AT3G58290 : -
Query Information
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AGICode AT3G58290
Description TRAF-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G58290 TRAF-like superfamily protein 1 0.32 -0.31
2 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 -0.7 0.31 -0.31
3 AT4G34430 DNA-binding family protein SWITCH/SUCROSE NONFERMENTING 3D,
CHB3		 -0.63 0.32 -0.32
4 AT1G09000 NPK1-related protein kinase 1 NPK1-related protein kinase 1, MAP
KINASE KINASE KINASE 1,
NPK1-related protein kinase 1		 -0.6 0.31 -0.32
5 AT2G39950 unknown protein; Has 978 Blast hits to 254 proteins in 81
species: Archae - 0; Bacteria - 8; Metazoa - 109; Fungi -
53; Plants - 41; Viruses - 0; Other Eukaryotes - 767
(source: NCBI BLink).		 -0.6 0.33 -0.31
6 AT5G23630 phosphate deficiency response 2 MALE GAMETOGENESIS IMPAIRED
ANTHERS, phosphate deficiency
response 2, PI DEFICIENCY RESPONSE
2		 -0.59 0.32 -0.29
7 AT1G42690 transposable element gene 0.58 0.35 -0.33
8 AT1G05800 alpha/beta-Hydrolases superfamily protein DONGLE -0.58 0.34 -0.31
9 AT2G03190 SKP1-like 16 SKP1-like 16, SKP1-like 16 -0.58 0.31 -0.33
10 AT1G21550 Calcium-binding EF-hand family protein 0.58 0.31 -0.32
11 AT3G12000 S-locus related protein SLR1, putative (S1) -0.58 0.3 -0.31
12 AT4G39756 Galactose oxidase/kelch repeat superfamily protein 0.57 0.34 -0.29
13 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 0.57 0.31 -0.31
14 AT2G16880 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.31 -0.31
15 AT1G30473 Heavy metal transport/detoxification superfamily protein 0.56 0.29 -0.31
16 AT5G63900 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.56 0.31 -0.35
17 AT4G10280 RmlC-like cupins superfamily protein 0.56 0.33 -0.31
18 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 -0.55 0.32 -0.31
19 AT5G03640 Protein kinase superfamily protein -0.55 0.32 -0.31
20 AT5G24710 Transducin/WD40 repeat-like superfamily protein -0.55 0.32 -0.32
21 AT2G06950 transposable element gene -0.55 0.31 -0.3
22 AT1G46696 Protein of unknown function, DUF601 -0.55 0.31 -0.31
23 AT2G04830 Protein of unknown function (DUF295) -0.54 0.33 -0.3
24 AT2G02640 Cysteine/Histidine-rich C1 domain family protein 0.54 0.31 -0.31
25 AT4G20800 FAD-binding Berberine family protein -0.54 0.33 -0.31
26 AT5G48990 Galactose oxidase/kelch repeat superfamily protein -0.54 0.3 -0.29
27 AT1G65880 benzoyloxyglucosinolate 1 benzoyloxyglucosinolate 1 0.54 0.31 -0.32
28 AT3G32050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14780.1); Has 22 Blast hits
to 22 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.29 -0.31
29 AT3G30220 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.53 0.33 -0.32
30 AT4G31250 Leucine-rich repeat protein kinase family protein -0.53 0.3 -0.32
31 AT3G20030 F-box and associated interaction domains-containing protein 0.53 0.3 -0.32
32 AT1G01780 GATA type zinc finger transcription factor family protein PLIM2b -0.52 0.31 -0.33
33 AT5G61350 Protein kinase superfamily protein -0.52 0.32 -0.33
34 AT3G10580 Homeodomain-like superfamily protein -0.52 0.33 -0.32
35 AT1G56030 RING/U-box superfamily protein 0.52 0.33 -0.32
36 AT3G12380 actin-related protein 5 actin-related protein 5,
ACTIN-RELATED PROTEIN 5		 -0.52 0.31 -0.33
37 AT3G16550 DEGP protease 12 DEGP protease 12 -0.52 0.28 -0.32
