AT3G58630 : -
Query Information
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AGICode AT3G58630
Description sequence-specific DNA binding transcription factors
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G58630 sequence-specific DNA binding transcription factors 1 0.34 -0.31
2 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.68 0.32 -0.32
3 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 0.68 0.32 -0.35
4 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.32 -0.31
5 AT4G22310 Uncharacterised protein family (UPF0041) 0.67 0.31 -0.33
6 AT2G28430 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.3 -0.32
7 AT3G13445 TATA binding protein 1 TATA binding protein 1,
TRANSCRIPTION FACTOR IID-1		 0.66 0.33 -0.3
8 AT4G34265 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast
hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.31
9 AT4G17510 ubiquitin C-terminal hydrolase 3 ubiquitin C-terminal hydrolase 3 0.64 0.31 -0.31
10 AT2G44620 mitochondrial acyl carrier protein 1 mitochondrial acyl carrier protein
1, MITOCHONDRIAL ACYL CARRIER
PROTEIN 1		 0.64 0.31 -0.3
11 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 0.63 0.32 -0.32
12 AT3G55460 SC35-like splicing factor 30 SC35-like splicing factor 30,
SC35-like splicing factor 30		 0.63 0.3 -0.33
13 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.63 0.32 -0.31
14 AT1G54650 Methyltransferase family protein 0.63 0.3 -0.31
15 AT3G27770 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G62960.1); Has 158 Blast hits to 157 proteins in
21 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi -
0; Plants - 141; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.61 0.32 -0.31
16 AT5G20060 alpha/beta-Hydrolases superfamily protein 0.61 0.33 -0.33
17 AT2G04870 unknown protein; Has 14 Blast hits to 14 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 5 (source: NCBI
BLink).		 0.6 0.3 -0.29
18 AT5G10980 Histone superfamily protein 0.59 0.29 -0.31
19 AT3G54130 Josephin family protein 0.59 0.34 -0.3
20 AT1G49880 Erv1/Alr family protein AtErv1, EMBRYO DEFECTIVE 3106,
Erv1		 0.59 0.32 -0.3
21 AT3G43080 transposable element gene -0.58 0.3 -0.31
22 AT2G44730 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 0.58 0.32 -0.32
23 AT5G55190 RAN GTPase 3 RAN GTPASE 3, RAN GTPase 3 0.58 0.29 -0.31
24 AT5G53870 early nodulin-like protein 1 AtENODL1, early nodulin-like
protein 1		 -0.58 0.33 -0.31
25 AT5G35130 transposable element gene 0.57 0.31 -0.31
26 AT4G32010 HSI2-like 1 HSI2-L1, HSI2-like 1,
VP1/ABI3-LIKE 2		 -0.57 0.3 -0.32
27 AT1G27550 F-box family protein 0.56 0.3 -0.3
28 AT3G60410 Protein of unknown function (DUF1639) 0.55 0.3 -0.32
29 AT3G06020 Protein of unknown function (DUF3049) FANTASTIC FOUR 4 0.55 0.33 -0.33
30 AT4G31950 cytochrome P450, family 82, subfamily C, polypeptide 3 cytochrome P450, family 82,
subfamily C, polypeptide 3		 -0.54 0.3 -0.3
31 AT1G02980 cullin 2 ATCUL2, cullin 2 -0.54 0.31 -0.3
32 AT5G67090 Subtilisin-like serine endopeptidase family protein -0.54 0.32 -0.31
33 AT2G03190 SKP1-like 16 SKP1-like 16, SKP1-like 16 -0.52 0.31 -0.3
34 AT5G20390 Glycosyl hydrolase superfamily protein -0.52 0.31 -0.31
35 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER -0.52 0.32 -0.31
36 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.52 0.31 -0.32
37 AT1G34580 Major facilitator superfamily protein -0.52 0.32 -0.29
38 AT1G72270 CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis
N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G27010.1); Has
772 Blast hits to 657 proteins in 120 species: Archae - 0;
Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322;
Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).		 -0.51 0.29 -0.33
39 AT1G04645 Plant self-incompatibility protein S1 family -0.49 0.31 -0.3
40 AT2G31035 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol
binding protein)-related protein 1B (TAIR:AT2G31030.1); Has
7 Blast hits to 7 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.49 0.29 -0.33
41 AT5G38310 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.49 0.32 -0.33
42 AT3G43150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G11010.1); Has 34 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.49 0.32 -0.32
43 AT3G08900 reversibly glycosylated polypeptide 3 RGP, reversibly glycosylated
polypeptide 3		 -0.48 0.3 -0.31
44 AT1G33420 RING/FYVE/PHD zinc finger superfamily protein -0.47 0.32 -0.33
45 C0021 ND:::GC-TOF/MS 1-Aminocyclopropane-1-carboxylic
acid, -,
1-Aminocyclopropane-1-carboxylate		 -0.47 0.46 -0.45
46 AT1G05040 BEST Arabidopsis thaliana protein match is:
Ubiquitin-associated (UBA) protein (TAIR:AT2G33010.1); Has
14 Blast hits to 12 proteins in 3 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.45 0.33 -0.33
47 AT5G47330 alpha/beta-Hydrolases superfamily protein -0.45 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
48 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.74 0.46 -0.47 C0136
49 C0230 Rutin - - polyphenol biosynthesis -0.69 0.46 -0.43
50 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.62 0.46 -0.45 C0035