AT3G56240 : copper chaperone
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G56240
Description copper chaperone
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56240 copper chaperone copper chaperone 1 0.32 -0.31
2 AT3G11930 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.76 0.31 -0.32
3 AT1G69010 BES1-interacting Myc-like protein 2 BES1-interacting Myc-like protein
2		 0.73 0.31 -0.32
4 AT2G15695 Protein of unknown function DUF829, transmembrane 53 0.73 0.33 -0.34
5 AT4G32630 ArfGap/RecO-like zinc finger domain-containing protein 0.7 0.33 -0.31
6 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 0.69 0.34 -0.31
7 AT1G11930 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 0.69 0.32 -0.33
8 AT1G14570 UBX domain-containing protein 0.66 0.31 -0.3
9 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 0.66 0.29 -0.31
10 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING 0.66 0.32 -0.34
11 AT2G40880 cystatin A cystatin A, cystatin A, FL3-27 0.66 0.33 -0.33
12 AT5G66160 receptor homology region transmembrane domain ring H2 motif
protein 1		 ARABIDOPSIS THALIANA RECEPTOR
HOMOLOGY REGION TRANSMEMBRANE
DOMAIN RING H2 MOTIF PROTEIN 1,
receptor homology region
transmembrane domain ring H2 motif
protein 1		 0.66 0.31 -0.32
13 AT2G02760 ubiquiting-conjugating enzyme 2 ubiquiting-conjugating enzyme 2,
ubiquitin-conjugating enzyme 2,
ubiquiting-conjugating enzyme 2		 0.66 0.32 -0.3
14 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6		 0.66 0.33 -0.34
15 AT1G14200 RING/U-box superfamily protein 0.66 0.32 -0.32
16 AT4G20770 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.31 -0.33
17 AT5G38220 alpha/beta-Hydrolases superfamily protein 0.65 0.32 -0.33
18 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 0.64 0.31 -0.32
19 AT3G60590 unknown protein; LOCATED IN: chloroplast, chloroplast inner
membrane, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G48460.1); Has 81 Blast hits to 81 proteins in 19
species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.64 0.31 -0.31
20 AT3G61840 Protein of unknown function (DUF688) 0.64 0.31 -0.31
21 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 -0.64 0.31 -0.33
22 AT1G49030 PLAC8 family protein -0.64 0.3 -0.3
23 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 0.64 0.29 -0.3
24 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.31 -0.32
25 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 0.63 0.31 -0.33
26 AT2G35920 RNA helicase family protein -0.63 0.32 -0.32
27 AT1G51690 protein phosphatase 2A 55 kDa regulatory subunit B alpha
isoform		 protein phosphatase 2A 55 kDa
regulatory subunit B alpha
isoform, protein phosphatase 2A 55
kDa regulatory subunit B alpha
isoform		 0.63 0.31 -0.32
28 AT1G06060 LisH and RanBPM domains containing protein 0.63 0.32 -0.31
29 AT5G42830 HXXXD-type acyl-transferase family protein -0.62 0.31 -0.31
30 AT3G47590 alpha/beta-Hydrolases superfamily protein 0.62 0.31 -0.32
31 AT1G55200 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.62 0.32 -0.33
32 AT3G51520 diacylglycerol acyltransferase family 0.62 0.3 -0.33
33 AT2G21240 basic pentacysteine 4 BASIC PENTACYSTEINE 4, BBR, basic
pentacysteine 4		 0.62 0.31 -0.33
34 AT2G17300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast
hits to 42 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.32 -0.33
35 AT2G32280 Protein of unknown function (DUF1218) -0.62 0.3 -0.3
36 AT1G21870 golgi nucleotide sugar transporter 5 golgi nucleotide sugar transporter
5		 0.62 0.32 -0.31
37 AT1G33790 jacalin lectin family protein -0.61 0.29 -0.32
38 AT5G61865 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.29 -0.31
