AT3G57820 : -
Query Information
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AGICode AT3G57820
Description 60S ribosomal protein L21 (RPL21F), pseudogene, 60S RIBOSOMAL PROTEIN L21 - Arabidopsis thaliana, SWISSPROT:RL21_ARATH; blastp match of 75% identity and 2.5e-15 P-value to GP|3885884|gb|AAC78102.1||AF093630 60S ribosomal protein L21 {Oryza sativa}
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G57820 60S ribosomal protein L21 (RPL21F), pseudogene, 60S
RIBOSOMAL PROTEIN L21 - Arabidopsis thaliana,
SWISSPROT:RL21_ARATH; blastp match of 75% identity and
2.5e-15 P-value to GP|3885884|gb|AAC78102.1||AF093630 60S
ribosomal protein L21 {Oryza sativa}		 1 0.34 -0.31
2 AT5G25370 phospholipase D alpha 3 phospholipase D alpha 3 0.73 0.28 -0.31
3 AT3G20580 COBRA-like protein 10 precursor COBRA-like protein 10 precursor 0.71 0.32 -0.32
4 AT1G23910 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.67 0.3 -0.31
5 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.67 0.31 -0.34
6 AT1G52840 transposable element gene 0.66 0.35 -0.34
7 AT5G49945 Protein of unknown function (DUF1682) 0.66 0.34 -0.29
8 AT1G23880 NHL domain-containing protein -0.66 0.33 -0.36
9 AT1G52660 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.33 -0.3
10 AT3G53590 Leucine-rich repeat protein kinase family protein 0.66 0.32 -0.31
11 AT2G30925 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.32 -0.32
12 AT4G07530 transposable element gene 0.64 0.3 -0.3
13 AT1G61430 S-locus lectin protein kinase family protein 0.64 0.3 -0.31
14 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 0.64 0.31 -0.31
15 AT4G22640 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.63 0.33 -0.32
16 AT5G65780 branched-chain amino acid aminotransferase 5 /
branched-chain amino acid transaminase 5 (BCAT5)		 ATBCAT-5 0.63 0.32 -0.3
17 AT3G44560 fatty acid reductase 8 fatty acid reductase 8 -0.63 0.33 -0.32
18 AT5G11290 Plant protein of unknown function (DUF247) -0.62 0.32 -0.32
19 AT4G10780 LRR and NB-ARC domains-containing disease resistance
protein		 0.62 0.32 -0.3
20 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 0.62 0.34 -0.32
21 AT4G14815 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.62 0.31 -0.31
22 AT5G49290 receptor like protein 56 receptor like protein 56, receptor
like protein 56		 -0.61 0.33 -0.32
23 AT1G36910 transposable element gene 0.61 0.33 -0.34
24 AT5G47560 tonoplast dicarboxylate transporter ATSDAT, TONOPLAST DICARBOXYLATE
TRANSPORTER, tonoplast
dicarboxylate transporter		 -0.6 0.32 -0.34
25 AT5G55900 Sucrase/ferredoxin-like family protein -0.6 0.32 -0.32
26 AT1G78440 Arabidopsis thaliana gibberellin 2-oxidase 1 Arabidopsis thaliana gibberellin
2-oxidase 1, gibberellin 2-oxidase
1		 0.6 0.32 -0.3
27 AT5G16320 FRIGIDA like 1 FRIGIDA like 1 0.6 0.33 -0.34
28 AT2G16190 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13;
Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.31 -0.32
29 AT4G23090 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.31
30 AT5G28040 DNA-binding storekeeper protein-related transcriptional
regulator		 0.6 0.32 -0.34
31 AT5G14850 Alg9-like mannosyltransferase family 0.6 0.33 -0.32
32 AT4G08340 transposable element gene 0.6 0.36 -0.3
33 AT4G30410 sequence-specific DNA binding transcription factors 0.59 0.32 -0.3
34 AT3G56700 fatty acid reductase 6 AtFAR6, fatty acid reductase 6 0.59 0.31 -0.29
35 AT4G32700 helicases;ATP-dependent helicases;nucleic acid binding;ATP
binding;DNA-directed DNA polymerases;DNA binding		 TEBICHI -0.59 0.31 -0.29
36 AT5G07710 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.59 0.32 -0.3
37 AT5G15060 Lateral organ boundaries (LOB) domain family protein 0.59 0.31 -0.34
38 AT1G46696 Protein of unknown function, DUF601 0.59 0.32 -0.32
39 AT2G37880 Protein of unknown function, DUF617 -0.59 0.3 -0.32
40 AT3G02670 Glycine-rich protein family 0.58 0.32 -0.33
41 AT1G78710 TRICHOME BIREFRINGENCE-LIKE 42 TRICHOME BIREFRINGENCE-LIKE 42 -0.58 0.3 -0.32
42 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.34 -0.34
43 AT3G43130 transposable element gene -0.58 0.32 -0.32
44 AT3G09735 S1FA-like DNA-binding protein 0.58 0.32 -0.33
45 AT1G64030 serpin 3 ATSRP3, serpin 3 0.58 0.32 -0.32
46 AT1G30100 nine-cis-epoxycarotenoid dioxygenase 5 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 5,
nine-cis-epoxycarotenoid
dioxygenase 5		 -0.58 0.3 -0.32
47 AT4G12840 Protein of unknown function (DUF707) 0.58 0.31 -0.3
48 AT1G48270 G-protein-coupled receptor 1 G-protein-coupled receptor 1 0.57 0.29 -0.31
