AT3G58060 : -
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AGICode AT3G58060
Description Cation efflux family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G58060 Cation efflux family protein 1 0.3 -0.33
2 AT3G53000 phloem protein 2-A15 phloem protein 2-A15, phloem
protein 2-A15
0.69 0.3 -0.3
3 AT5G65910 BSD domain-containing protein 0.69 0.31 -0.3
4 AT5G12990 CLAVATA3/ESR-RELATED 40 CLAVATA3/ESR-RELATED 40 0.69 0.33 -0.31
5 AT1G52470 alpha/beta-Hydrolases superfamily protein 0.69 0.32 -0.31
6 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 0.69 0.34 -0.32
7 AT5G37380 Chaperone DnaJ-domain superfamily protein 0.68 0.3 -0.33
8 AT1G69670 cullin 3B ARABIDOPSIS THALIANA CULLIN 3B,
cullin 3B
0.68 0.28 -0.33
9 AT3G49480 Protein with RNI-like/FBD-like domains 0.68 0.33 -0.32
10 AT5G09690 magnesium transporter 7 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORTER 7, magnesium
transporter 7, MRS2-7
-0.68 0.32 -0.3
11 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.67 0.33 -0.33
12 AT1G27070 5'-AMP-activated protein kinase-related 0.66 0.32 -0.32
13 AT5G27080 Transducin family protein / WD-40 repeat family protein AtCDC20.3, cell division cycle
20.3
-0.66 0.32 -0.32
14 AT1G76670 Nucleotide-sugar transporter family protein 0.66 0.31 -0.31
15 AT5G65540 unknown protein; Has 6825 Blast hits to 3811 proteins in
289 species: Archae - 0; Bacteria - 184; Metazoa - 2139;
Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes -
2874 (source: NCBI BLink).
0.65 0.32 -0.33
16 AT3G09320 DHHC-type zinc finger family protein 0.65 0.31 -0.31
17 AT4G01190 phosphatidylinositol phosphate kinase 10 phosphatidylinositol phosphate
kinase 10, phosphatidylinositol
phosphate kinase 10
-0.65 0.31 -0.31
18 AT3G03580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.34 -0.31
19 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.65 0.29 -0.3
20 AT3G07450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
0.64 0.32 -0.32
21 AT3G33064 transposable element gene 0.64 0.32 -0.3
22 AT5G66200 armadillo repeat only 2 armadillo repeat only 2 0.64 0.31 -0.32
23 AT3G46750 unknown protein; Has 2631 Blast hits to 1984 proteins in
271 species: Archae - 6; Bacteria - 163; Metazoa - 1232;
Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes -
828 (source: NCBI BLink).
0.64 0.31 -0.33
24 ATMG01240 hypothetical protein ORF100C 0.63 0.33 -0.33
25 AT2G23040 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.62 0.33 -0.3
26 AT5G56450 Mitochondrial substrate carrier family protein PM-ANT 0.62 0.32 -0.35
27 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 0.62 0.33 -0.31
28 AT1G06450 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein
0.62 0.31 -0.35
29 AT3G57050 cystathionine beta-lyase cystathionine beta-lyase -0.61 0.32 -0.3
30 AT1G62800 aspartate aminotransferase 4 aspartate aminotransferase 4 -0.61 0.29 -0.3
31 AT4G04300 transposable element gene 0.61 0.32 -0.32
32 AT1G68560 alpha-xylosidase 1 ALPHA-XYLOSIDASE 1, altered
xyloglucan 3, thermoinhibition
resistant germination 1,
alpha-xylosidase 1
0.61 0.29 -0.33
33 AT1G55530 RING/U-box superfamily protein 0.61 0.29 -0.31
34 AT4G29980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: leaf whorl, sepal, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; BEST Arabidopsis
thaliana protein match is: Fasciclin-like arabinogalactan
family protein (TAIR:AT1G30800.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).
0.61 0.3 -0.31
35 AT3G17900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 45
Blast hits to 44 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).
