AT3G56260 : -
Query Information
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AGICode AT3G56260
Description unknown protein; Has 20 Blast hits to 19 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 10; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56260 unknown protein; Has 20 Blast hits to 19 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2;
Plants - 10; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 1 0.31 -0.3
2 AT2G19780 Leucine-rich repeat (LRR) family protein 0.75 0.32 -0.31
3 AT4G02420 Concanavalin A-like lectin protein kinase family protein 0.74 0.31 -0.33
4 AT4G24010 cellulose synthase like G1 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE G1, cellulose
synthase like G1		 0.73 0.32 -0.32
5 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 0.7 0.3 -0.31
6 AT5G52320 cytochrome P450, family 96, subfamily A, polypeptide 4 cytochrome P450, family 96,
subfamily A, polypeptide 4		 0.7 0.33 -0.3
7 AT1G62770 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.7 0.33 -0.31
8 AT5G26220 ChaC-like family protein 0.7 0.33 -0.3
9 AT4G23990 cellulose synthase like G3 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE-LIKE G3, cellulose
synthase like G3		 0.69 0.33 -0.3
10 AT1G52400 beta glucosidase 18 A. THALIANA BETA-GLUCOSIDASE 1,
BETA-GLUCOSIDASE HOMOLOG 1, beta
glucosidase 18		 0.68 0.3 -0.33
11 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.3 -0.29
12 AT5G05860 UDP-glucosyl transferase 76C2 UDP-glucosyl transferase 76C2 -0.68 0.3 -0.31
13 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.31 -0.31
14 AT5G61290 Flavin-binding monooxygenase family protein 0.68 0.31 -0.32
15 AT3G55130 white-brown complex homolog 19 ATP-binding cassette G19,
white-brown complex homolog 19,
white-brown complex homolog 19		 0.68 0.34 -0.33
16 AT1G75590 SAUR-like auxin-responsive protein family -0.68 0.3 -0.32
17 AT5G03670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits
to 624 proteins in 104 species: Archae - 0; Bacteria - 18;
Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other
Eukaryotes - 192 (source: NCBI BLink).		 -0.68 0.32 -0.32
18 AT5G06800 myb-like HTH transcriptional regulator family protein -0.68 0.3 -0.31
19 AT5G50160 ferric reduction oxidase 8 FERRIC REDUCTION OXIDASE 8, ferric
reduction oxidase 8		 0.67 0.32 -0.33
20 AT5G44050 MATE efflux family protein 0.67 0.33 -0.3
21 AT4G11240 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP7 -0.67 0.32 -0.3
22 AT3G62860 alpha/beta-Hydrolases superfamily protein -0.67 0.3 -0.32
23 AT3G45140 lipoxygenase 2 ARABIODOPSIS THALIANA LIPOXYGENASE
2, lipoxygenase 2		 0.66 0.3 -0.3
24 AT5G63660 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
74, PDF2.5		 -0.66 0.32 -0.33
25 AT1G05170 Galactosyltransferase family protein 0.66 0.33 -0.33
26 AT5G54040 Cysteine/Histidine-rich C1 domain family protein -0.65 0.35 -0.34
27 AT2G33340 MOS4-associated complex 3B MOS4-associated complex 3B -0.65 0.35 -0.32
28 AT3G56050 Protein kinase family protein 0.65 0.3 -0.33
29 AT4G14130 xyloglucan endotransglucosylase/hydrolase 15 xyloglucan
endotransglucosylase/hydrolase 15,
xyloglucan endotransglycosylase 7		 -0.65 0.32 -0.32
30 AT2G34910 BEST Arabidopsis thaliana protein match is: root hair
specific 4 (TAIR:AT1G30850.1); Has 43 Blast hits to 43
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.32 -0.33
31 AT3G13440 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.3 -0.32
32 AT5G58750 NAD(P)-binding Rossmann-fold superfamily protein -0.64 0.32 -0.3