38 AT1G34540 cytochrome P450, family 94, subfamily D, polypeptide 1 cytochrome P450, family 94,
subfamily D, polypeptide 1		 -0.52 0.32 -0.31
39 AT2G22100 RNA-binding (RRM/RBD/RNP motifs) family protein -0.52 0.3 -0.33
40 AT2G04580 transposable element gene 0.51 0.33 -0.31
41 AT3G49630 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.51 0.33 -0.3
42 AT3G21780 UDP-glucosyl transferase 71B6 UDP-glucosyl transferase 71B6 0.51 0.31 -0.34
43 AT5G28440 unknown protein -0.51 0.31 -0.3
44 AT1G73050 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.51 0.3 -0.32
45 AT1G65450 HXXXD-type acyl-transferase family protein 0.51 0.34 -0.3
46 AT1G10620 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 11, proline-rich
extensin-like receptor kinase 11		 -0.51 0.32 -0.3
47 AT2G05820 transposable element gene 0.51 0.31 -0.29
48 AT2G25230 myb domain protein 100 myb domain protein 100, myb domain
protein 100		 0.5 0.29 -0.3
49 AT2G35570 pseudogene, serpin (serine protease inhibitor) family,
similar to phloem serpin-1 (Cucurbita maxima) GI:9937311;
blastp match of 49% identity and 9.9e-85 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 0.5 0.31 -0.32
50 AT5G17910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G29620.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.5 0.32 -0.32
51 AT5G55330 MBOAT (membrane bound O-acyl transferase) family protein -0.5 0.3 -0.32
52 AT3G42360 transposable element gene -0.5 0.32 -0.31
53 AT3G43650 transposable element gene -0.5 0.33 -0.32
54 AT4G26540 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.5 0.32 -0.33
55 AT3G18720 F-box family protein -0.5 0.36 -0.32
56 AT2G20190 CLIP-associated protein CLIP-ASSOCIATED PROTEIN,
CLIP-associated protein		 -0.5 0.32 -0.3
57 AT5G43590 Acyl transferase/acyl hydrolase/lysophospholipase
superfamily protein		 -0.49 0.3 -0.31
58 AT3G33073 transposable element gene 0.49 0.34 -0.3
59 AT3G06940 transposable element gene -0.49 0.32 -0.32
60 AT2G13950 Cysteine/Histidine-rich C1 domain family protein 0.49 0.33 -0.32
61 AT1G27410 DNA repair metallo-beta-lactamase family protein -0.49 0.3 -0.33
62 AT2G33540 C-terminal domain phosphatase-like 3 ATCPL3, C-terminal domain
phosphatase-like 3		 -0.49 0.31 -0.32
63 AT5G47850 CRINKLY4 related 4 CRINKLY4 related 4 0.49 0.31 -0.33
64 AT1G64010 Serine protease inhibitor (SERPIN) family protein -0.49 0.29 -0.31
65 AT2G04675 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.48 0.32 -0.32
66 AT3G09790 ubiquitin 8 ubiquitin 8 -0.48 0.3 -0.34
67 AT2G47900 tubby like protein 3 tubby like protein 3, tubby like
protein 3		 -0.48 0.31 -0.34
68 AT5G60110 pumilio 18 pumilio 18, pumilio 18 -0.48 0.31 -0.33
69 AT1G30460 cleavage and polyadenylation specificity factor 30 ARABIDOPSIS THALIANA CLEAVAGE AND
POLYADENYLATION SPECIFICITY FACTOR
30, cleavage and polyadenylation
specificity factor 30		 -0.48 0.31 -0.32
70 AT2G07280 unknown protein; Has 19 Blast hits to 19 proteins in 3
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.48 0.35 -0.34
71 AT4G26050 plant intracellular ras group-related LRR 8 plant intracellular ras
group-related LRR 8		 -0.48 0.3 -0.32
72 AT1G67070 Mannose-6-phosphate isomerase, type I DARK INDUCIBLE 9, PHOSPHOMANNOSE
ISOMERASE 2		 -0.48 0.33 -0.31
73 AT3G01730 unknown protein; Has 8 Blast hits to 8 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.47 0.32 -0.33
