AT3G58510 : -
Query Information
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AGICode AT3G58510
Description DEA(D/H)-box RNA helicase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G58510 DEA(D/H)-box RNA helicase family protein 1 0.32 -0.33
2 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 0.84 0.3 -0.3
3 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 0.83 0.33 -0.31
4 AT1G13030 sphere organelles protein-related 0.83 0.31 -0.33
5 AT4G32720 La protein 1 La protein 1, La protein 1 0.81 0.33 -0.32
6 AT5G20600 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: preribosome, small subunit
precursor; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits
to 530 proteins in 201 species: Archae - 0; Bacteria - 10;
Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other
Eukaryotes - 112 (source: NCBI BLink).		 0.81 0.32 -0.31
7 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.8 0.32 -0.31
8 AT3G55510 Noc2p family REBELOTE 0.8 0.35 -0.35
9 AT4G38710 glycine-rich protein 0.79 0.3 -0.3
10 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.79 0.28 -0.32
11 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f -0.79 0.32 -0.32
12 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.79 0.34 -0.31
13 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.79 0.3 -0.31
14 AT1G04080 Tetratricopeptide repeat (TPR)-like superfamily protein PRP39 0.79 0.32 -0.3
15 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 0.78 0.33 -0.31
16 AT5G60360 aleurain-like protease aleurain-like protease,
aleurain-like protease, SENESCENCE
ASSOCIATED GENE2		 -0.78 0.34 -0.31
17 AT4G28990 RNA-binding protein-related 0.78 0.32 -0.32
18 AT5G05210 Surfeit locus protein 6 0.78 0.33 -0.32
19 AT3G02760 Class II aaRS and biotin synthetases superfamily protein 0.78 0.31 -0.3
20 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.78 0.35 -0.32
21 AT5G37670 HSP20-like chaperones superfamily protein -0.78 0.33 -0.3
22 AT3G61590 Galactose oxidase/kelch repeat superfamily protein HS, HAWAIIAN SKIRT 0.78 0.31 -0.32
23 AT1G60080 3'-5'-exoribonuclease family protein 0.78 0.33 -0.29
24 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.78 0.31 -0.33
25 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA 0.77 0.31 -0.33
26 AT5G19920 Transducin/WD40 repeat-like superfamily protein 0.77 0.31 -0.3
27 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.77 0.32 -0.31
28 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.33 -0.31
29 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.77 0.33 -0.33
30 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.77 0.32 -0.37
31 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.33 -0.31
32 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 0.76 0.31 -0.31
33 AT3G45770 Polyketide synthase, enoylreductase family protein -0.76 0.33 -0.32
34 AT5G16040 Regulator of chromosome condensation (RCC1) family protein 0.76 0.31 -0.31
35 AT5G12200 pyrimidine 2 pyrimidine 2 -0.76 0.29 -0.3
36 AT1G19450 Major facilitator superfamily protein 0.76 0.31 -0.3
37 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 0.76 0.31 -0.32
38 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 0.76 0.3 -0.32
39 AT5G22320 Leucine-rich repeat (LRR) family protein 0.76 0.33 -0.32
40 AT1G48650 DEA(D/H)-box RNA helicase family protein 0.76 0.31 -0.34
41 AT2G38770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 EMBRYO DEFECTIVE 2765 0.76 0.32 -0.32
42 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.76 0.32 -0.3
43 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.76 0.34 -0.29
44 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B -0.76 0.32 -0.3
45 AT1G54380 spliceosome protein-related 0.76 0.28 -0.33
46 AT1G64530 Plant regulator RWP-RK family protein 0.76 0.3 -0.32
47 AT3G56090 ferritin 3 ferritin 3, ferritin 3 0.76 0.3 -0.31
48 AT2G22690 zinc ion binding -0.75 0.32 -0.3
49 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 0.75 0.32 -0.3
50 AT1G07230 non-specific phospholipase C1 non-specific phospholipase C1 -0.75 0.32 -0.29
51 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.75 0.29 -0.31
52 AT3G49990 unknown protein; Has 1524 Blast hits to 1298 proteins in
225 species: Archae - 9; Bacteria - 84; Metazoa - 474;
Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes -
658 (source: NCBI BLink).		 0.75 0.32 -0.32
53 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.32 -0.32
