AT3G59020 : -
Query Information
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AGICode AT3G59020
Description ARM repeat superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G59020 ARM repeat superfamily protein 1 0.33 -0.34
2 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase 0.89 0.31 -0.32
3 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.82 0.32 -0.28
4 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 0.81 0.32 -0.32
5 AT5G61970 signal recognition particle-related / SRP-related 0.8 0.31 -0.33
6 AT1G52160 tRNAse Z3 tRNAse Z3 0.8 0.31 -0.28
7 AT2G20585 nuclear fusion defective 6 NUCLEAR FUSION DEFECTIVE 6 0.79 0.29 -0.32
8 AT1G70420 Protein of unknown function (DUF1645) -0.79 0.31 -0.3
9 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.79 0.33 -0.28
10 AT4G19210 RNAse l inhibitor protein 2 ATP-binding cassette E2,
ARABIDOPSIS THALIANA RNASE L
INHIBITOR PROTEIN 2, RNAse l
inhibitor protein 2		 0.79 0.32 -0.28
11 AT1G06900 Insulinase (Peptidase family M16) family protein 0.79 0.3 -0.32
12 AT3G25120 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.78 0.3 -0.33
13 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.78 0.31 -0.33
14 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.78 0.31 -0.31
15 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.78 0.31 -0.3
16 AT4G23540 ARM repeat superfamily protein 0.78 0.31 -0.3
17 AT3G23940 dehydratase family 0.77 0.32 -0.28
18 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.77 0.34 -0.3
19 AT2G22125 binding cellulose synthase-interactive
protein 1, POM-POM 2		 0.77 0.31 -0.31
20 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.77 0.3 -0.32
21 AT5G62470 myb domain protein 96 MYB DOMAIN PROTEIN 96, myb domain
protein 96, MYBCOV1		 -0.76 0.34 -0.31
22 AT5G17520 root cap 1 (RCP1) MALTOSE EXCESS 1, ROOT CAP 1 -0.76 0.31 -0.3
23 AT3G15790 methyl-CPG-binding domain 11 ATMBD11, methyl-CPG-binding domain
11		 -0.76 0.33 -0.31
24 AT5G09330 NAC domain containing protein 82 NAC domain containing protein 82,
NAC domain containing protein 82,
VND-interacting 1		 0.76 0.32 -0.31
25 AT1G73240 CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup
(InterPro:IPR019049); Has 36 Blast hits to 36 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.76 0.32 -0.35
26 AT3G07060 NHL domain-containing protein embryo defective 1974 0.76 0.3 -0.32
27 AT3G22980 Ribosomal protein S5/Elongation factor G/III/V family
protein		 0.75 0.31 -0.33
28 AT1G19450 Major facilitator superfamily protein 0.75 0.32 -0.35
29 AT3G23430 phosphate 1 ARABIDOPSIS PHOSPHATE 1, phosphate
1		 0.75 0.35 -0.3
30 AT1G49540 elongator protein 2 Elongator subunit 2, elongator
protein 2		 0.75 0.32 -0.32
31 AT5G60960 Pentatricopeptide repeat (PPR) superfamily protein PPR protein localized to the
nucleus and mitochondria 1		 0.75 0.34 -0.31
32 AT2G32800 protein kinase family protein AP4.3A -0.74 0.3 -0.3
33 AT2G21390 Coatomer, alpha subunit 0.74 0.31 -0.32
34 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 0.74 0.31 -0.32
35 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.32 -0.31
36 AT4G27640 ARM repeat superfamily protein 0.74 0.31 -0.29
37 AT3G01800 Ribosome recycling factor 0.74 0.31 -0.31
38 AT2G06000 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.33 -0.31
39 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.74 0.3 -0.33
40 AT3G19620 Glycosyl hydrolase family protein -0.73 0.29 -0.3
41 AT3G25545 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 38
Blast hits to 38 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.31 -0.31
42 AT1G71400 receptor like protein 12 receptor like protein 12, receptor
like protein 12		 0.73 0.32 -0.34
43 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.73 0.32 -0.33
44 AT2G44300 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.73 0.32 -0.31
45 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 0.73 0.31 -0.3
46 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.31 -0.29
