AT3G56520 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G56520
Description NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56520 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 1 0.32 -0.33
2 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.75 0.32 -0.32
3 AT1G18510 tetraspanin 16 tetraspanin 16 -0.73 0.33 -0.31
4 AT3G12840 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.73 0.3 -0.33
5 AT3G57570 ARM repeat superfamily protein -0.71 0.29 -0.34
6 AT1G43260 hAT transposon superfamily protein -0.71 0.3 -0.3
7 AT4G30300 non-intrinsic ABC protein 15 ATP-binding cassette E3,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 15, non-intrinsic ABC
protein 15		 -0.71 0.31 -0.32
8 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 0.7 0.3 -0.33
9 AT5G28590 DNA-binding family protein -0.7 0.31 -0.3
10 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11		 -0.7 0.32 -0.3
11 AT3G21810 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.7 0.31 -0.29
12 AT1G66730 DNA LIGASE 6 DNA LIGASE 6, DNA LIGASE 6 -0.7 0.31 -0.32
13 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 -0.7 0.3 -0.32
14 AT5G57740 XB3 ortholog 2 in Arabidopsis thaliana XB3 ortholog 2 in Arabidopsis
thaliana		 -0.7 0.3 -0.32
15 AT2G10930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48500.1); Has 7 Blast hits to
7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.69 0.3 -0.31
16 AT3G43880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G07526.3); Has 32 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.29 -0.31
17 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 -0.69 0.3 -0.32
18 ATMG00820 Reverse transcriptase (RNA-dependent DNA polymerase) ORF170 -0.69 0.32 -0.3
19 AT1G10900 Phosphatidylinositol-4-phosphate 5-kinase family protein -0.69 0.31 -0.33
20 AT1G74740 calcium-dependent protein kinase 30 ATCPK30, CALCIUM-DEPENDENT PROTEIN
KINASE 1A, calcium-dependent
protein kinase 30		 0.69 0.33 -0.31
21 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.68 0.31 -0.31
22 AT3G24315 Sec20 family protein AtSec20 0.68 0.33 -0.32
23 AT2G14020 transposable element gene -0.68 0.32 -0.31
24 AT4G38760 Protein of unknown function (DUF3414) -0.68 0.32 -0.32
25 AT2G10970 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.68 0.33 -0.31
26 AT4G16500 Cystatin/monellin superfamily protein 0.68 0.31 -0.3
27 AT5G08440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23490.1); Has 141 Blast
hits to 139 proteins in 35 species: Archae - 0; Bacteria -
9; Metazoa - 21; Fungi - 6; Plants - 94; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.68 0.33 -0.31
28 AT3G13170 Spo11/DNA topoisomerase VI, subunit A protein ATSPO11-1 -0.68 0.31 -0.31
29 AT2G31760 RING/U-box superfamily protein ARIADNE 10, ARABIDOPSIS ARIADNE 10 -0.67 0.31 -0.32
30 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.67 0.31 -0.31
31 AT3G26140 Cellulase (glycosyl hydrolase family 5) protein -0.67 0.32 -0.31
32 AT4G13060 F-box associated ubiquitination effector family protein -0.67 0.34 -0.32
33 AT1G22290 14-3-3 family protein -0.66 0.32 -0.32
34 AT1G11060 WAPL (Wings apart-like protein regulation of
heterochromatin) protein		 -0.66 0.32 -0.31
35 AT4G15200 formin 3 formin 3, formin 3 -0.66 0.32 -0.3
36 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.32
37 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.29 -0.3
38 AT4G30050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.3 -0.32
39 AT3G04880 DNA-damage-repair/toleration protein (DRT102) DNA-DAMAGE-REPAIR/TOLERATION 2 0.66 0.3 -0.31
40 AT4G23950 Galactose-binding protein -0.66 0.32 -0.33
41 AT3G49510 F-box family protein 0.66 0.32 -0.32
42 AT1G68980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.65 0.32 -0.3
43 AT5G02690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 9 growth stages; Has 2 Blast hits to 2
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.65 0.34 -0.32
44 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 -0.65 0.34 -0.34
45 AT1G66170 RING/FYVE/PHD zinc finger superfamily protein MALE MEIOCYTE DEATH 1 -0.65 0.32 -0.33
46 AT1G58300 heme oxygenase 4 heme oxygenase 4 -0.65 0.31 -0.31
47 AT4G21130 Transducin/WD40 repeat-like superfamily protein EMBRYO DEFECTIVE 2271 0.65 0.32 -0.3
