AT3G56510 : -
Query Information
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AGICode AT3G56510
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56510 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.32 -0.3
2 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 0.74 0.32 -0.31
3 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.73 0.3 -0.31
4 AT5G47060 Protein of unknown function (DUF581) 0.71 0.31 -0.31
5 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.69 0.32 -0.31
6 AT5G66510 gamma carbonic anhydrase 3 gamma carbonic anhydrase 3 0.69 0.29 -0.32
7 AT5G47820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 FRAGILE FIBER 1 -0.68 0.34 -0.28
8 AT3G44630 Disease resistance protein (TIR-NBS-LRR class) family -0.67 0.32 -0.3
9 AT1G26150 proline-rich extensin-like receptor kinase 10 proline-rich extensin-like
receptor kinase 10, proline-rich
extensin-like receptor kinase 10		 -0.67 0.33 -0.3
10 AT5G58660 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.67 0.32 -0.31
11 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 -0.67 0.33 -0.3
12 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 -0.64 0.32 -0.28
13 AT2G24330 Protein of unknown function (DUF2296) 0.64 0.3 -0.33
14 AT1G14460 AAA-type ATPase family protein -0.63 0.33 -0.3
15 AT1G19140 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ubiquinone biosynthetic process; LOCATED IN: mitochondrion;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: COQ9
(InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9
(InterPro:IPR012762); Has 748 Blast hits to 748 proteins in
260 species: Archae - 0; Bacteria - 218; Metazoa - 126;
Fungi - 101; Plants - 39; Viruses - 0; Other Eukaryotes -
264 (source: NCBI BLink).		 0.63 0.31 -0.31
16 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.63 0.33 -0.31
17 AT4G01530 transposable element gene 0.62 0.32 -0.31
18 AT3G26640 Transducin/WD40 repeat-like superfamily protein LIGHT-REGULATED WD 2 0.62 0.3 -0.31
19 AT5G51410 LUC7 N_terminus domain-containing protein 0.62 0.33 -0.32
20 AT1G30070 SGS domain-containing protein 0.61 0.31 -0.31
21 AT2G30000 PHF5-like protein 0.61 0.3 -0.29
22 AT1G11160 Transducin/WD40 repeat-like superfamily protein -0.6 0.32 -0.31
23 AT5G60790 ABC transporter family protein ATP-binding cassette F1,
ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 1, GENERAL
CONTROL NON-REPRESSIBLE 1		 0.6 0.33 -0.32
24 AT3G03360 F-box/RNI-like superfamily protein -0.6 0.29 -0.31
25 AT2G20650 RING/U-box superfamily protein -0.6 0.33 -0.3
26 AT5G51290 Diacylglycerol kinase family protein -0.59 0.29 -0.31
27 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.59 0.31 -0.31
28 AT2G45210 SAUR-like auxin-responsive protein family 0.59 0.33 -0.31
29 AT5G63990 Inositol monophosphatase family protein 0.59 0.33 -0.31
30 AT2G18390 ADP-ribosylation factor family protein ARF-LIKE 2, ATARLC1, HALLIMASCH,
TITAN 5		 0.59 0.31 -0.32
31 AT1G59600 ZCW7 ZCW7 0.58 0.3 -0.3
32 AT5G11310 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.31 -0.31
33 AT1G12730 GPI transamidase subunit PIG-U -0.58 0.32 -0.33
34 AT1G33430 Galactosyltransferase family protein -0.58 0.3 -0.31
35 AT1G53910 related to AP2 12 related to AP2 12 0.58 0.32 -0.28
36 AT1G04410 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 1		 0.58 0.32 -0.31
37 AT5G09970 cytochrome P450, family 78, subfamily A, polypeptide 7 cytochrome P450, family 78,
subfamily A, polypeptide 7		 0.58 0.3 -0.32
38 AT4G22000 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.57 0.32 -0.3
39 AT2G45520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages; Has
260 Blast hits to 238 proteins in 75 species: Archae - 0;
Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38;
Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).		 0.57 0.32 -0.32
40 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein 0.57 0.31 -0.32
41 AT5G59380 methyl-CPG-binding domain 6 ATMBD6, methyl-CPG-binding domain
6		 0.57 0.31 -0.33
42 AT1G30160 Protein of unknown function (DUF295) -0.57 0.31 -0.32
43 AT4G33200 myosin, putative MYOSIN XI I, MYOSIN XI-15, XI-I -0.57 0.33 -0.3
44 AT4G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G35658.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.57 0.32 -0.29
45 AT4G28430 Reticulon family protein -0.57 0.3 -0.31
46 AT3G45810 ferric reductase-like transmembrane component family
protein		 -0.57 0.32 -0.31
47 AT2G15530 RING/U-box superfamily protein -0.56 0.32 -0.29
48 AT5G66420 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP033271 (InterPro:IPR008322), TIM-barrel signal
transduction protein, predicted (InterPro:IPR009215); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.31 -0.34
49 AT1G77740 phosphatidylinositol-4-phosphate 5-kinase 2 phosphatidylinositol-4-phosphate
5-kinase 2		 -0.56 0.32 -0.3
50 AT1G51670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48180.1); Has 37 Blast hits
to 37 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.31 -0.31
51 AT5G38370 Protein of unknown function (DUF1644) -0.56 0.33 -0.31
52 AT2G02360 phloem protein 2-B10 phloem protein 2-B10, phloem
protein 2-B10		 -0.55 0.32 -0.32
53 AT5G46470 disease resistance protein (TIR-NBS-LRR class) family RESISTANT TO P. SYRINGAE 6 -0.55 0.32 -0.33
54 AT4G38590 beta-galactosidase 14 beta-galactosidase 14 -0.54 0.3 -0.33
55 AT3G13840 GRAS family transcription factor -0.54 0.35 -0.29
56 AT5G35670 IQ-domain 33 IQ-domain 33 -0.54 0.33 -0.3
57 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.54 0.31 -0.31
58 AT5G20330 beta-1,3-glucanase 4 beta-1,3-glucanase 4 -0.53 0.31 -0.32
59 AT2G35550 basic pentacysteine 7 BASIC PENTACYSTEINE 7, BBR, basic
pentacysteine 7		 -0.53 0.33 -0.33
60 AT1G22275 Myosin heavy chain-related protein ZYP1, ZYP1b -0.53 0.33 -0.32
61 AT4G26850 mannose-1-phosphate guanylyltransferase
(GDP)s;GDP-galactose:mannose-1-phosphate
guanylyltransferases;GDP-galactose:glucose-1-phosphate
guanylyltransferases;GDP-galactose:myoinositol-1-phosphate
guanylyltransferases;glucose-1-phosphate
guanylyltransferase		 vitamin c defective 2 -0.53 0.33 -0.3
62 AT3G61010 Ferritin/ribonucleotide reductase-like family protein -0.53 0.31 -0.32
63 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 -0.53 0.32 -0.31
64 AT1G67140 HEAT repeat-containing protein SWEETIE -0.52 0.32 -0.3
65 AT4G33740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast
hits to 73191 proteins in 2959 species: Archae - 732;
Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants -
7078; Viruses - 1046; Other Eukaryotes - 46007 (source:
NCBI BLink).		 -0.52 0.32 -0.31
66 AT1G43780 serine carboxypeptidase-like 44 serine carboxypeptidase-like 44 -0.52 0.31 -0.3
67 AT3G17740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast
hits to 335 proteins in 133 species: Archae - 1; Bacteria -
0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink).		 -0.52 0.3 -0.33
68 AT1G07190 BEST Arabidopsis thaliana protein match is: lon protease 1
(TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in
47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi -
11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.51 0.31 -0.32
69 AT4G27850 Glycine-rich protein family -0.51 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0212 PR_MST_2336.8 - - - -0.57 0.45 -0.43
71 C0235 Sinapoyl malate Sinapoyl-(S)-malate Sinapoyl-(S)-malate sinapate ester biosynthesis -0.52 0.31 -0.32 C0235