0.61 0.3 -0.29
36 AT3G24050 GATA transcription factor 1 GATA transcription factor 1 0.6 0.32 -0.31
37 AT3G48480 Cysteine proteinases superfamily protein -0.6 0.32 -0.32
38 AT5G57570 GCK domain-containing protein 0.59 0.33 -0.31
39 AT2G19400 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein
-0.59 0.29 -0.33
40 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 0.59 0.29 -0.32
41 AT2G12230 pseudogene, C-1-tetrahydrofolate synthase, blastp match of
91% identity and 2.9e-07 P-value to
GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel
protein similar to methylenetetrahydrofolate dehydrogenase
(NADP+ dependent), methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC
3.5.4.9, EC-TRUNCATED-
-0.59 0.33 -0.32
42 AT5G46460 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.31 -0.33
43 AT4G05140 Nucleoside transporter family protein 0.58 0.32 -0.32
44 AT3G23750 Leucine-rich repeat protein kinase family protein 0.58 0.34 -0.32
45 AT2G14420 transposable element gene -0.57 0.3 -0.3
46 AT1G74110 cytochrome P450, family 78, subfamily A, polypeptide 10 cytochrome P450, family 78,
subfamily A, polypeptide 10
-0.57 0.31 -0.32
47 AT1G43840 transposable element gene 0.57 0.32 -0.31
48 AT5G02650 BEST Arabidopsis thaliana protein match is: Telomerase
activating protein Est1 (TAIR:AT1G28260.2); Has 20 Blast
hits to 20 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.57 0.33 -0.31
49 AT3G45510 RING/U-box protein 0.57 0.32 -0.31
50 AT4G17020 transcription factor-related -0.57 0.33 -0.31
51 AT3G03020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.57 0.32 -0.31
52 AT1G27160 valyl-tRNA synthetase / valine--tRNA ligase-related 0.56 0.33 -0.31
53 AT2G06220 transposable element gene 0.56 0.29 -0.34
54 AT5G63740 RING/U-box superfamily protein 0.56 0.32 -0.3
55 AT5G18410 transcription activators ATSRA1, KLUNKER, PIROGI, PIROGI
121, PIRP, SRA1
0.56 0.32 -0.32
56 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
0.56 0.31 -0.31
57 AT2G18470 roline-rich extensin-like receptor kinase 4 proline-rich extensin-like
receptor kinase 4, proline-rich
extensin-like receptor kinase 4
-0.56 0.32 -0.33
58 AT1G49850 RING/U-box superfamily protein 0.56 0.31 -0.32
59 AT1G08170 Histone superfamily protein 0.56 0.32 -0.31
60 AT1G50160 BEST Arabidopsis thaliana protein match is: Polynucleotidyl
transferase, ribonuclease H-like superfamily protein
(TAIR:AT2G04420.1); Has 34 Blast hits to 34 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.56 0.3 -0.31
61 AT2G02960 RING/FYVE/PHD zinc finger superfamily protein -0.55 0.3 -0.31
62 AT2G22160 Cysteine proteinases superfamily protein -0.54 0.3 -0.31
63 AT5G38870 transposable element gene -0.53 0.32 -0.31
64 AT4G07380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
-0.53 0.32 -0.32
65 AT4G02160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61710.1); Has 35 Blast hits
to 35 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.53 0.33 -0.32
66 AT1G60530 Dynamin related protein 4A Dynamin related protein 4A -0.53 0.33 -0.34
67 AT1G61680 terpene synthase 14 TERPENE SYNTHASE 14, terpene
synthase 14
-0.52 0.33 -0.31
68 AT1G72000 Plant neutral invertase family protein alkaline/neutral invertase F -0.52 0.31 -0.33
69 AT1G11690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G20350.1); Has 5959 Blast hits
to 4807 proteins in 476 species: Archae - 156; Bacteria -
436; Metazoa - 2789; Fungi - 309; Plants - 336; Viruses -
9; Other Eukaryotes - 1924 (source: NCBI BLink).
-0.51 0.32 -0.31
70 AT5G37090 transposable element gene -0.51 0.32 -0.32
71 AT1G47885 Ribonuclease inhibitor -0.51 0.32 -0.31
72 AT4G12220 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT4G12210.1); Has 24 Blast hits
to 21 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.5 0.3 -0.32
73 AT1G22090 Protein of unknown function (DUF626) embryo defective 2204 -0.5 0.31 -0.31
74 AT2G02250 phloem protein 2-B2 phloem protein 2-B2, phloem
protein 2-B2
-0.49 0.32 -0.33
75 AT5G63750 RING/U-box superfamily protein ARIADNE 13, ARABIDOPSIS ARIADNE 13 -0.49 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
76 C0214 PR_MST_2412.1 - - - 0.81 0.42 -0.44
77 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis
0.8 0.45 -0.44 C0001
78 C0215 PR_MST_2527.1 - - - 0.79 0.43 -0.45
79 C0144 Maltose D-Maltose α-Maltose starch degradation II 0.76 0.45 -0.41 C0144
80 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation
0.75 0.45 -0.46 C0012
81 C0173 MST_2301.7 - - - 0.73 0.43 -0.46
82 C0074 Cystine L-Cystine L-Cystine protein precursor 0.71 0.47 -0.46 C0074
83 C0213 PR_MST_2410.2 - - - 0.7 0.43 -0.47
84 C0086 Disinapylspermidine - - - 0.68 0.42 -0.44
85 C0139 Linoleic acid n-cis,cis-9,12-Octadecadienoic acid Linoleate poly-hydroxy fatty acids biosynthesis,
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
crepenynic acid biosynthesis
0.59 0.3 -0.31 C0139
86 C0058 Arginine D,L-Arginine L-Arginine arginine degradation VI (arginase 2 pathway),
arginine degradation I (arginase pathway),
arginine biosynthesis I,
putrescine biosynthesis II,
nitric oxide biosynthesis I (in plants),
citrulline biosynthesis,
putrescine biosynthesis I,
tRNA charging,
arginine biosynthesis II (acetyl cycle),
citrulline-nitric oxide cycle,
urea cycle,
L-Ndelta-acetylornithine biosynthesis
-0.53 0.32 -0.3 C0058