33 AT4G17480 alpha/beta-Hydrolases superfamily protein 0.64 0.33 -0.31
34 AT2G37340 arginine/serine-rich zinc knuckle-containing protein 33 arginine/serine-rich zinc
knuckle-containing protein 33,
ARGININE/SERINE-RICH ZINC
KNUCKLE-CONTAINING PROTEIN 33,
arginine/serine-rich zinc
knuckle-containing protein 33,
arginine/serine-rich zinc
knuckle-containing protein 33		 -0.64 0.3 -0.33
35 AT2G23050 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 4, NAKED PINS
IN YUC MUTANTS 4		 -0.63 0.3 -0.31
36 AT5G50800 Nodulin MtN3 family protein AtSWEET13, SWEET13 0.63 0.32 -0.32
37 AT3G13580 Ribosomal protein L30/L7 family protein -0.63 0.31 -0.31
38 AT2G24300 Calmodulin-binding protein -0.62 0.33 -0.3
39 AT1G33790 jacalin lectin family protein -0.62 0.33 -0.32
40 AT3G56710 sigma factor binding protein 1 sigma factor binding protein 1 0.62 0.32 -0.31
41 AT1G66460 Protein kinase superfamily protein 0.62 0.32 -0.32
42 AT1G50060 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.62 0.3 -0.32
43 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 -0.62 0.31 -0.32
44 AT1G44830 Integrase-type DNA-binding superfamily protein -0.62 0.33 -0.32
45 AT1G48950 C3HC zinc finger-like -0.61 0.31 -0.29
46 AT2G20340 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 0.61 0.31 -0.33
47 AT3G56060 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 0.61 0.33 -0.3
48 AT1G18870 isochorismate synthase 2 ARABIDOPSIS ISOCHORISMATE SYNTHASE
2, isochorismate synthase 2		 0.61 0.32 -0.32
49 AT1G50440 RING/FYVE/PHD zinc finger superfamily protein 0.61 0.32 -0.3
50 AT4G33800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.34 -0.3
51 AT4G28890 RING/U-box superfamily protein -0.61 0.3 -0.32
52 AT4G14090 UDP-Glycosyltransferase superfamily protein 0.61 0.31 -0.32
53 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.6 0.32 -0.31
54 AT4G31430 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
25 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.6 0.31 -0.3
55 AT5G20820 SAUR-like auxin-responsive protein family -0.6 0.31 -0.33
56 AT4G17695 Homeodomain-like superfamily protein KANADI 3 0.6 0.31 -0.28
57 AT3G13222 GBF-interacting protein 1 GBF-interacting protein 1 -0.6 0.32 -0.31
58 AT1G30080 Glycosyl hydrolase superfamily protein -0.6 0.3 -0.31
59 AT3G60550 cyclin p3;2 cyclin p3;2 -0.6 0.3 -0.3
60 AT2G16280 3-ketoacyl-CoA synthase 9 3-ketoacyl-CoA synthase 9 0.59 0.32 -0.31
61 AT1G46264 heat shock transcription factor B4 AT-HSFB4, heat shock transcription
factor B4, SCHIZORIZA		 -0.59 0.31 -0.32
62 AT5G04770 cationic amino acid transporter 6 ARABIDOPSIS THALIANA CATIONIC
AMINO ACID TRANSPORTER 6, cationic
amino acid transporter 6		 -0.59 0.31 -0.29
63 AT1G61590 Protein kinase superfamily protein -0.59 0.31 -0.31
64 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 0.59 0.32 -0.32
65 AT1G64710 GroES-like zinc-binding dehydrogenase family protein 0.59 0.31 -0.33
66 AT1G21910 Integrase-type DNA-binding superfamily protein dehydration response
element-binding protein 26		 -0.59 0.31 -0.33
67 AT1G74500 activation-tagged BRI1(brassinosteroid-insensitive
1)-suppressor 1		 activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, TARGET OF
MONOPTEROS 7		 -0.59 0.31 -0.32
68 AT5G67400 root hair specific 19 root hair specific 19 -0.58 0.33 -0.32
69 AT5G11610 Exostosin family protein 0.58 0.34 -0.31
70 AT5G05880 UDP-Glycosyltransferase superfamily protein -0.58 0.31 -0.32
71 AT5G62920 response regulator 6 response regulator 6 -0.58 0.34 -0.29
