AT3G57040 : response regulator 9
Query Information
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AGICode AT3G57040
Description response regulator 9
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G57040 response regulator 9 response regulator 9, RESPONSE
REGULATOR 4		 1 0.3 -0.31
2 AT3G05970 long-chain acyl-CoA synthetase 6 ATLACS6, long-chain acyl-CoA
synthetase 6		 -0.86 0.32 -0.31
3 AT2G18300 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.86 0.31 -0.33
4 AT4G02940 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.84 0.33 -0.31
5 AT4G36540 BR enhanced expression 2 BR enhanced expression 2 0.83 0.32 -0.31
6 AT1G76520 Auxin efflux carrier family protein -0.82 0.3 -0.33
7 AT3G13110 serine acetyltransferase 2;2 serine acetyltransferase 2;2,
SERINE ACETYLTRANSFERASE-1, SERINE
ACETYLTRANSFERASE A, SERINE
ACETYLTRANSFERASE-MITOCHONDRIAL,
SERINE ACETYLTRANSFERASE 3, serine
acetyltransferase 2;2		 -0.82 0.29 -0.33
8 AT2G43000 NAC domain containing protein 42 NAC domain containing protein 42,
NAC domain containing protein 42		 -0.82 0.32 -0.33
9 AT3G14205 Phosphoinositide phosphatase family protein -0.82 0.31 -0.31
10 AT5G51070 Clp ATPase CLPD, EARLY RESPONSIVE TO
DEHYDRATION 1, SENESCENCE
ASSOCIATED GENE 15		 -0.82 0.31 -0.31
11 AT5G33290 xylogalacturonan deficient 1 xylogalacturonan deficient 1 -0.82 0.33 -0.31
12 AT3G07700 Protein kinase superfamily protein -0.82 0.33 -0.3
13 AT3G21690 MATE efflux family protein -0.81 0.31 -0.3
14 AT3G13910 Protein of unknown function (DUF3511) -0.81 0.3 -0.29
15 AT3G05100 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.81 0.31 -0.31
16 AT5G13750 zinc induced facilitator-like 1 zinc induced facilitator-like 1 -0.81 0.28 -0.31
17 AT5G04020 calmodulin binding -0.81 0.3 -0.31
18 AT1G52190 Major facilitator superfamily protein 0.81 0.3 -0.31
19 AT1G69930 glutathione S-transferase TAU 11 glutathione S-transferase TAU 11,
glutathione S-transferase TAU 11		 -0.81 0.3 -0.31
20 AT3G01410 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.8 0.31 -0.32
21 AT3G20865 arabinogalactan protein 40 arabinogalactan protein 40 0.8 0.33 -0.31
22 AT5G48410 glutamate receptor 1.3 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 1.3, glutamate receptor
1.3		 -0.8 0.32 -0.31
23 AT2G38120 Transmembrane amino acid transporter family protein AUXIN RESISTANT 1, MODIFIER OF
ARF7/NPH4 PHENOTYPES 1, PIR1, WAVY
ROOTS 5		 0.8 0.31 -0.3
24 AT3G16240 delta tonoplast integral protein AQP1, ATTIP2;1, delta tonoplast
integral protein, DELTA-TIP1,
TIP2;1		 0.8 0.32 -0.31
25 AT1G15520 pleiotropic drug resistance 12 ATP-binding cassette G40,
Arabidopsis thaliana ATP-binding
cassette G40, PLEIOTROPIC DRUG
RESISTANCE 12, pleiotropic drug
resistance 12		 -0.8 0.32 -0.31
26 AT5G39040 transporter associated with antigen processing protein 2 ATP-binding cassette B27, ALUMINUM
SENSITIVE 1, AtALS1, ARABIDOPSIS
THALIANA TRANSPORTER ASSOCIATED
WITH ANTIGEN PROCESSING PROTEIN 2,
transporter associated with
antigen processing protein 2		 -0.79 0.32 -0.32
27 AT1G10470 response regulator 4 response regulator 4, RESPONCE
REGULATOR 1, INDUCED BY CYTOKININ
7, maternal effect embryo arrest 7		 0.79 0.32 -0.32
28 AT4G36640 Sec14p-like phosphatidylinositol transfer family protein -0.79 0.32 -0.32
29 AT3G25010 receptor like protein 41 receptor like protein 41, receptor
like protein 41		 -0.78 0.32 -0.35
30 AT5G13320 Auxin-responsive GH3 family protein GH3-LIKE DEFENSE GENE 1, GRETCHEN
HAGEN 3.12, AVRPPHB SUSCEPTIBLE 3,
HOPW1-1-INTERACTING 3		 -0.78 0.31 -0.33
31 AT1G51820 Leucine-rich repeat protein kinase family protein -0.78 0.32 -0.31