49 AT4G30570 Glucose-1-phosphate adenylyltransferase family protein -0.57 0.32 -0.3
50 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.57 0.32 -0.3
51 AT5G25270 Ubiquitin-like superfamily protein -0.57 0.31 -0.33
52 AT1G22130 AGAMOUS-like 104 AGAMOUS-like 104 0.57 0.3 -0.32
53 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.57 0.33 -0.32
54 AT1G71990 fucosyltransferase 13 ARABIDOPSIS FUCOSYLTRANSFERASE 4,
ATFUT13, FT4-M, FUCTC,
fucosyltransferase 13		 -0.56 0.32 -0.32
55 AT1G22830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.3 -0.31
56 AT1G47370 Toll-Interleukin-Resistance (TIR) domain family protein 0.56 0.29 -0.33
57 AT2G04300 Leucine-rich repeat protein kinase family protein 0.56 0.31 -0.33
58 AT2G22520 unknown protein; Has 186 Blast hits to 37 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4;
Plants - 17; Viruses - 0; Other Eukaryotes - 165 (source:
NCBI BLink).		 0.56 0.32 -0.32
59 AT1G16150 wall associated kinase-like 4 wall associated kinase-like 4 0.56 0.3 -0.31
60 AT5G08500 Transmembrane CLPTM1 family protein -0.56 0.32 -0.31
61 AT1G50930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits
to 213 proteins in 63 species: Archae - 0; Bacteria - 2;
Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other
Eukaryotes - 70 (source: NCBI BLink).		 0.56 0.3 -0.35
62 AT2G06500 hAT family dimerisation domain 0.56 0.31 -0.32
63 AT1G70060 SIN3-like 4 SIN3-like 4 0.56 0.31 -0.33
64 AT1G69550 disease resistance protein (TIR-NBS-LRR class) 0.55 0.29 -0.31
65 AT5G24880 BEST Arabidopsis thaliana protein match is:
calmodulin-binding protein-related (TAIR:AT5G10660.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.55 0.32 -0.3
66 AT1G37010 BEST Arabidopsis thaliana protein match is: spindle pole
body component 98 (TAIR:AT5G06680.1); Has 15 Blast hits to
15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 0.55 0.31 -0.31
67 AT4G05140 Nucleoside transporter family protein 0.55 0.33 -0.32
68 AT4G09360 NB-ARC domain-containing disease resistance protein -0.55 0.3 -0.31
69 AT2G24620 S-locus glycoprotein family protein 0.55 0.35 -0.3
70 AT1G36640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell, root; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G36622.1); Has 14 Blast hits to 14 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.55 0.33 -0.32
71 AT4G36940 nicotinate phosphoribosyltransferase 1 nicotinate
phosphoribosyltransferase 1		 -0.54 0.3 -0.3
72 AT5G36080 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32904.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.53 0.3 -0.32
73 AT1G27590 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana
protein match is: phosphatidylinositol 3- and 4-kinase
family protein (TAIR:AT1G27570.1); Has 109 Blast hits to
109 proteins in 38 species: Archae - 0; Bacteria - 0;
Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.53 0.32 -0.31
74 AT5G57790 unknown protein; Has 13 Blast hits to 11 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.3 -0.33
75 AT1G80330 gibberellin 3-oxidase 4 ARABIDOPSIS THALIANA GIBBERELLIN
3-OXIDASE 4, gibberellin 3-oxidase
4		 -0.53 0.33 -0.32
76 AT2G38520 transposable element gene -0.53 0.32 -0.31
77 AT4G36380 Cytochrome P450 superfamily protein ROTUNDIFOLIA 3 -0.53 0.32 -0.32
78 AT3G14030 F-box associated ubiquitination effector family protein -0.52 0.32 -0.31
79 AT4G34640 squalene synthase 1 ERG9, squalene synthase 1 -0.52 0.29 -0.31
80 AT5G64360 Chaperone DnaJ-domain superfamily protein EMF1-Interacting Protein 1 -0.51 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
81 C0085 Digalactosyldiacylglycerol-36:6 - Digalactosyldiacylglycerol-36:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.72 0.5 -0.49 C0085
82 C0208 Phosphatidylinositol-34:2 - Phosphatidylinositol-34:2 3-phosphoinositide biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
sphingolipid biosynthesis,
linoleate biosynthesis I,
cutin biosynthesis,
glycerophosphodiester degradation,
phosphate acquisition,
glutathione redox reactions I 		0.72 0.48 -0.47 C0208
83 C0247 Sulfoquinovosyldiacylglycerol-34:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.7 0.47 -0.49 C0247
84 C0084 Digalactosyldiacylglycerol-36:5 - Digalactosyldiacylglycerol-36:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.67 0.51 -0.48 C0084
85 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.63 0.32 -0.31 C0034
86 C0077 Digalactosyldiacylglycerol-34:2 - Digalactosyldiacylglycerol-34:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.56 0.31 -0.35