72 AT1G30870 Peroxidase superfamily protein -0.58 0.33 -0.33
73 AT1G76960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 8 growth stages; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.57 0.31 -0.31
74 AT4G27435 Protein of unknown function (DUF1218) 0.57 0.31 -0.31
75 AT3G22090 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71470.2); Has 12 Blast hits
to 12 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.29 -0.32
76 AT1G56020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12970.1); Has 3011 Blast hits
to 958 proteins in 192 species: Archae - 0; Bacteria - 193;
Metazoa - 479; Fungi - 286; Plants - 158; Viruses - 8;
Other Eukaryotes - 1887 (source: NCBI BLink).		 -0.57 0.31 -0.33
77 AT1G23870 trehalose-phosphatase/synthase 9 trehalose-phosphatase/synthase 9,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S9, trehalose-phosphatase/synthase
9		 -0.57 0.33 -0.32
78 AT5G48130 Phototropic-responsive NPH3 family protein -0.57 0.3 -0.32
79 AT1G09280 CONTAINS InterPro DOMAIN/s: Rhodanese-like
(InterPro:IPR001763), Serine hydrolase
(InterPro:IPR005645); BEST Arabidopsis thaliana protein
match is: Rhodanese/Cell cycle control phosphatase
superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits
to 5912 proteins in 1592 species: Archae - 0; Bacteria -
2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses -
0; Other Eukaryotes - 2186 (source: NCBI BLink).		 -0.57 0.31 -0.35
80 AT5G43150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.57 0.33 -0.32
81 AT4G25760 glutamine dumper 2 glutamine dumper 2, glutamine
dumper 2		 0.57 0.33 -0.3
82 AT5G54200 Transducin/WD40 repeat-like superfamily protein -0.57 0.31 -0.33
83 AT1G72090 Methylthiotransferase -0.56 0.29 -0.31
84 AT2G48100 Exonuclease family protein -0.56 0.3 -0.33
85 AT5G54610 ankyrin ankyrin 0.56 0.31 -0.32
86 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 -0.56 0.33 -0.32
87 AT3G50850 Putative methyltransferase family protein -0.56 0.32 -0.32
88 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.32 -0.32
89 AT3G49790 Carbohydrate-binding protein -0.56 0.32 -0.3
90 AT2G32620 cellulose synthase-like B cellulose synthase-like B,
CELLULOSE SYNTHASE LIKE B2,
CELLULOSE SYNTHASE LIKE B2,
cellulose synthase-like B		 -0.56 0.3 -0.34
91 AT1G27620 HXXXD-type acyl-transferase family protein -0.56 0.3 -0.32
92 AT1G07170 PHF5-like protein -0.55 0.32 -0.31
93 AT2G34900 Transcription factor GTE6 GTE01, GLOBAL TRANSCRIPTION FACTOR
GROUP E1, IMBIBITION-INDUCIBLE 1		 -0.55 0.32 -0.31
94 AT1G74660 mini zinc finger 1 mini zinc finger 1 -0.55 0.32 -0.31
95 AT2G20680 Glycosyl hydrolase superfamily protein AtMAN2, endo-beta-mannase 2 -0.55 0.31 -0.3
96 AT5G63650 SNF1-related protein kinase 2.5 SNRK2-5, SNF1-related protein
kinase 2.5, SNF1-RELATED PROTEIN
KINASE 2H		 -0.55 0.31 -0.32
97 AT2G24980 Proline-rich extensin-like family protein extensin 6 -0.55 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		0.72 0.42 -0.47 C0109
99 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		0.63 0.43 -0.43 C0015
100 C0098 Glucose D-Glucose alpha-D-glucose; beta-D-glucose trehalose degradation II (trehalase),
indole glucosinolate breakdown (active in intact plant cell),
coumarin biosynthesis (via 2-coumarate),
glucosinolate biosynthesis from tryptophan,
sinapate ester biosynthesis,
GDP-glucose biosynthesis,
coniferin metabolism,
melibiose degradation,
indole glucosinolate breakdown (insect chewing induced) 		0.57 0.33 -0.33 C0098