48 AT5G65440 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G24610.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.65 0.33 -0.32
49 AT1G68240 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.65 0.3 -0.32
50 AT3G42290 transposable element gene 0.65 0.31 -0.31
51 AT1G53090 SPA1-related 4 SPA1-related 4 -0.65 0.31 -0.32
52 AT2G15610 Protein of unknown function (DUF1685) -0.65 0.32 -0.31
53 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.3 -0.32
54 AT2G01390 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 3111 -0.65 0.3 -0.33
55 AT3G56160 Sodium Bile acid symporter family -0.65 0.31 -0.31
56 AT1G07990 SIT4 phosphatase-associated family protein -0.64 0.33 -0.32
57 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 -0.64 0.32 -0.31
58 AT3G49400 Transducin/WD40 repeat-like superfamily protein -0.64 0.33 -0.31
59 AT5G41850 alpha/beta-Hydrolases superfamily protein -0.64 0.3 -0.31
60 AT3G44740 Class II aaRS and biotin synthetases superfamily protein -0.64 0.31 -0.3
61 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 -0.64 0.31 -0.3
62 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 0.64 0.33 -0.32
63 AT3G46200 nudix hydrolase homolog 9 nudix hydrolase homolog 9, nudix
hydrolase homolog 9		 -0.64 0.3 -0.32
64 AT1G79820 Major facilitator superfamily protein SUPPRESSOR OF G PROTEIN BETA1 -0.64 0.3 -0.33
65 AT2G41580 transposable element gene 0.64 0.32 -0.31
66 AT1G27370 squamosa promoter binding protein-like 10 squamosa promoter binding
protein-like 10		 -0.64 0.32 -0.31
67 AT1G70620 cyclin-related -0.64 0.31 -0.31
68 AT5G01550 lectin receptor kinase a4.1 lectin receptor kinase a4.1 -0.64 0.31 -0.32
69 AT3G18450 PLAC8 family protein 0.64 0.32 -0.32
70 AT5G11360 Interleukin-1 receptor-associated kinase 4 protein -0.63 0.33 -0.33
71 AT1G16940 F-box/RNI-like/FBD-like domains-containing protein -0.63 0.31 -0.32
72 AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40
(CYP40) / rotamase		 CYCLOPHILIN 40, SQUINT 0.63 0.3 -0.33
73 AT3G59340 Eukaryotic protein of unknown function (DUF914) 0.63 0.32 -0.31
74 AT3G04810 NIMA-related kinase 2 NIMA-related kinase 2,
NIMA-related kinase 2		 -0.63 0.31 -0.33
75 AT1G12260 NAC 007 NAC 007, EMBRYO DEFECTIVE 2749,
NAC 007, VASCULAR RELATED
NAC-DOMAIN PROTEIN 4		 -0.63 0.33 -0.32
76 AT1G13200 F-box and associated interaction domains-containing protein -0.63 0.32 -0.31
77 AT5G39560 Galactose oxidase/kelch repeat superfamily protein -0.63 0.31 -0.31
78 AT2G23660 LOB domain-containing protein 10 LOB domain-containing protein 10 -0.63 0.32 -0.33
79 AT4G33870 Peroxidase superfamily protein -0.63 0.31 -0.32
80 AT2G35460 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.63 0.3 -0.31
81 AT3G28120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.63 0.33 -0.29
82 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 0.63 0.31 -0.28
83 AT4G00280 BEST Arabidopsis thaliana protein match is: Leucine-rich
repeat transmembrane protein kinase protein
(TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.32 -0.31
84 AT2G34315 Avirulence induced gene (AIG1) family protein -0.63 0.31 -0.32
85 AT1G36230 unknown protein; Has 5786 Blast hits to 627 proteins in 69
species: Archae - 0; Bacteria - 5701; Metazoa - 46; Fungi -
22; Plants - 13; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.63 0.32 -0.3
86 AT3G45810 ferric reductase-like transmembrane component family
protein		 -0.63 0.32 -0.3
87 AT2G11090 transposable element gene -0.63 0.31 -0.32
88 AT1G06630 F-box/RNI-like superfamily protein 0.62 0.32 -0.31
89 AT3G42690 transposable element gene -0.62 0.3 -0.31
90 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.33 -0.32
91 AT1G31530 DNAse I-like superfamily protein -0.62 0.32 -0.31
92 AT4G24500 hydroxyproline-rich glycoprotein family protein 0.62 0.34 -0.32
93 AT1G43700 VIRE2-interacting protein 1 sulphate utilization efficiency 3,
VIRE2-interacting protein 1		 0.62 0.31 -0.33
94 AT1G21010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.32 -0.33
95 AT1G63190 Cystatin/monellin superfamily protein -0.62 0.3 -0.32
96 AT4G36790 Major facilitator superfamily protein 0.62 0.31 -0.31
97 AT3G60260 ELMO/CED-12 family protein 0.62 0.34 -0.31
98 AT2G33460 ROP-interactive CRIB motif-containing protein 1 ROP-interactive CRIB
