AT3G56300 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G56300
Description Cysteinyl-tRNA synthetase, class Ia family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein 1 0.31 -0.32
2 AT5G38140 nuclear factor Y, subunit C12 nuclear factor Y, subunit C12 0.82 0.32 -0.31
3 AT2G38780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi
- 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.81 0.31 -0.31
4 AT5G65685 UDP-Glycosyltransferase superfamily protein 0.81 0.3 -0.32
5 AT3G55630 DHFS-FPGS homolog D DHFS-FPGS homolog D, DHFS-FPGS
homolog D, folylpolyglutamate
synthetase 3		 0.77 0.3 -0.31
6 AT1G07110 fructose-2,6-bisphosphatase ATF2KP,
fructose-2,6-bisphosphatase, FKFBP		 0.77 0.32 -0.31
7 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 0.77 0.32 -0.32
8 AT5G20220 zinc knuckle (CCHC-type) family protein 0.76 0.32 -0.31
9 AT1G31800 cytochrome P450, family 97, subfamily A, polypeptide 3 cytochrome P450, family 97,
subfamily A, polypeptide 3, LUTEIN
DEFICIENT 5		 0.74 0.31 -0.33
10 AT5G61830 NAD(P)-binding Rossmann-fold superfamily protein 0.74 0.34 -0.3
11 AT5G22720 F-box/RNI-like superfamily protein 0.74 0.3 -0.31
12 AT4G26700 fimbrin 1 ARABIDOPSIS THALIANA FIMBRIN 1,
fimbrin 1		 0.73 0.31 -0.33
13 AT3G11620 alpha/beta-Hydrolases superfamily protein 0.73 0.32 -0.32
14 AT1G62920 CONTAINS InterPro DOMAIN/s: Proteasome maturation factor
UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana
protein match is: Proteasome maturation factor UMP1
(TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.32 -0.34
15 AT5G35170 adenylate kinase family protein 0.71 0.32 -0.31
16 AT2G17640 Trimeric LpxA-like enzymes superfamily protein ATSERAT3;1, SERINE
ACETYLTRANSFERASE 106		 0.7 0.31 -0.31
17 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.7 0.32 -0.31
18 AT1G22860 Vacuolar sorting protein 39 0.69 0.32 -0.33
19 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 0.69 0.32 -0.31
20 AT5G44660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits
to 462 proteins in 141 species: Archae - 2; Bacteria - 370;
Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other
Eukaryotes - 239 (source: NCBI BLink).		 0.69 0.3 -0.3
21 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.68 0.3 -0.34
22 AT5G38770 glutamine dumper 7 glutamine dumper 7, glutamine
dumper 7		 0.68 0.34 -0.32
23 AT3G26085 CAAX amino terminal protease family protein 0.67 0.31 -0.31
24 AT1G72990 beta-galactosidase 17 beta-galactosidase 17 0.67 0.31 -0.31
25 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.67 0.33 -0.32
26 AT2G41580 transposable element gene -0.67 0.32 -0.3
27 AT1G50250 FTSH protease 1 FTSH protease 1 0.67 0.33 -0.33
28 AT1G70620 cyclin-related 0.67 0.32 -0.3
29 AT3G57470 Insulinase (Peptidase family M16) family protein 0.66 0.31 -0.3
30 AT4G33180 alpha/beta-Hydrolases superfamily protein 0.66 0.34 -0.32
31 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.66 0.33 -0.33
32 AT1G19485 Transducin/WD40 repeat-like superfamily protein 0.66 0.34 -0.32
33 AT1G28090 Polynucleotide adenylyltransferase family protein 0.65 0.34 -0.3
34 AT4G03205 Coproporphyrinogen III oxidase hemf2 0.65 0.33 -0.33
35 AT4G30900 DNAse I-like superfamily protein 0.65 0.32 -0.32
36 AT4G15750 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.65 0.3 -0.32
37 AT1G68200 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.65 0.32 -0.33
38 AT5G50180 Protein kinase superfamily protein 0.64 0.31 -0.33
39 AT4G31740 Sec1/munc18-like (SM) proteins superfamily 0.64 0.31 -0.31
40 AT3G13430 RING/U-box superfamily protein -0.64 0.31 -0.31
41 AT2G01810 RING/FYVE/PHD zinc finger superfamily protein -0.64 0.31 -0.29
42 AT1G01450 Protein kinase superfamily protein 0.64 0.32 -0.33
43 AT5G51020 crumpled leaf constitutive activator of
AAA-ATPase, CRUMPLED LEAF		 0.63 0.34 -0.3
44 AT1G31370 Ubiquitin-specific protease family C19-related protein 0.63 0.32 -0.32
