AT3G56110 : prenylated RAB acceptor 1.B1
Query Information
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AGICode AT3G56110
Description prenylated RAB acceptor 1.B1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56110 prenylated RAB acceptor 1.B1 prenylated RAB acceptor 1.B1 1 0.31 -0.34
2 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.77 0.32 -0.3
3 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.76 0.3 -0.31
4 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 0.73 0.32 -0.31
5 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.73 0.32 -0.31
6 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 0.73 0.33 -0.31
7 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.72 0.31 -0.3
8 AT3G51100 unknown protein; Has 48 Blast hits to 48 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.31 -0.35
9 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.72 0.33 -0.33
10 AT1G71070 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.71 0.31 -0.32
11 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.7 0.3 -0.3
12 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.7 0.31 -0.32
13 AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.34 -0.33
14 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 -0.69 0.33 -0.3
15 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 0.69 0.31 -0.31
16 AT5G64710 Putative endonuclease or glycosyl hydrolase 0.68 0.31 -0.34
17 AT1G80910 Protein of unknown function (DUF1712) 0.67 0.34 -0.32
18 AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein 0.67 0.31 -0.3
19 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.67 0.31 -0.27
20 AT3G59920 RAB GDP dissociation inhibitor 2 RAB GDP dissociation inhibitor 2,
RAB GDP dissociation inhibitor 2		 0.67 0.28 -0.32
21 AT5G09900 26S proteasome regulatory subunit, putative (RPN5) EMBRYO DEFECTIVE 2107, MARIPOSA,
REGULATORY PARTICLE NON-ATPASE
SUBUNIT 5A		 0.66 0.31 -0.32
22 AT1G22530 PATELLIN 2 PATELLIN 2 0.66 0.29 -0.34
23 AT5G07500 Zinc finger C-x8-C-x5-C-x3-H type family protein PEI1 -0.66 0.31 -0.33
24 AT2G43160 ENTH/VHS family protein 0.66 0.31 -0.3
25 AT1G16030 heat shock protein 70B heat shock protein 70B -0.66 0.31 -0.31
26 AT5G52390 PAR1 protein -0.66 0.33 -0.34
27 AT1G76090 sterol methyltransferase 3 sterol methyltransferase 3 0.66 0.31 -0.33
28 AT4G29740 cytokinin oxidase 4 ATCKX4, cytokinin oxidase 4 0.64 0.32 -0.29
29 AT3G46580 methyl-CPG-binding domain protein 5 ATMBD5, METHYL-CPG-BINDING DOMAIN
PROTEIN 05, methyl-CPG-binding
domain protein 5		 -0.64 0.31 -0.3
30 AT3G45330 Concanavalin A-like lectin protein kinase family protein 0.64 0.3 -0.31
31 AT3G19920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits
to 217 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.29 -0.31
32 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.63 0.34 -0.31
33 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 -0.63 0.31 -0.32
34 AT1G20330 sterol methyltransferase 2 COTYLEDON VASCULAR PATTERN 1,
FRILL1, sterol methyltransferase 2		 0.63 0.34 -0.3
35 AT4G33905 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.63 0.29 -0.3
36 AT5G59040 copper transporter 3 copper transporter 3 -0.63 0.29 -0.32
37 AT1G13560 aminoalcoholphosphotransferase 1 aminoalcoholphosphotransferase 1,
ATAAPT1		 0.63 0.31 -0.32
38 AT4G28770 Tetraspanin family protein 0.63 0.31 -0.32
39 AT4G16160 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-2, ATOEP16-S -0.63 0.3 -0.32
40 AT3G48370 transposable element gene 0.63 0.31 -0.33
41 AT5G45240 Disease resistance protein (TIR-NBS-LRR class) 0.63 0.29 -0.31
42 AT2G45620 Nucleotidyltransferase family protein -0.63 0.31 -0.33
43 AT1G28160 Integrase-type DNA-binding superfamily protein 0.62 0.32 -0.33
44 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 0.62 0.33 -0.32
45 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 0.62 0.33 -0.31
46 AT2G28680 RmlC-like cupins superfamily protein -0.62 0.31 -0.3
47 AT3G20130 cytochrome P450, family 705, subfamily A, polypeptide 22 cytochrome P450, family 705,
subfamily A, polypeptide 22,
gravity persistence signal 1		 0.62 0.32 -0.32
48 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 0.62 0.33 -0.31
49 AT3G07810 RNA-binding (RRM/RBD/RNP motifs) family protein 0.61 0.33 -0.35
50 AT1G41900 transposable element gene -0.61 0.31 -0.29
51 AT4G37790 Homeobox-leucine zipper protein family HAT22 -0.61 0.31 -0.31
52 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 -0.61 0.3 -0.32
53 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.61 0.29 -0.29
54 AT5G40960 Protein of unknown function (DUF 3339) -0.61 0.34 -0.33
55 AT4G22320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits
to 5363 proteins in 542 species: Archae - 33; Bacteria -
806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses -
151; Other Eukaryotes - 4399 (source: NCBI BLink).		 0.61 0.33 -0.32
56 AT3G60790 F-box family protein -0.6 0.33 -0.32
57 AT1G31370 Ubiquitin-specific protease family C19-related protein -0.59 0.32 -0.31
58 AT3G45420 Concanavalin A-like lectin protein kinase family protein -0.59 0.31 -0.31
59 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.58 0.32 -0.35
60 AT5G23680 Sterile alpha motif (SAM) domain-containing protein -0.58 0.29 -0.29
61 AT4G35550 WUSCHEL related homeobox 13 ATWOX13, HB-4, WUSCHEL related
homeobox 13		 -0.58 0.36 -0.31
62 AT4G38900 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.58 0.34 -0.31
63 ATCG01040 Cytochrome C assembly protein YCF5 -0.58 0.34 -0.3
64 AT3G44560 fatty acid reductase 8 fatty acid reductase 8 -0.58 0.3 -0.31
65 ATCG00630 PSAJ PSAJ -0.57 0.3 -0.3
66 AT1G22860 Vacuolar sorting protein 39 -0.57 0.31 -0.31
67 AT2G10050 transposable element gene -0.57 0.31 -0.3
68 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 -0.57 0.32 -0.29
69 AT2G42370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58110.2); Has 205 Blast hits
to 191 proteins in 60 species: Archae - 3; Bacteria - 23;
Metazoa - 73; Fungi - 8; Plants - 34; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 -0.57 0.31 -0.32
70 AT1G11990 O-fucosyltransferase family protein -0.56 0.32 -0.3
71 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.56 0.31 -0.32
72 AT3G30845 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.31 -0.33
73 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 -0.55 0.33 -0.3
74 AT3G06210 ARM repeat superfamily protein -0.55 0.32 -0.33
75 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.55 0.3 -0.32
76 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 -0.55 0.32 -0.31
77 AT2G10900 transposable element gene -0.55 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
78 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - 0.75 0.51 -0.49 C0241