AT3G59540 : -
Query Information
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AGICode AT3G59540
Description Ribosomal L38e protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G59540 Ribosomal L38e protein family 1 0.33 -0.33
2 AT3G06610 DNA-binding enhancer protein-related 0.87 0.32 -0.32
3 AT1G27400 Ribosomal protein L22p/L17e family protein 0.87 0.31 -0.31
4 AT5G60990 DEA(D/H)-box RNA helicase family protein 0.87 0.33 -0.31
5 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.87 0.32 -0.31
6 AT3G49180 Transducin/WD40 repeat-like superfamily protein ROOT INITIATION DEFECTIVE 3 0.87 0.34 -0.3
7 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.86 0.33 -0.31
8 AT1G01100 60S acidic ribosomal protein family 0.86 0.3 -0.3
9 AT3G16080 Zinc-binding ribosomal protein family protein 0.86 0.32 -0.33
10 AT4G26230 Ribosomal protein L31e family protein 0.86 0.33 -0.32
11 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.85 0.3 -0.32
12 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.85 0.31 -0.32
13 AT3G22230 Ribosomal L27e protein family 0.85 0.31 -0.34
14 AT3G06700 Ribosomal L29e protein family 0.85 0.33 -0.33
15 AT3G02820 zinc knuckle (CCHC-type) family protein 0.84 0.31 -0.3
16 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.84 0.31 -0.3
17 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.32 -0.32
18 AT4G34555 Ribosomal protein S25 family protein 0.83 0.31 -0.31
19 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.83 0.32 -0.31
20 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.83 0.31 -0.3
21 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.83 0.31 -0.3
22 AT2G19750 Ribosomal protein S30 family protein 0.82 0.33 -0.3
23 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 0.82 0.34 -0.3
24 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 0.82 0.33 -0.33
25 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.82 0.3 -0.34
26 AT2G33370 Ribosomal protein L14p/L23e family protein 0.82 0.31 -0.29
27 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.82 0.31 -0.32
28 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 0.82 0.29 -0.32
29 AT2G41840 Ribosomal protein S5 family protein 0.82 0.33 -0.28
30 AT4G30840 Transducin/WD40 repeat-like superfamily protein 0.82 0.31 -0.33
31 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.82 0.3 -0.32
32 AT1G52300 Zinc-binding ribosomal protein family protein 0.81 0.3 -0.31
33 AT2G19740 Ribosomal protein L31e family protein 0.81 0.34 -0.33
34 AT3G05810 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: IGR protein
motif (InterPro:IPR019083); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G26800.1); Has
62 Blast hits to 62 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.81 0.31 -0.3
35 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.8 0.3 -0.28
36 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.8 0.31 -0.31
37 AT3G10250 Plant protein 1589 of unknown function -0.8 0.33 -0.34
38 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.32 -0.3
39 AT3G44590 60S acidic ribosomal protein family 0.8 0.33 -0.33
40 AT3G56090 ferritin 3 ferritin 3, ferritin 3 0.8 0.33 -0.31
41 AT1G20370 Pseudouridine synthase family protein 0.79 0.33 -0.32
42 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.79 0.3 -0.31
43 AT2G32150 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.79 0.3 -0.31
44 AT1G15930 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.79 0.31 -0.32
45 AT3G58470 nucleic acid binding;methyltransferases 0.79 0.3 -0.31
46 AT5G41670 6-phosphogluconate dehydrogenase family protein 0.79 0.29 -0.3
47 AT5G59850 Ribosomal protein S8 family protein 0.79 0.33 -0.33
48 AT5G16130 Ribosomal protein S7e family protein 0.79 0.3 -0.31
49 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 0.79 0.32 -0.31