45 AT2G24370 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.63 0.31 -0.32
46 AT1G23880 NHL domain-containing protein 0.63 0.29 -0.31
47 AT5G18940 Mo25 family protein 0.63 0.32 -0.32
48 AT5G60070 ankyrin repeat family protein 0.63 0.31 -0.32
49 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.63 0.31 -0.3
50 AT1G27770 autoinhibited Ca2+-ATPase 1 autoinhibited Ca2+-ATPase 1,
PLASTID ENVELOPE ATPASE 1		 -0.63 0.3 -0.33
51 AT5G25490 Ran BP2/NZF zinc finger-like superfamily protein 0.63 0.32 -0.31
52 AT5G58680 ARM repeat superfamily protein -0.62 0.32 -0.33
53 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 -0.62 0.31 -0.32
54 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 -0.62 0.33 -0.31
55 AT3G18250 Putative membrane lipoprotein -0.62 0.29 -0.34
56 AT3G14090 exocyst subunit exo70 family protein D3 exocyst subunit exo70 family
protein D3, exocyst subunit exo70
family protein D3		 -0.61 0.3 -0.3
57 AT3G59440 Calcium-binding EF-hand family protein -0.61 0.32 -0.31
58 AT1G75250 RAD-like 6 RAD-like 6, RAD-like 6,
RADIALIS-LIKE SANT/MYB 3		 -0.61 0.29 -0.31
59 AT4G22780 ACT domain repeat 7 ACT domain repeat 7 -0.61 0.33 -0.32
60 AT4G21490 NAD(P)H dehydrogenase B3 NAD(P)H dehydrogenase B3 -0.61 0.33 -0.32
61 AT3G19680 Protein of unknown function (DUF1005) -0.6 0.32 -0.31
62 AT1G61430 S-locus lectin protein kinase family protein -0.58 0.32 -0.32
63 AT2G13020 transposable element gene -0.58 0.32 -0.32
64 AT1G61460 S-locus protein kinase, putative -0.58 0.32 -0.3
65 AT1G49270 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 7, proline-rich
extensin-like receptor kinase 7		 -0.58 0.3 -0.33
66 AT5G57220 cytochrome P450, family 81, subfamily F, polypeptide 2 cytochrome P450, family 81,
subfamily F, polypeptide 2		 -0.58 0.29 -0.33
67 AT5G40680 Galactose oxidase/kelch repeat superfamily protein -0.58 0.35 -0.3
68 AT2G20330 Transducin/WD40 repeat-like superfamily protein -0.57 0.32 -0.31
69 AT2G22440 BEST Arabidopsis thaliana protein match is: Ribonuclease
H-like superfamily protein (TAIR:AT4G29090.1); Has 208
Blast hits to 191 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.32
70 AT3G29400 exocyst subunit exo70 family protein E1 exocyst subunit exo70 family
protein E1, exocyst subunit exo70
family protein E1		 -0.57 0.3 -0.32
71 AT3G43970 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function (DUF295)
(TAIR:AT5G53240.1); Has 56 Blast hits to 56 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.33 -0.31
72 AT4G25610 C2H2-like zinc finger protein -0.56 0.31 -0.3
73 AT2G02700 Cysteine/Histidine-rich C1 domain family protein -0.56 0.32 -0.32
74 AT3G54810 Plant-specific GATA-type zinc finger transcription factor
family protein		 BLUE MICROPYLAR END 3, BLUE
MICROPYLAR END 3-ZINC FINGER, GATA
TRANSCRIPTION FACTOR 8		 -0.55 0.31 -0.31
75 AT3G52970 cytochrome P450, family 76, subfamily G, polypeptide 1 cytochrome P450, family 76,
subfamily G, polypeptide 1		 -0.55 0.3 -0.32
76 AT3G20990 transposable element gene -0.55 0.33 -0.31
77 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.55 0.3 -0.32
78 AT2G42930 Carbohydrate-binding X8 domain superfamily protein -0.54 0.32 -0.32
79 AT3G50130 Plant protein of unknown function (DUF247) -0.54 0.31 -0.31
80 AT3G27550 RNA-binding CRS1 / YhbY (CRM) domain protein -0.54 0.3 -0.32
81 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 -0.54 0.32 -0.3
82 AT1G18570 myb domain protein 51 myb domain protein 51, BW51A,
BW51B, HIGH INDOLIC GLUCOSINOLATE
1, myb domain protein 51		 -0.54 0.3 -0.32
83 AT3G03290 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.54 0.31 -0.32
84 AT2G10870 transposable element gene -0.54 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
85 C0256 Tryptamine - Tryptamine IAA biosynthesis I 0.73 0.46 -0.45 C0256
86 C0076 Digalactosyldiacylglycerol-34:1 - Digalactosyldiacylglycerol-34:1 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.54 0.33 -0.32