AT3G57060 : -
Query Information
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AGICode AT3G57060
Description binding
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G57060 binding 1 0.31 -0.3
2 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 0.69 0.33 -0.31
3 AT1G52600 Peptidase S24/S26A/S26B/S26C family protein -0.61 0.31 -0.3
4 AT1G03550 Secretory carrier membrane protein (SCAMP) family protein 0.59 0.33 -0.31
5 AT3G60980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.29 -0.34
6 AT5G40640 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 7 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.56 0.31 -0.31
7 AT1G04150 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.56 0.31 -0.3
8 AT2G02180 tobamovirus multiplication protein 3 tobamovirus multiplication protein
3		 -0.56 0.31 -0.31
9 AT1G67800 Copine (Calcium-dependent phospholipid-binding protein)
family		 -0.56 0.32 -0.32
10 AT4G09110 RING/U-box superfamily protein 0.56 0.32 -0.3
11 AT4G05230 Ubiquitin-like superfamily protein 0.55 0.31 -0.31
12 AT3G02240 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 7 -0.55 0.29 -0.31
13 AT1G70570 anthranilate phosphoribosyltransferase, putative -0.54 0.33 -0.32
14 AT2G13680 callose synthase 5 ARABIDOPSIS THALIANA GLUCAN
SYNTHASE-LIKE 2, callose synthase
5, GLUCAN SYNTHASE-LIKE 2		 -0.54 0.33 -0.32
15 AT1G05370 Sec14p-like phosphatidylinositol transfer family protein 0.54 0.32 -0.32
16 AT4G02380 senescence-associated gene 21 Arabidopsis thaliana late
embryogenensis abundant like 5,
senescence-associated gene 21		 -0.53 0.32 -0.31
17 AT3G06570 Galactose oxidase/kelch repeat superfamily protein -0.53 0.3 -0.3
18 AT1G57650 ATP binding 0.52 0.31 -0.32
19 AT3G28780 Protein of unknown function (DUF1216) 0.52 0.33 -0.32
20 AT5G51200 Protein of unknown function (DUF3414) EMBRYO DEFECTIVE 3142 0.52 0.31 -0.32
21 AT4G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G35658.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.51 0.3 -0.3
22 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 -0.51 0.33 -0.33
23 AT2G24330 Protein of unknown function (DUF2296) -0.51 0.31 -0.32
24 AT1G21780 BTB/POZ domain-containing protein -0.51 0.33 -0.32
25 AT4G01380 plastocyanin-like domain-containing protein 0.51 0.3 -0.33
26 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-3, OEP16-3 -0.5 0.32 -0.32
27 AT5G47470 Nodulin MtN21 /EamA-like transporter family protein 0.5 0.32 -0.34
28 AT3G30640 transposable element gene -0.49 0.33 -0.31
29 AT5G12910 Histone superfamily protein 0.49 0.28 -0.32
30 AT3G28580 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.49 0.31 -0.34
31 AT5G51850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G62170.1); Has 384 Blast hits
to 375 proteins in 79 species: Archae - 0; Bacteria - 14;
Metazoa - 135; Fungi - 31; Plants - 92; Viruses - 0; Other
Eukaryotes - 112 (source: NCBI BLink).		 0.49 0.32 -0.31
32 AT3G43650 transposable element gene 0.49 0.32 -0.3
33 AT1G62360 KNOX/ELK homeobox transcription factor BUMBERSHOOT, BUMBERSHOOT 1,
SHOOTLESS, SHOOT MERISTEMLESS,
WALDMEISTER, WALDMEISTER 1		 0.48 0.3 -0.3
34 AT2G13660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.48 0.33 -0.32
35 AT5G63740 RING/U-box superfamily protein 0.47 0.31 -0.32
36 AT4G19510 Disease resistance protein (TIR-NBS-LRR class) -0.47 0.31 -0.33
37 AT2G21550 Bifunctional dihydrofolate reductase/thymidylate synthase 0.47 0.33 -0.34
38 AT1G35480 transposable element gene -0.47 0.32 -0.31
39 AT4G14780 Protein kinase superfamily protein -0.47 0.31 -0.33
40 AT2G22830 squalene epoxidase 2 squalene epoxidase 2 0.46 0.31 -0.32
41 AT4G28530 NAC domain containing protein 74 NAC domain containing protein 74,
NAC domain containing protein 74		 0.46 0.32 -0.3
42 AT3G50480 homolog of RPW8 4 homolog of RPW8 4 -0.46 0.29 -0.32
43 AT2G33100 cellulose synthase-like D1 cellulose synthase-like D1,
cellulose synthase-like D1,
CELLULOSE-SYNTHASE LIKE D1		 0.46 0.32 -0.32
44 AT1G01340 cyclic nucleotide gated channel 10 ACBK1, cyclic nucleotide gated
channel 10, cyclic nucleotide
gated channel 10		 -0.46 0.3 -0.34
45 AT5G23960 terpene synthase 21 ATTPS21, terpene synthase 21 -0.46 0.31 -0.31
46 AT2G34890 CTP synthase family protein 0.45 0.33 -0.32
47 AT5G18350 Disease resistance protein (TIR-NBS-LRR class) family -0.45 0.3 -0.3
48 AT5G19830 Peptidyl-tRNA hydrolase family protein -0.45 0.3 -0.31
49 AT5G61430 NAC domain containing protein 100 NAC domain containing protein 100,
ATNAC5, NAC domain containing
protein 100		 -0.45 0.31 -0.31
50 AT3G43160 maternal effect embryo arrest 38 maternal effect embryo arrest 38 -0.45 0.31 -0.33
51 AT4G21420 transposable element gene 0.44 0.33 -0.32
52 AT5G07770 Actin-binding FH2 protein 0.44 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
53 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.7 0.47 -0.44 C0016