AT3G58180 : -
Query Information
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AGICode AT3G58180
Description ARM repeat superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G58180 ARM repeat superfamily protein 1 0.32 -0.3
2 AT3G05070 CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18
(InterPro:IPR013169); Has 292 Blast hits to 292 proteins in
153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi
- 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42
(source: NCBI BLink).		 0.83 0.32 -0.3
3 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.79 0.31 -0.3
4 AT5G09380 RNA polymerase III RPC4 0.78 0.31 -0.33
5 AT5G61220 LYR family of Fe/S cluster biogenesis protein 0.77 0.34 -0.31
6 AT3G62810 complex 1 family protein / LVR family protein 0.76 0.32 -0.32
7 AT3G30300 O-fucosyltransferase family protein -0.75 0.32 -0.33
8 AT3G03420 Ku70-binding family protein 0.75 0.33 -0.31
9 AT1G15340 methyl-CPG-binding domain 10 methyl-CPG-binding domain 10 -0.75 0.29 -0.31
10 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.32 -0.33
11 AT1G22060 LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: FBD, F-box and Leucine Rich
Repeat domains containing protein (TAIR:AT1G22000.1); Has
84739 Blast hits to 38714 proteins in 2257 species: Archae
- 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706;
Plants - 4675; Viruses - 308; Other Eukaryotes - 18553
(source: NCBI BLink).		 -0.73 0.33 -0.32
12 AT3G25670 Leucine-rich repeat (LRR) family protein -0.72 0.3 -0.3
13 AT2G45790 phosphomannomutase PHOSPHOMANNOMUTASE,
phosphomannomutase		 0.72 0.3 -0.32
14 AT4G14150 phragmoplast-associated kinesin-related protein 1 KINESIN-12A,
phragmoplast-associated
kinesin-related protein 1		 -0.71 0.32 -0.32
15 AT5G40530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.71 0.31 -0.32
16 AT5G19180 E1 C-terminal related 1 E1 C-terminal related 1 0.7 0.3 -0.29
17 AT5G20400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.7 0.31 -0.33
18 AT2G03800 D-aminoacyl-tRNA deacylases GEKO1 0.7 0.3 -0.31
19 AT4G16210 enoyl-CoA hydratase/isomerase A ENOYL-COA HYDRATASE 2, enoyl-CoA
hydratase/isomerase A		 0.7 0.31 -0.32
20 AT3G05640 Protein phosphatase 2C family protein -0.7 0.29 -0.33
21 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.7 0.31 -0.3
22 AT1G05460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SILENCING DEFECTIVE -0.69 0.3 -0.3
23 AT3G48570 secE/sec61-gamma protein transport protein 0.69 0.34 -0.3
24 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.69 0.3 -0.33
25 AT5G42970 Proteasome component (PCI) domain protein ATS4, CONSTITUTIVE
PHOTOMORPHOGENIC 14, CONSTITUTIVE
PHOTOMORPHOGENIC 8, COP9
SIGNALOSOME SUBUNIT 4, EMBRYO
DEFECTIVE 134, FUSCA 4, FUSCA 8		 0.69 0.33 -0.32
26 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 -0.69 0.32 -0.33
27 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 0.68 0.36 -0.31
28 AT5G16060 Cytochrome c oxidase biogenesis protein Cmc1-like 0.68 0.31 -0.3
29 AT1G07150 mitogen-activated protein kinase kinase kinase 13 mitogen-activated protein kinase
kinase kinase 13		 0.68 0.33 -0.31
30 AT2G44065 Ribosomal protein L2 family 0.68 0.32 -0.31
31 AT3G61670 Protein of unknown function (DUF3133) -0.68 0.31 -0.31
32 AT2G42840 protodermal factor 1 protodermal factor 1 -0.67 0.34 -0.31
33 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 0.67 0.33 -0.34
34 AT5G04590 sulfite reductase sulfite reductase 0.67 0.31 -0.32
35 AT5G66560 Phototropic-responsive NPH3 family protein -0.67 0.31 -0.32
36 AT1G68020 UDP-Glycosyltransferase / trehalose-phosphatase family