32 AT5G09470 dicarboxylate carrier 3 dicarboxylate carrier 3 -0.78 0.32 -0.32
33 AT3G59140 multidrug resistance-associated protein 14 ATP-binding cassette C10,
multidrug resistance-associated
protein 14, multidrug
resistance-associated protein 14		 -0.78 0.34 -0.32
34 AT1G32940 Subtilase family protein ATSBT3.5, SBT3.5 -0.78 0.31 -0.32
35 AT2G47800 multidrug resistance-associated protein 4 ATP-binding cassette C4, multidrug
resistance-associated protein 4,
EST3, multidrug
resistance-associated protein 4		 -0.78 0.32 -0.31
36 AT5G16450 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.78 0.32 -0.32
37 AT5G25930 Protein kinase family protein with leucine-rich repeat
domain		 -0.78 0.31 -0.3
38 AT3G55470 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.78 0.31 -0.3
39 AT2G34660 multidrug resistance-associated protein 2 ATP-binding cassette C2,
Arabidopsis thaliana ATP-binding
cassette C2, multidrug
resistance-associated protein 2,
EST4, multidrug
resistance-associated protein 2		 -0.78 0.32 -0.31
40 AT1G69450 Early-responsive to dehydration stress protein (ERD4) -0.78 0.32 -0.33
41 AT2G15760 Protein of unknown function (DUF1645) -0.78 0.31 -0.32
42 AT5G61450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.78 0.34 -0.33
43 AT3G57030 Calcium-dependent phosphotriesterase superfamily protein 0.78 0.31 -0.33
44 AT4G29380 protein kinase family protein / WD-40 repeat family protein Arabidopsis thaliana vacuolar
protein sorting 15, vacuolar
protein sorting 15		 -0.77 0.32 -0.3
45 AT5G24810 ABC1 family protein -0.77 0.3 -0.31
46 AT2G17790 VPS35 homolog A VPS35 homolog A, ZIG suppressor 3 -0.77 0.32 -0.3
47 AT3G56200 Transmembrane amino acid transporter family protein -0.77 0.32 -0.31
48 AT5G04930 aminophospholipid ATPase 1 aminophospholipid ATPase 1 -0.77 0.28 -0.31
49 AT3G26600 armadillo repeat only 4 armadillo repeat only 4 -0.77 0.33 -0.31
50 AT2G26780 ARM repeat superfamily protein -0.77 0.32 -0.3
51 AT2G24290 Protein of unknown function (DUF1068) 0.77 0.32 -0.3
52 AT2G34070 TRICHOME BIREFRINGENCE-LIKE 37 TRICHOME BIREFRINGENCE-LIKE 37 -0.77 0.32 -0.3
53 AT5G01390 DNAJ heat shock family protein 0.77 0.33 -0.33
54 AT3G05360 receptor like protein 30 receptor like protein 30, receptor
like protein 30		 -0.77 0.3 -0.32
55 AT2G05990 NAD(P)-binding Rossmann-fold superfamily protein ENOYL-ACP REDUCTASE 1, MOSAIC
DEATH 1		 0.77 0.3 -0.33
56 AT4G34760 SAUR-like auxin-responsive protein family 0.77 0.32 -0.31
57 AT4G12300 cytochrome P450, family 706, subfamily A, polypeptide 4 cytochrome P450, family 706,
subfamily A, polypeptide 4		 -0.77 0.33 -0.34
58 AT5G22390 Protein of unknown function (DUF3049) 0.77 0.3 -0.32
59 AT3G23790 AMP-dependent synthetase and ligase family protein acyl activating enzyme 16 -0.77 0.3 -0.32
60 AT5G51560 Leucine-rich repeat protein kinase family protein 0.76 0.31 -0.33
61 AT1G77920 bZIP transcription factor family protein -0.76 0.31 -0.29
62 AT5G57780 EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12
growth stages; BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in
11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 P1R1 0.76 0.32 -0.34
63 AT4G37990 elicitor-activated gene 3-2 ARABIDOPSIS THALIANA
CINNAMYL-ALCOHOL DEHYDROGENASE 8,
CINNAMYL-ALCOHOL DEHYDROGENASE B2,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-2		 -0.76 0.3 -0.32
64 AT1G70810 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.76 0.3 -0.3
65 AT4G16660 heat shock protein 70 (Hsp 70) family protein -0.76 0.32 -0.31
66 AT3G08030 Protein of unknown function, DUF642 0.76 0.31 -0.32