74 AT2G19960 hAT family dimerisation domain -0.47 0.34 -0.31
75 AT2G11110 transposable element gene 0.47 0.35 -0.3
76 AT5G25070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.47 0.32 -0.32
77 AT1G47520 transposable element gene -0.47 0.32 -0.32
78 AT1G07380 Neutral/alkaline non-lysosomal ceramidase 0.47 0.3 -0.3
79 AT5G36260 Eukaryotic aspartyl protease family protein -0.47 0.33 -0.33
80 AT2G31770 RING/U-box superfamily protein ARIADNE 9, ARABIDOPSIS ARIADNE 9 0.47 0.3 -0.29
81 AT2G30680 BEST Arabidopsis thaliana protein match is: glucan
synthase-like 3 (TAIR:AT2G31960.2); Has 80 Blast hits to 80
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.46 0.3 -0.31
82 AT5G45260 Disease resistance protein (TIR-NBS-LRR class) ARABIDOPSIS THALIANA WRKY DOMAIN
PROTEIN 52, RESISTANT TO RALSTONIA
SOLANACEARUM 1, SENSITIVE TO LOW
HUMIDITY 1		 -0.46 0.32 -0.34
83 AT3G23220 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 1 0.46 0.32 -0.31
84 AT2G22830 squalene epoxidase 2 squalene epoxidase 2 -0.46 0.3 -0.35
85 AT4G04550 transposable element gene -0.46 0.31 -0.3
86 AT1G44120 Armadillo/beta-catenin-like repeat ; C2
calcium/lipid-binding domain (CaLB) protein		 0.46 0.33 -0.31
87 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER -0.46 0.3 -0.31
88 AT3G12190 BEST Arabidopsis thaliana protein match is: Frigida-like
protein (TAIR:AT5G27220.1); Has 43637 Blast hits to 24906
proteins in 1566 species: Archae - 743; Bacteria - 4122;
Metazoa - 22377; Fungi - 2585; Plants - 1803; Viruses -
158; Other Eukaryotes - 11849 (source: NCBI BLink).		 -0.46 0.33 -0.33
89 AT5G17370 Transducin/WD40 repeat-like superfamily protein 0.46 0.32 -0.32
90 AT5G28670 transposable element gene 0.46 0.31 -0.34
91 AT3G29070 emp24/gp25L/p24 family/GOLD family protein -0.46 0.32 -0.34
92 AT1G61860 Protein kinase superfamily protein -0.46 0.33 -0.29
93 AT4G09610 GAST1 protein homolog 2 GAST1 protein homolog 2 -0.46 0.33 -0.32
94 AT5G32540 transposable element gene 0.46 0.32 -0.3
95 AT1G30020 Protein of unknown function, DUF538 -0.46 0.29 -0.34
96 AT3G28620 Zinc finger, C3HC4 type (RING finger) family protein 0.45 0.3 -0.3
97 AT4G18350 nine-cis-epoxycarotenoid dioxygenase 2 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 2,
nine-cis-epoxycarotenoid
dioxygenase 2		 0.45 0.33 -0.31
98 AT1G24210 Paired amphipathic helix (PAH2) superfamily protein 0.45 0.34 -0.32
99 AT2G40260 Homeodomain-like superfamily protein 0.44 0.34 -0.31
100 AT4G29640 Cytidine/deoxycytidylate deaminase family protein 0.43 0.33 -0.32
101 AT4G28110 myb domain protein 41 myb domain protein 41, myb domain
protein 41		 0.43 0.33 -0.34
102 AT3G03180 Got1/Sft2-like vescicle transport protein family 0.43 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0247 Sulfoquinovosyldiacylglycerol-34:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.71 0.51 -0.5 C0247
104 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.68 0.5 -0.51 C0251
105 C0085 Digalactosyldiacylglycerol-36:6 - Digalactosyldiacylglycerol-36:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.66 0.52 -0.49 C0085
106 C0152 Monogalactosyldiacylgycerol-34:5 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.48 0.33 -0.33
107 C0150 Monogalactosyldiacylgycerol-34:3 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.47 0.32 -0.32
108 C0122 Isohexylglucosinolate - - - -0.47 0.32 -0.29