBP-ASSOCIATED FACTOR 6B,
TBP-ASSOCIATED FACTOR 6B1,
TBP-ASSOCIATED FACTOR 6B2,
TBP-associated factor 6B4		 -0.66 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
142 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		-0.85 0.45 -0.45 C0123
143 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.82 0.45 -0.43
144 C0189 Nicotinic acid - Nicotinate pyridine nucleotide cycling (plants),
aldoxime degradation 		-0.74 0.3 -0.31 C0189