AT3G58740 : citrate synthase 1
Query Information
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AGICode AT3G58740
Description citrate synthase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G58740 citrate synthase 1 citrate synthase 1 1 0.33 -0.3
2 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 -0.72 0.32 -0.31
3 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 0.68 0.31 -0.32
4 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein 0.68 0.31 -0.31
5 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.35 -0.33
6 AT5G37890 Protein with RING/U-box and TRAF-like domains -0.66 0.3 -0.35
7 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.31 -0.32
8 AT1G17720 Protein phosphatase 2A, regulatory subunit PR55 ATB BETA 0.65 0.29 -0.32
9 AT4G40050 Protein of unknown function (DUF3550/UPF0682) 0.65 0.32 -0.28
10 AT5G15020 SIN3-like 2 SIN3-like 2 0.65 0.32 -0.34
11 AT5G65560 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.34 -0.33
12 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.63 0.31 -0.31
13 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.63 0.32 -0.31
14 AT5G59860 RNA-binding (RRM/RBD/RNP motifs) family protein 0.63 0.32 -0.35
15 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.3 -0.33
16 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.62 0.31 -0.3
17 AT3G57100 Protein of unknown function (DUF677) -0.62 0.31 -0.34
18 AT5G51420 long-chain-alcohol O-fatty-acyltransferase family protein /
wax synthase family protein		 0.62 0.33 -0.33
19 AT1G22480 Cupredoxin superfamily protein -0.62 0.31 -0.32
20 AT2G11150 transposable element gene 0.61 0.32 -0.33
21 AT1G75930 extracellular lipase 6 extracellular lipase 6 -0.61 0.33 -0.32
22 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein		 -0.61 0.32 -0.31
23 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.61 0.34 -0.29
24 AT2G43160 ENTH/VHS family protein 0.61 0.3 -0.3
25 AT3G05670 RING/U-box protein 0.61 0.32 -0.32
26 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product		 0.6 0.31 -0.33
27 AT1G66030 cytochrome P450, family 96, subfamily A, polypeptide 14
pseudogene		 cytochrome P450, family 96,
subfamily A, polypeptide 14
pseudogene		 0.59 0.32 -0.32
28 AT5G55750 hydroxyproline-rich glycoprotein family protein 0.59 0.32 -0.34
29 AT5G12050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.32 -0.33
30 AT1G21510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cotyledon; Has
380 Blast hits to 286 proteins in 63 species: Archae - 0;
Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13;
Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink).		 -0.59 0.32 -0.36
31 AT1G53080 Legume lectin family protein -0.59 0.3 -0.34
32 AT3G53060 SKP1-like 6 SKP1-like 6, SKP1-like 6 -0.59 0.31 -0.31
33 AT4G38590 beta-galactosidase 14 beta-galactosidase 14 0.58 0.3 -0.33
34 AT5G11460 Protein of unknown function (DUF581) -0.58 0.31 -0.31
35 AT4G38670 Pathogenesis-related thaumatin superfamily protein -0.58 0.32 -0.33
36 AT4G04650 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.58 0.3 -0.32
37 AT4G13090 xyloglucan endotransglucosylase/hydrolase 2 xyloglucan
endotransglucosylase/hydrolase 2		 -0.58 0.31 -0.31
38 AT5G48330 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 2 -0.57 0.31 -0.33
39 AT3G55180 alpha/beta-Hydrolases superfamily protein 0.57 0.29 -0.32
40 AT5G15070 Phosphoglycerate mutase-like family protein 0.57 0.32 -0.31
41 AT4G27910 SET domain protein 16 ATX4, SET domain protein 16 0.57 0.3 -0.3
42 AT3G59270 FBD-like domain family protein 0.57 0.33 -0.34
43 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 0.57 0.31 -0.33
44 AT3G06560 poly(A) polymerase 3 poly(A) polymerase 3 -0.57 0.3 -0.3
45 AT5G15581 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: leaf apex; Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.3 -0.32
46 AT1G57650 ATP binding 0.56 0.33 -0.32
47 AT1G05120 Helicase protein with RING/U-box domain 0.56 0.34 -0.29
48 AT1G27370 squamosa promoter binding protein-like 10 squamosa promoter binding
protein-like 10		 0.56 0.32 -0.3
49 AT3G24060 Plant self-incompatibility protein S1 family 0.55 0.29 -0.31
50 AT4G13960 F-box/RNI-like superfamily protein -0.55 0.31 -0.31
51 AT1G13540 Protein of unknown function (DUF1262) -0.55 0.31 -0.32
52 AT3G24260 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting
(InterPro:IPR013194); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G28870.1); Has 220 Blast
hits to 218 proteins in 65 species: Archae - 7; Bacteria -
6; Metazoa - 43; Fungi - 2; Plants - 115; Viruses - 0;
Other Eukaryotes - 47 (source: NCBI BLink).		 -0.55 0.32 -0.32
53 AT5G56460 Protein kinase superfamily protein 0.55 0.32 -0.33
54 AT1G47720 Primosome PriB/single-strand DNA-binding Organellar Single-stranded 0.55 0.3 -0.34
55 AT1G29870 tRNA synthetase class II (G, H, P and S) family protein -0.54 0.32 -0.31
56 AT1G57750 cytochrome P450, family 96, subfamily A, polypeptide 15 cytochrome P450, family 96,
subfamily A, polypeptide 15,
MID-CHAIN ALKANE HYDROXYLASE 1		 -0.53 0.32 -0.32
57 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 -0.53 0.3 -0.29
58 AT5G03980 SGNH hydrolase-type esterase superfamily protein -0.53 0.31 -0.31
59 AT3G62350 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G71320.1); Has 136 Blast hits to 136
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes -
2 (source: NCBI BLink).		 -0.52 0.33 -0.33
60 AT2G45960 plasma membrane intrinsic protein 1B ATHH2, NAMED PLASMA MEMBRANE
INTRINSIC PROTEIN 1;2, plasma
membrane intrinsic protein 1B,
TRANSMEMBRANE PROTEIN A		 -0.52 0.32 -0.31
61 AT3G50050 Eukaryotic aspartyl protease family protein -0.52 0.31 -0.33
62 AT5G33200 transposable element gene -0.51 0.31 -0.3
63 AT2G14300 transposable element gene -0.51 0.34 -0.3
64 AT1G12230 Aldolase superfamily protein -0.51 0.32 -0.32
65 AT1G27220 paired amphipathic helix repeat-containing protein -0.51 0.35 -0.31
66 AT2G18970 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
67 C0145 Maltotetraose - Maltotetraose starch degradation II 0.74 0.47 -0.45 C0145
68 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.7 0.46 -0.49 C0136
69 C0065 Cellobiose D-(+)-Cellobiose Cellobiose xyloglucan biosynthesis,
starch degradation I 		0.57 0.32 -0.3 C0065