47 AT1G43690 ubiquitin interaction motif-containing protein 0.73 0.31 -0.32
48 AT1G08040 Protein of unknown function (DUF707) -0.73 0.35 -0.29
49 AT5G62600 ARM repeat superfamily protein modifier of snc1-1, 14 0.73 0.32 -0.31
50 AT3G07660 Kinase-related protein of unknown function (DUF1296) 0.73 0.32 -0.31
51 AT1G26460 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.32 -0.3
52 AT3G62360 Carbohydrate-binding-like fold 0.72 0.33 -0.32
53 AT3G61240 DEA(D/H)-box RNA helicase family protein 0.72 0.32 -0.32
54 AT1G72750 translocase inner membrane subunit 23-2 translocase inner membrane subunit
23-2, translocase inner membrane
subunit 23-2		 0.72 0.32 -0.3
55 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 0.72 0.32 -0.31
56 AT3G02350 galacturonosyltransferase 9 galacturonosyltransferase 9 0.72 0.32 -0.31
57 AT2G34300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.3 -0.31
58 AT3G17430 Nucleotide-sugar transporter family protein 0.72 0.32 -0.32
59 AT3G26370 O-fucosyltransferase family protein 0.72 0.31 -0.34
60 AT5G56950 nucleosome assembly protein 1;3 nucleosome assembly protein 1;3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 03,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A3		 0.72 0.34 -0.34
61 AT1G79750 NADP-malic enzyme 4 Arabidopsis thaliana NADP-malic
enzyme 4, NADP-malic enzyme 4		 0.72 0.31 -0.28
62 AT4G21140 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.72 0.31 -0.31
63 AT1G07770 ribosomal protein S15A ribosomal protein S15A 0.72 0.32 -0.32
64 AT2G34970 Trimeric LpxA-like enzyme 0.72 0.3 -0.31
65 AT4G30190 H(+)-ATPase 2 H(+)-ATPase 2, H(+)-ATPase 2,
PLASMA MEMBRANE PROTON ATPASE 2		 0.72 0.3 -0.31
66 AT2G41870 Remorin family protein -0.72 0.31 -0.33
67 AT5G47540 Mo25 family protein 0.72 0.31 -0.31
68 AT1G79520 Cation efflux family protein -0.71 0.31 -0.3
69 AT5G45630 Protein of unknown function, DUF584 -0.71 0.33 -0.32
70 AT1G06440 Ubiquitin carboxyl-terminal hydrolase family protein 0.71 0.31 -0.32
71 AT5G20200 nucleoporin-related 0.71 0.33 -0.32
72 AT3G57650 lysophosphatidyl acyltransferase 2 lysophosphatidyl acyltransferase 2 0.71 0.3 -0.31
73 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.71 0.31 -0.32
74 AT2G36530 Enolase ENOLASE 2, LOW EXPRESSION OF
OSMOTICALLY RESPONSIVE GENES 2		 0.71 0.32 -0.31
75 AT3G61590 Galactose oxidase/kelch repeat superfamily protein HS, HAWAIIAN SKIRT 0.71 0.31 -0.33
76 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.32 -0.3
77 AT4G31080 Protein of unknown function (DUF2296) 0.71 0.3 -0.34
78 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.7 0.3 -0.31
79 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.7 0.32 -0.31
80 AT3G07810 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7 0.31 -0.32
81 AT1G63780 Ribosomal RNA processing Brix domain protein IMP4 0.7 0.31 -0.32
82 AT5G65950 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1683, C-terminal
(InterPro:IPR012880), Foie gras liver health family 1
(InterPro:IPR021773); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.7 0.32 -0.31
83 AT1G62380 ACC oxidase 2 ACC oxidase 2, ATACO2 0.7 0.32 -0.34
84 AT2G40400 Protein of unknown function (DUF399 and DUF3411) 0.7 0.28 -0.3
85 AT1G14560 Mitochondrial substrate carrier family protein 0.7 0.31 -0.33
86 AT4G38880 GLN phosphoribosyl pyrophosphate amidotransferase 3 GLN phosphoribosyl pyrophosphate
amidotransferase 3, GLN
phosphoribosyl pyrophosphate
amidotransferase 3		 0.7 0.31 -0.3
87 AT2G41960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast
hits to 7260 proteins in 458 species: Archae - 17; Bacteria
- 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses
- 38; Other Eukaryotes - 4487 (source: NCBI BLink).		 0.7 0.32 -0.34
88 AT4G22910 FIZZY-related 2 cell cycle switch protein 52 A1,
FIZZY-related 2		 0.7 0.32 -0.3
89 AT2G28520 vacuolar proton ATPase A1 vacuolar proton ATPase A1 0.7 0.3 -0.31
90 AT1G50590 RmlC-like cupins superfamily protein -0.7 0.32 -0.32
91 AT5G10840 Endomembrane protein 70 protein family 0.7 0.33 -0.3