67 AT3G08990 Yippee family putative zinc-binding protein -0.76 0.33 -0.29
68 AT1G13340 Regulator of Vps4 activity in the MVB pathway protein -0.76 0.32 -0.31
69 AT5G65750 2-oxoglutarate dehydrogenase, E1 component -0.76 0.35 -0.34
70 AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ATBSMT1, BSMT1 -0.76 0.3 -0.33
71 AT3G12740 ALA-interacting subunit 1 ALA-interacting subunit 1 -0.76 0.3 -0.32
72 AT1G30400 multidrug resistance-associated protein 1 ATP-binding cassette C1,
Arabidopsis thaliana ATP-binding
cassette C1, ARABIDOPSIS THALIANA
MULTIDRUG RESISTANCE-ASSOCIATED
PROTEIN 1, EST1, multidrug
resistance-associated protein 1		 -0.76 0.3 -0.33
73 AT5G40210 nodulin MtN21 /EamA-like transporter family protein -0.76 0.33 -0.31
74 AT2G14620 xyloglucan endotransglucosylase/hydrolase 10 xyloglucan
endotransglucosylase/hydrolase 10		 -0.76 0.33 -0.33
75 AT1G19050 response regulator 7 response regulator 7 0.76 0.32 -0.31
76 AT1G33110 MATE efflux family protein -0.76 0.32 -0.31
77 AT1G02640 beta-xylosidase 2 BETA-XYLOSIDASE 2, beta-xylosidase
2		 0.76 0.33 -0.33
78 AT5G55070 Dihydrolipoamide succinyltransferase -0.76 0.33 -0.31
79 AT1G04780 Ankyrin repeat family protein -0.76 0.3 -0.31
80 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 -0.76 0.32 -0.31
81 AT5G62920 response regulator 6 response regulator 6 0.76 0.31 -0.33
82 AT5G43700 AUX/IAA transcriptional regulator family protein AUXIN INDUCIBLE 2-11,
indole-3-acetic acid inducible 4		 0.75 0.3 -0.32
83 AT5G58960 Plant protein of unknown function (DUF641) GRAVITROPIC IN THE LIGHT 0.75 0.33 -0.31
84 AT3G22370 alternative oxidase 1A alternative oxidase 1A, ATAOX1A,
AtHSR3, hyper-sensitivity-related
3		 -0.75 0.32 -0.31
85 AT3G19970 alpha/beta-Hydrolases superfamily protein -0.75 0.3 -0.3
86 AT1G64900 cytochrome P450, family 89, subfamily A, polypeptide 2 CYP89, cytochrome P450, family 89,
subfamily A, polypeptide 2		 -0.75 0.33 -0.33
87 AT1G66230 myb domain protein 20 myb domain protein 20, myb domain
protein 20		 0.75 0.32 -0.32
88 AT1G71140 MATE efflux family protein -0.75 0.32 -0.33
89 AT3G55640 Mitochondrial substrate carrier family protein -0.75 0.31 -0.32
90 AT2G15090 3-ketoacyl-CoA synthase 8 3-ketoacyl-CoA synthase 8 0.75 0.31 -0.34
91 AT4G34710 arginine decarboxylase 2 arginine decarboxylase 2, ATADC2,
SPE2		 -0.75 0.32 -0.31
92 AT3G21250 multidrug resistance-associated protein 6 ATP-binding cassette C8,
ARABIDOPSIS THALIANA MULTIDRUG
RESISTANCE-ASSOCIATED PROTEIN 6,
multidrug resistance-associated
protein 6		 -0.75 0.32 -0.31
93 AT5G51910 TCP family transcription factor 0.75 0.29 -0.31
94 AT2G29350 senescence-associated gene 13 senescence-associated gene 13 -0.75 0.31 -0.32
95 AT1G66390 myb domain protein 90 ATMYB90, myb domain protein 90,
PRODUCTION OF ANTHOCYANIN PIGMENT
2		 -0.75 0.3 -0.32
96 AT1G79500 Aldolase-type TIM barrel family protein AtkdsA1 0.75 0.32 -0.32
97 AT5G57150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.75 0.31 -0.31
98 AT1G09390 GDSL-like Lipase/Acylhydrolase superfamily protein 0.75 0.32 -0.32
99 AT3G26520 tonoplast intrinsic protein 2 GAMMA-TIP2, SALT-STRESS INDUCIBLE
TONOPLAST INTRINSIC PROTEIN,
TIP1;2, tonoplast intrinsic
protein 2		 0.75 0.32 -0.31
100 AT5G04540 Myotubularin-like phosphatases II superfamily -0.75 0.32 -0.3
101 AT5G48900 Pectin lyase-like superfamily protein 0.74 0.33 -0.31
102 AT3G50770 calmodulin-like 41 calmodulin-like 41 -0.74 0.29 -0.32
103 AT5G49100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G06868.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.74 0.34 -0.3