motif-containing protein 1		 -0.62 0.32 -0.33
99 AT3G42460 transposable element gene -0.61 0.3 -0.33
100 AT2G18720 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.61 0.31 -0.31
101 AT5G39870 Protein of unknown function (DUF1216) -0.61 0.32 -0.3
102 AT5G19500 Tryptophan/tyrosine permease -0.61 0.32 -0.33
103 AT5G15070 Phosphoglycerate mutase-like family protein -0.61 0.32 -0.33
104 AT2G06230 transposable element gene -0.61 0.33 -0.32
105 AT4G04650 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 -0.61 0.31 -0.32
106 AT5G18160 F-box and associated interaction domains-containing protein 0.61 0.32 -0.3
107 AT2G10010 transposable element gene -0.61 0.32 -0.3
108 AT1G77730 Pleckstrin homology (PH) domain superfamily protein -0.61 0.33 -0.32
109 AT2G27990 BEL1-like homeodomain 8 BEL1-like homeodomain 8,
POUND-FOOLISH		 -0.61 0.32 -0.31
110 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 -0.61 0.31 -0.32
111 AT5G27190 transposable element gene -0.61 0.31 -0.3
112 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.31 -0.31
113 AT4G28395 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 ANTHER 7, ARABIDOPSIS THALIANA
ANTHER 7		 -0.61 0.32 -0.31
114 AT3G45590 splicing endonuclease 1 splicing endonuclease 1, splicing
endonuclease 1		 0.61 0.33 -0.32
115 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 -0.6 0.31 -0.33
116 AT5G49430 WD40/YVTN repeat-like-containing domain;Bromodomain -0.6 0.32 -0.3
117 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.31 -0.31
118 AT2G47850 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.6 0.31 -0.33
119 AT2G19630 F-box and associated interaction domains-containing protein -0.6 0.31 -0.31
120 AT2G26630 transposable element gene -0.6 0.33 -0.32
121 AT5G28620 protein kinase C-related 0.6 0.32 -0.31
122 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 -0.6 0.31 -0.3
123 AT3G04200 RmlC-like cupins superfamily protein -0.6 0.32 -0.32
124 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.6 0.32 -0.3
125 AT5G41320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.32 -0.32
126 AT4G39610 Protein of unknown function, DUF617 0.6 0.31 -0.3
127 AT5G45570 Ulp1 protease family protein -0.6 0.32 -0.31
128 AT5G61250 glucuronidase 1 glucuronidase 1, glucuronidase 1 -0.6 0.33 -0.32
129 AT1G28560 snRNA activating complex family protein SHOOT REDIFFERENTIATION DEFECTIVE
2		 -0.6 0.31 -0.34
130 AT4G15430 ERD (early-responsive to dehydration stress) family protein -0.6 0.31 -0.3
131 AT4G22430 F-box family protein 0.6 0.32 -0.34
132 AT2G30090 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.6 0.33 -0.29
133 AT3G20400 F-box associated ubiquitination effector family protein EMBRYO DEFECTIVE 2743 -0.6 0.32 -0.32
134 AT2G17610 transposable element gene -0.6 0.3 -0.33
135 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 0.6 0.29 -0.33
136 AT1G31050 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.59 0.32 -0.33
137 AT4G13130 Cysteine/Histidine-rich C1 domain family protein 0.59 0.3 -0.32
138 AT5G19490 Histone superfamily protein 0.59 0.3 -0.31
139 AT4G12040 A20/AN1-like zinc finger family protein AtSAP7, stress-associated protein
7		 0.59 0.32 -0.31
140 AT1G26860 transposable element gene 0.59 0.32 -0.34
141 AT5G66430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.59 0.32 -0.32
142 AT2G41930 Protein kinase superfamily protein 0.59 0.33 -0.32
143 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.29 -0.32
144 AT3G02270 Trimeric LpxA-like enzyme 0.58 0.3 -0.34
145 AT3G20900 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.31 -0.3
146 AT1G14540 Peroxidase superfamily protein 0.58 0.32 -0.32
147 AT2G42660 Homeodomain-like superfamily protein 0.58 0.31 -0.32
148 AT3G22360 alternative oxidase 1B alternative oxidase 1B 0.58 0.28 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
149 C0192 Oxalic acid - Oxalate ascorbate degradation -0.7 0.42 -0.42 C0192
150 C0119 Indole-3-ylmethyl-glucosinolate - indol-3-ylmethyl glucosinolate indole glucosinolate breakdown (active in intact plant cell),
indole glucosinolate breakdown (insect chewing induced),
glucosinolate biosynthesis from tryptophan 		0.64 0.47 -0.47 C0119
151 C0185 MST_3139.9 - - - 0.58 0.46 -0.46