50 AT2G01640 unknown protein; Has 51 Blast hits to 51 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.79 0.34 -0.34
51 AT2G37190 Ribosomal protein L11 family protein 0.79 0.34 -0.32
52 AT1G04520 plasmodesmata-located protein 2 plasmodesmata-located protein 2 0.79 0.31 -0.31
53 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 0.78 0.31 -0.33
54 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.78 0.34 -0.3
55 AT1G08360 Ribosomal protein L1p/L10e family 0.78 0.27 -0.31
56 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.31 -0.31
57 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 -0.77 0.33 -0.33
58 AT3G26380 Melibiase family protein -0.77 0.29 -0.32
59 AT1G52000 Mannose-binding lectin superfamily protein -0.76 0.32 -0.31
60 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 -0.76 0.32 -0.29
61 AT5G58740 HSP20-like chaperones superfamily protein -0.76 0.32 -0.3
62 AT1G12050 fumarylacetoacetase, putative -0.75 0.32 -0.31
63 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 -0.75 0.32 -0.32
64 AT5G04040 Patatin-like phospholipase family protein SUGAR-DEPENDENT1 -0.75 0.3 -0.32
65 AT5G60360 aleurain-like protease aleurain-like protease,
aleurain-like protease, SENESCENCE
ASSOCIATED GENE2		 -0.74 0.3 -0.29
66 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.74 0.33 -0.32
67 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 -0.74 0.3 -0.33
68 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 -0.74 0.31 -0.31
69 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.74 0.3 -0.3
70 AT5G48180 nitrile specifier protein 5 nitrile specifier protein 5 -0.73 0.33 -0.32
71 AT1G02305 Cysteine proteinases superfamily protein -0.73 0.29 -0.32
72 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.72 0.35 -0.33
73 AT2G30550 alpha/beta-Hydrolases superfamily protein -0.72 0.32 -0.32
74 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.72 0.29 -0.34
75 AT4G29010 Enoyl-CoA hydratase/isomerase family ABNORMAL INFLORESCENCE MERISTEM -0.72 0.34 -0.31
76 AT5G65760 Serine carboxypeptidase S28 family protein -0.7 0.3 -0.33
77 AT4G17470 alpha/beta-Hydrolases superfamily protein -0.7 0.33 -0.3
78 AT2G22970 serine carboxypeptidase-like 11 serine carboxypeptidase-like 11 -0.7 0.31 -0.3
79 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.7 0.33 -0.32
80 AT1G51680 4-coumarate:CoA ligase 1 4-COUMARATE:COA LIGASE 1,
4-coumarate:CoA ligase 1,
ARABIDOPSIS THALIANA
4-COUMARATE:COA LIGASE 1		 -0.7 0.32 -0.34
81 AT1G52410 TSK-associating protein 1 TSK-associating protein 1 -0.69 0.32 -0.32
82 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.69 0.33 -0.31
83 AT2G43530 Scorpion toxin-like knottin superfamily protein -0.69 0.31 -0.31
84 AT3G07350 Protein of unknown function (DUF506) -0.69 0.32 -0.31
85 AT3G54360 zinc ion binding -0.69 0.32 -0.3
86 AT5G45350 proline-rich family protein -0.68 0.33 -0.31
87 AT3G22200 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 GAMMA-AMINOBUTYRATE TRANSAMINASE,
HEXENAL RESPONSE1, POLLEN-PISTIL
INCOMPATIBILITY 2		 -0.68 0.29 -0.31
88 AT5G20900 jasmonate-zim-domain protein 12 jasmonate-zim-domain protein 12,
TIFY3B		 -0.68 0.29 -0.32
89 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.29 -0.3
90 AT1G52400 beta glucosidase 18 A. THALIANA BETA-GLUCOSIDASE 1,
BETA-GLUCOSIDASE HOMOLOG 1, beta
glucosidase 18		 -0.67 0.31 -0.3
91 AT3G48350 Cysteine proteinases superfamily protein cysteine endopeptidase 3 -0.67 0.35 -0.32
92 AT5G57060 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
defense response to Gram-negative bacterium, cytolysis;
LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Channel forming colicin, C-terminal
cytotoxic (InterPro:IPR000293); BEST Arabidopsis thaliana
protein match is: Ribosomal protein L18ae family
(TAIR:AT4G26060.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.67 0.32 -0.3