104 AT1G61120 terpene synthase 04 GERANYLLINALOOL SYNTHASE, terpene
synthase 04, TERPENE SYNTHASE 4		 -0.74 0.33 -0.32
105 AT5G20280 sucrose phosphate synthase 1F sucrose phosphate synthase 1F,
sucrose phosphate synthase 1F,
sucrose-phosphate synthase A1		 -0.74 0.32 -0.3
106 AT5G52810 NAD(P)-binding Rossmann-fold superfamily protein -0.74 0.33 -0.33
107 AT4G25570 Cytochrome b561/ferric reductase transmembrane protein
family		 ACYB-2 0.74 0.29 -0.31
108 AT3G12800 short-chain dehydrogenase-reductase B DECR, short-chain
dehydrogenase-reductase B		 -0.74 0.31 -0.31
109 AT3G24982 receptor like protein 40 receptor like protein 40, receptor
like protein 40		 -0.74 0.33 -0.34
110 AT4G30330 Small nuclear ribonucleoprotein family protein 0.74 0.31 -0.32
111 AT5G17620 CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1
(InterPro:IPR010604); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.74 0.33 -0.33
112 AT1G28480 Thioredoxin superfamily protein GRX480, roxy19 -0.74 0.31 -0.31
113 AT3G50910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66480.1); Has 76 Blast hits
to 75 proteins in 28 species: Archae - 0; Bacteria - 10;
Metazoa - 7; Fungi - 2; Plants - 49; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 -0.74 0.3 -0.31
114 AT3G13330 proteasome activating protein 200 proteasome activating protein 200 -0.74 0.33 -0.31
115 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 -0.73 0.35 -0.34
116 AT1G59730 thioredoxin H-type 7 thioredoxin H-type 7, thioredoxin
H-type 7		 -0.73 0.31 -0.33
117 AT1G72820 Mitochondrial substrate carrier family protein 0.73 0.3 -0.31
118 AT4G25640 detoxifying efflux carrier 35 detoxifying efflux carrier 35,
detoxifying efflux carrier 35,
FLOWER FLAVONOID TRANSPORTER		 -0.73 0.3 -0.33
119 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 -0.73 0.32 -0.31
120 AT1G63010 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1)
domain-containing protein		 -0.73 0.34 -0.34
121 AT3G07510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits
to 133 proteins in 14 species: Archae - 0; Bacteria - 4;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.32 -0.31
122 AT4G39850 peroxisomal ABC transporter 1 ATP-binding cassette D1, acetate
non-utilizing 2, Arabidopsis
thaliana ATP-binding cassette D1,
COMATOSE, PEROXISOME DEFECTIVE 3,
peroxisomal ABC transporter 1		 -0.73 0.32 -0.33
123 AT1G55080 MED9; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757
proteins in 1293 species: Archae - 12; Bacteria - 4374;
Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses -
273; Other Eukaryotes - 24337 (source: NCBI BLink).		 MED9 -0.73 0.32 -0.33
124 AT1G55630 Pentatricopeptide repeat (PPR) superfamily protein 0.73 0.31 -0.28
125 AT5G52430 hydroxyproline-rich glycoprotein family protein -0.73 0.31 -0.31
126 AT1G80630 RNI-like superfamily protein 0.72 0.29 -0.32
127 AT5G18600 Thioredoxin superfamily protein 0.72 0.3 -0.32
128 AT4G35020 RAC-like 3 RAC-like 3, ATROP6, RAC-like 3,
RHO1PS, RHO-RELATED PROTEIN FROM
PLANTS 6		 0.72 0.34 -0.31
129 AT1G48780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G18300.1); Has 89 Blast hits
to 89 proteins in 11 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.72 0.32 -0.34
130 AT3G28860 ATP binding cassette subfamily B19 ATP-binding cassette B19,
Arabidopsis thaliana ATP-binding
cassette B19, ATMDR1, MULTIDRUG
RESISTANCE PROTEIN 11, ATPGP19,
MDR1, MDR11, P-GLYCOPROTEIN 19		 0.71 0.33 -0.31
131 AT5G20885 RING/U-box superfamily protein 0.71 0.32 -0.33
132 AT1G56220 Dormancy/auxin associated family protein 0.71 0.33 -0.32