39 AT1G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15620.1); Has 154 Blast hits
to 146 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.32
40 AT3G57810 Cysteine proteinases superfamily protein 0.61 0.31 -0.31
41 AT1G09940 Glutamyl-tRNA reductase family protein HEMA2 -0.61 0.29 -0.29
42 AT3G26870 Plant self-incompatibility protein S1 family -0.61 0.32 -0.33
43 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO -0.6 0.32 -0.3
44 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.32
45 AT4G38210 expansin A20 ATEXP20, expansin A20, ATHEXP
ALPHA 1.23, EXPANSIN 20, expansin
A20		 -0.6 0.35 -0.33
46 AT5G61310 Cytochrome c oxidase subunit Vc family protein -0.59 0.33 -0.31
47 AT5G02070 Protein kinase family protein -0.59 0.3 -0.31
48 AT1G56710 Pectin lyase-like superfamily protein 0.59 0.35 -0.32
49 AT1G31440 SH3 domain-containing protein 0.59 0.32 -0.32
50 AT2G42040 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has
219 Blast hits to 219 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.59 0.31 -0.33
51 AT5G39360 EID1-like 2 EID1-like 2 0.59 0.3 -0.33
52 AT4G27680 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.59 0.3 -0.33
53 AT1G20850 xylem cysteine peptidase 2 xylem cysteine peptidase 2 0.59 0.32 -0.32
54 AT5G05290 expansin A2 ATEXP2, expansin A2, ATHEXP ALPHA
1.12, EXPANSIN 2, expansin A2		 -0.58 0.32 -0.32
55 AT2G25070 Protein phosphatase 2C family protein 0.58 0.33 -0.29
56 AT4G02300 Plant invertase/pectin methylesterase inhibitor superfamily -0.58 0.32 -0.32
57 AT5G64905 elicitor peptide 3 precursor elicitor peptide 3 precursor -0.58 0.32 -0.33
58 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 -0.58 0.31 -0.32
59 AT5G24400 NagB/RpiA/CoA transferase-like superfamily protein EMBRYO DEFECTIVE 2024,
6-PHOSPHOGLUCONOLACTONASE 3		 0.58 0.31 -0.34
60 AT2G38110 glycerol-3-phosphate acyltransferase 6 GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 6,
glycerol-3-phosphate
acyltransferase 6		 0.58 0.32 -0.3
61 AT5G01310 APRATAXIN-like APRATAXIN-like -0.58 0.3 -0.31
62 AT3G18230 Octicosapeptide/Phox/Bem1p family protein -0.57 0.3 -0.32
63 AT1G79890 RAD3-like DNA-binding helicase protein -0.57 0.34 -0.33
64 AT2G33320 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.56 0.3 -0.32
65 AT5G10220 annexin 6 annexin 6, ANNEXIN ARABIDOPSIS
THALIANA 6		 -0.56 0.32 -0.32
66 AT4G26110 nucleosome assembly protein1;1 ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMLY PROTEIN 1;1, nucleosome
assembly protein1;1		 -0.56 0.31 -0.31
67 AT2G24450 FASCICLIN-like arabinogalactan protein 3 precursor FASCICLIN-like arabinogalactan
protein 3 precursor		 -0.55 0.31 -0.31
68 AT1G72090 Methylthiotransferase -0.55 0.32 -0.31
69 AT2G19600 K+ efflux antiporter 4 K+ efflux antiporter 4, KEA4, K+
efflux antiporter 4		 -0.55 0.31 -0.31
70 AT2G25560 DNAJ heat shock N-terminal domain-containing protein -0.54 0.31 -0.32
71 AT1G36600 transposable element gene -0.54 0.32 -0.32
72 AT3G16490 IQ-domain 26 IQ-domain 26 -0.54 0.3 -0.3
73 AT5G65630 global transcription factor group E7 global transcription factor group
E7		 -0.53 0.33 -0.31
74 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 -0.53 0.33 -0.31
75 AT3G06340 DNAJ heat shock N-terminal domain-containing protein -0.53 0.32 -0.31
76 AT1G50420 scarecrow-like 3 SCARECROW-LIKE 3, scarecrow-like 3 -0.53 0.3 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0026 2-Hydroxyisobutyric acid - - β oxidation 0.82 0.47 -0.43
78 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		0.75 0.44 -0.44 C0027
79 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		0.65 0.43 -0.46 C0087