protein		 ATTPS6, TREHALOSE -6-PHOSPHATASE
SYNTHASE S6		 -0.66 0.32 -0.31
37 AT4G33890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14850.1); Has 133 Blast hits
to 131 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 129; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.66 0.3 -0.32
38 AT2G45240 methionine aminopeptidase 1A methionine aminopeptidase 1A 0.66 0.34 -0.33
39 AT1G01900 subtilase family protein ATSBT1.1, SBTI1.1 -0.66 0.32 -0.33
40 AT1G60860 ARF-GAP domain 2 ARF-GAP domain 2 -0.66 0.32 -0.31
41 AT3G18850 lysophosphatidyl acyltransferase 5 lysophosphatidyl acyltransferase 5 -0.66 0.35 -0.31
42 AT3G52710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast
hits to 64 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.33 -0.3
43 AT1G26470 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of transcription; LOCATED IN: nucleus, H4/H2A
histone acetyltransferase complex; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast
hits to 60 proteins in 27 species: Archae - 0; Bacteria -
0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.65 0.34 -0.32
44 AT5G46450 Disease resistance protein (TIR-NBS-LRR class) family 0.65 0.33 -0.31
45 AT4G24830 arginosuccinate synthase family 0.65 0.31 -0.31
46 AT5G53540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.31 -0.31
47 AT3G02480 Late embryogenesis abundant protein (LEA) family protein -0.64 0.34 -0.3
48 AT5G20050 Protein kinase superfamily protein 0.64 0.31 -0.3
49 AT5G26110 Protein kinase superfamily protein 0.64 0.31 -0.34
50 AT5G44180 Homeodomain-like transcriptional regulator -0.63 0.35 -0.33
51 AT3G49880 glycosyl hydrolase family protein 43 -0.63 0.29 -0.33
52 AT4G27270 Quinone reductase family protein 0.63 0.31 -0.33
53 AT5G15610 Proteasome component (PCI) domain protein 0.63 0.31 -0.32
54 AT4G29735 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0197
(InterPro:IPR007915); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.63 0.31 -0.32
55 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 0.63 0.3 -0.33
56 AT5G20270 heptahelical transmembrane protein1 heptahelical transmembrane
protein1		 -0.63 0.33 -0.3
57 AT4G18270 translocase 11 ARABIDOPSIS THALIANA TRANSLOCASE
11, translocase 11		 -0.63 0.31 -0.32
58 AT1G61370 S-locus lectin protein kinase family protein 0.63 0.32 -0.32
59 AT4G26540 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.63 0.33 -0.31
60 AT1G23820 spermidine synthase 1 spermidine synthase 1 0.63 0.3 -0.32
61 AT5G60870 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 3 0.63 0.3 -0.33
62 AT2G04630 RNA polymerase Rpb6 NRPB6B, NRPE6B 0.62 0.33 -0.31
63 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10		 -0.62 0.35 -0.32
64 AT3G53540 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF3741)
(TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in
206 species: Archae - 2; Bacteria - 409; Metazoa - 304;
Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes -
485 (source: NCBI BLink).		 -0.62 0.3 -0.32
65 AT1G76860 Small nuclear ribonucleoprotein family protein 0.62 0.31 -0.32
66 AT3G09970 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.61 0.32 -0.3
67 AT1G55460 DNA/RNA-binding protein Kin17, conserved region -0.61 0.31 -0.31
68 AT3G57785 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits
to 121 proteins in 51 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.61 0.32 -0.31
69 AT1G80860 phospholipid N-methyltransferase ARABIDOPSIS PHOSPHOLIPID
N-METHYLTRANSFERASE, phospholipid
N-methyltransferase		 0.61 0.31 -0.32
70 AT3G20430 CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA
export protein, RNA-binding domain (InterPro:IPR019385);
Has 110 Blast hits to 110 proteins in 51 species: Archae -
0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36;
Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).		 0.61 0.32 -0.32
71 AT1G06460 alpha-crystallin domain 32.1 ALPHA-CRYSTALLIN DOMAIN 31.2,
alpha-crystallin domain 32.1		 -0.61 0.29 -0.31
72 AT4G35190 Putative lysine decarboxylase family protein LONELY GUY 5 -0.61 0.3 -0.3
73 AT2G29380 highly ABA-induced PP2C gene 3 highly ABA-induced PP2C gene 3 -0.61 0.33 -0.29
74 AT5G51210 oleosin3 oleosin3 -0.61 0.32 -0.3
75 AT4G03560 two-pore channel 1 CALCIUM CHANNEL 1, two-pore
channel 1, FATTY ACID OXYGENATION
UPREGULATED 2, TPC1, two-pore
channel 1		 -0.6 0.34 -0.3
76 AT1G79420 Protein of unknown function (DUF620) -0.59 0.33 -0.32
77 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 -0.59 0.31 -0.32
78 AT1G01520 Homeodomain-like superfamily protein ALTERED SEED GERMINATION 4 -0.59 0.31 -0.31
79 AT1G27190 Leucine-rich repeat protein kinase family protein -0.59 0.33 -0.31
80 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE -0.59 0.31 -0.33
81 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS -0.59 0.35 -0.31
82 ATCG00160 ribosomal protein S2 ribosomal protein S2 -0.59 0.3 -0.32
83 AT5G44670 Domain of unknown function (DUF23) -0.59 0.3 -0.35
84 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 -0.59 0.31 -0.33
85 AT5G47390 myb-like transcription factor family protein -0.59 0.33 -0.32
86 AT5G60720 Protein of unknown function, DUF547 -0.59 0.28 -0.33
87 AT1G67140 HEAT repeat-containing protein SWEETIE -0.58 0.33 -0.32
88 AT3G50690 Leucine-rich repeat (LRR) family protein -0.58 0.33 -0.3
89 AT2G47900 tubby like protein 3 tubby like protein 3, tubby like
protein 3		 -0.58 0.33 -0.31
90 AT4G39680 SAP domain-containing protein -0.58 0.32 -0.32
91 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATRX, CHR20 -0.58 0.33 -0.33
92 AT1G55350 calpain-type cysteine protease family ATDEK1, DEFECTIVE KERNEL 1, embryo
defective 1275, EMBRYO DEFECTIVE
80		 -0.58 0.31 -0.3
93 AT1G71980 Protease-associated (PA) RING/U-box zinc finger family
protein		 -0.57 0.32 -0.3
94 AT1G55180 phospholipase D alpha 4 PLDALPHA4, phospholipase D alpha 4 -0.57 0.32 -0.3
95 AT3G55500 expansin A16 ATEXP16, expansin A16, ATHEXP
ALPHA 1.7, EXPANSIN 16, expansin
A16		 -0.57 0.32 -0.32
96 AT1G65380 Leucine-rich repeat (LRR) family protein Receptor Like Protein 10, clavata
2		 -0.57 0.32 -0.31
97 AT1G05630 Endonuclease/exonuclease/phosphatase family protein 5PTASE13, AT5PTASE13 -0.57 0.3 -0.31
98 AT4G36600 Late embryogenesis abundant (LEA) protein -0.57 0.32 -0.37
99 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 -0.57 0.32 -0.32
100 AT4G01120 G-box binding factor 2 BASIC REGION/LEUCINE ZIPPER MOTIF
5, G-box binding factor 2		 -0.57 0.34 -0.31
101 AT1G64960 ARM repeat superfamily protein hypersensitive to excess boron 1 -0.57 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.79 0.42 -0.43 C0266
103 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.73 0.46 -0.49 C0251
104 C0267 Zeatin cis-Zeatin cis-Zeatin cytokinins-O-glucoside biosynthesis,
cytokinins degradation,
cytokinins 7-N-glucoside biosynthesis,
cytokinins 9-N-glucoside biosynthesis,
cis-zeatin biosynthesis 		-0.68 0.42 -0.43 C0267
105 C0250 Sulfoquinovosyldiacylglycerol-36:5 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.64 0.33 -0.34 C0250
106 C0249 Sulfoquinovosyldiacylglycerol-36:4 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.57 0.32 -0.32 C0249