92 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.7 0.31 -0.3
93 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 0.7 0.31 -0.31
94 AT5G25610 BURP domain-containing protein ATRD22, RESPONSIVE TO DESSICATION
22		 -0.7 0.32 -0.3
95 AT3G27190 uridine kinase-like 2 uridine kinase-like 2 0.7 0.3 -0.31
96 AT5G17020 exportin 1A ATCRM1, ARABIDOPSIS THALIANA
EXPORTIN 1, HEAT-INTOLERANT 2,
EXPORTIN 1, exportin 1A		 0.7 0.32 -0.32
97 AT5G13500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25265.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.7 0.31 -0.32
98 AT2G42950 Magnesium transporter CorA-like family protein -0.69 0.33 -0.34
99 AT5G47640 nuclear factor Y, subunit B2 nuclear factor Y, subunit B2 -0.69 0.33 -0.31
100 AT1G19970 ER lumen protein retaining receptor family protein -0.69 0.32 -0.32
101 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.3 -0.31
102 AT5G03190 conserved peptide upstream open reading frame 47 conserved peptide upstream open
reading frame 47		 -0.69 0.31 -0.31
103 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.68 0.34 -0.34
104 AT3G02480 Late embryogenesis abundant protein (LEA) family protein -0.68 0.31 -0.3
105 AT3G14067 Subtilase family protein -0.68 0.32 -0.32
106 AT4G09600 GAST1 protein homolog 3 GAST1 protein homolog 3 -0.68 0.32 -0.33
107 AT4G28400 Protein phosphatase 2C family protein -0.68 0.33 -0.3
108 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.29 -0.31
109 AT1G19330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits
to 145 proteins in 43 species: Archae - 0; Bacteria - 0;
Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.68 0.31 -0.33
110 AT4G34480 O-Glycosyl hydrolases family 17 protein -0.67 0.32 -0.29
111 AT3G54390 sequence-specific DNA binding transcription factors -0.67 0.31 -0.32
112 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 -0.67 0.34 -0.3
113 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.66 0.33 -0.29
114 AT1G12680 phosphoenolpyruvate carboxylase-related kinase 2 phosphoenolpyruvate
carboxylase-related kinase 2		 -0.66 0.32 -0.32
115 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.66 0.3 -0.31
116 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.31 -0.33
117 AT1G76020 Thioredoxin superfamily protein -0.65 0.32 -0.32
118 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 -0.65 0.33 -0.32
119 AT5G14400 cytochrome P450, family 724, subfamily A, polypeptide 1 cytochrome P450, family 724,
subfamily A, polypeptide 1		 -0.65 0.32 -0.33
120 AT1G50740 Transmembrane proteins 14C -0.64 0.3 -0.31
121 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 -0.64 0.33 -0.32
122 AT5G47720 Thiolase family protein -0.64 0.31 -0.3
123 AT5G24750 UDP-Glycosyltransferase superfamily protein -0.64 0.31 -0.33
124 AT5G06480 Immunoglobulin E-set superfamily protein -0.63 0.31 -0.31
125 AT5G40440 mitogen-activated protein kinase kinase 3 mitogen-activated protein kinase
kinase 3, mitogen-activated
protein kinase kinase 3		 -0.63 0.35 -0.31
126 AT4G23180 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 cysteine-rich RLK (RECEPTOR-like
protein kinase) 10, RLK4		 -0.63 0.29 -0.32
127 AT5G09220 amino acid permease 2 amino acid permease 2 -0.62 0.33 -0.33
128 AT1G67870 glycine-rich protein -0.62 0.32 -0.3
129 AT3G01590 Galactose mutarotase-like superfamily protein -0.62 0.31 -0.32
130 AT1G60190 ARM repeat superfamily protein AtPUB19, plant U-box 19 -0.62 0.3 -0.33
131 AT2G19780 Leucine-rich repeat (LRR) family protein -0.62 0.32 -0.32
132 AT1G11840 glyoxalase I homolog glyoxalase I homolog, glyoxalase I
homolog		 -0.62 0.32 -0.31
133 AT1G28070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits
to 77 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.33 -0.31
134 AT1G79420 Protein of unknown function (DUF620) -0.61 0.3 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
135 C0171 MST_2182.9 - - - -0.81 0.45 -0.46
136 C0176 MST_2406.9 - - - -0.71 0.45 -0.44
137 C0169 MST_2105.7 - - - -0.66 0.47 -0.46
138 C0172 MST_2214.3 - - - -0.66 0.45 -0.44