54 AT3G16840 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.31 -0.34
55 AT2G25970 KH domain-containing protein 0.74 0.32 -0.32
56 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.74 0.32 -0.31
57 AT2G37560 origin recognition complex second largest subunit 2 ORIGIN RECOGNITION COMPLEX SECOND
LARGEST SUBUNIT 2, origin
recognition complex second largest
subunit 2		 0.74 0.31 -0.29
58 AT5G19590 Protein of unknown function, DUF538 -0.74 0.3 -0.31
59 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.74 0.29 -0.32
60 AT1G69950 transposable element gene 0.74 0.29 -0.31
61 AT3G01160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NUC153
(InterPro:IPR012580); Has 36638 Blast hits to 21323
proteins in 1057 species: Archae - 109; Bacteria - 2369;
Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses -
489; Other Eukaryotes - 13360 (source: NCBI BLink).		 0.74 0.31 -0.33
62 AT5G27840 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP8 -0.74 0.33 -0.29
63 AT3G58170 BET1P/SFT1P-like protein 14A ATBET11, ARABIDOPSIS THALIANA
BET1P/SFT1P-LIKE PROTEIN 14A,
BET11, BET1P/SFT1P-like protein
14A		 -0.74 0.31 -0.35
64 AT2G01860 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 975 0.74 0.31 -0.33
65 AT4G00740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 QUASIMODO 3 0.73 0.32 -0.28
66 AT1G02305 Cysteine proteinases superfamily protein -0.73 0.31 -0.3
67 AT5G38720 unknown protein; Has 13419 Blast hits to 9093 proteins in
698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949;
Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes
- 5779 (source: NCBI BLink).		 0.73 0.29 -0.3
68 AT5G13480 Transducin/WD40 repeat-like superfamily protein FY 0.73 0.33 -0.3
69 AT1G73040 Mannose-binding lectin superfamily protein -0.73 0.29 -0.3
70 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.73 0.34 -0.31
71 AT2G29590 Thioesterase superfamily protein -0.73 0.33 -0.32
72 AT1G05060 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.33 -0.31
73 AT1G74410 RING/U-box superfamily protein -0.72 0.31 -0.32
74 AT3G16230 Predicted eukaryotic LigT -0.72 0.3 -0.31
75 AT1G47128 Granulin repeat cysteine protease family protein responsive to dehydration 21,
RESPONSIVE TO DEHYDRATION 21A		 -0.72 0.31 -0.31
76 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.72 0.35 -0.33
77 AT4G11960 PGR5-like B PGR5-like B -0.72 0.31 -0.34
78 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 -0.71 0.33 -0.32
79 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.7 0.3 -0.32
80 AT5G42850 Thioredoxin superfamily protein -0.7 0.29 -0.32
81 AT5G41210 glutathione S-transferase THETA 1 glutathione S-transferase THETA 1,
GST10, glutathione S-transferase
THETA 1		 -0.7 0.32 -0.33
82 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.31 -0.31
83 AT3G01200 PPDK regulatory protein 2 PPDK regulatory protein 2, PPDK
regulatory protein 2		 -0.69 0.3 -0.33
84 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.32 -0.29
85 AT5G58740 HSP20-like chaperones superfamily protein -0.69 0.31 -0.33
86 AT5G45350 proline-rich family protein -0.68 0.3 -0.3
87 AT1G77420 alpha/beta-Hydrolases superfamily protein -0.68 0.32 -0.33
88 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 -0.67 0.33 -0.32
89 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.67 0.34 -0.32
90 AT4G12010 Disease resistance protein (TIR-NBS-LRR class) family -0.66 0.32 -0.31
91 AT2G32080 purin-rich alpha 1 purin-rich alpha 1 -0.66 0.32 -0.32
92 AT4G27470 RING membrane-anchor 3 ATRMA3, RING membrane-anchor 3 -0.66 0.34 -0.32
93 AT5G23240 DNAJ heat shock N-terminal domain-containing protein -0.66 0.3 -0.33
94 AT3G27420 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.66 0.31 -0.32
95 AT4G05530 indole-3-butyric acid response 1 indole-3-butyric acid response 1,
SHORT-CHAIN
DEHYDROGENASE/REDUCTASE A		 -0.65 0.32 -0.31
96 AT5G19860 Protein of unknown function, DUF538 -0.65 0.33 -0.31
97 AT1G78890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.32 -0.33
98 AT1G55000 peptidoglycan-binding LysM domain-containing protein -0.65 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
99 C0130 Kaempferol-3-O-α-rhamnopyranosyl(1,2)-β-glucopyranoside-7-O-α-rhamnopyranoside Kaempferol-3-O-α-L-rhamnopyranosyl(1,2)-β-D-glucopyranoside-7-O-α-L-rhamnopyranoside - -0.71 0.45 -0.49
100 C0180 MST_2539.9 - - - -0.68 0.49 -0.48
101 C0158 MST_1480.5 - - - -0.67 0.45 -0.45