AT3G56170 : Ca-2+ dependent nuclease
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G56170
Description Ca-2+ dependent nuclease
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56170 Ca-2+ dependent nuclease Ca-2+ dependent nuclease 1 0.32 -0.3
2 AT5G13330 related to AP2 6l related to AP2 6l 0.83 0.32 -0.3
3 AT3G01970 WRKY DNA-binding protein 45 WRKY DNA-BINDING PROTEIN 45, WRKY
DNA-binding protein 45		 0.82 0.31 -0.32
4 AT1G28520 vascular plant one zinc finger protein VASCULAR PLANT ONE ZINC FINGER
PROTEIN, vascular plant one zinc
finger protein		 0.8 0.3 -0.35
5 AT4G39955 alpha/beta-Hydrolases superfamily protein 0.8 0.31 -0.32
6 AT3G04070 NAC domain containing protein 47 NAC domain containing protein 47,
NAC domain containing protein 47		 0.79 0.32 -0.32
7 AT3G04010 O-Glycosyl hydrolases family 17 protein 0.79 0.34 -0.3
8 AT4G04620 Ubiquitin-like superfamily protein autophagy 8b 0.78 0.32 -0.31
9 AT5G14780 formate dehydrogenase formate dehydrogenase 0.78 0.31 -0.31
10 AT4G34230 cinnamyl alcohol dehydrogenase 5 cinnamyl alcohol dehydrogenase 5,
cinnamyl alcohol dehydrogenase 5,
cinnamyl alcohol dehydrogenase 5		 0.76 0.31 -0.34
11 AT1G04990 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.75 0.31 -0.34
12 AT3G18280 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.75 0.3 -0.32
13 AT5G12010 unknown protein; INVOLVED IN: response to salt stress;
LOCATED IN: chloroplast, plasma membrane, membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.75 0.33 -0.32
14 AT3G57830 Leucine-rich repeat protein kinase family protein -0.75 0.29 -0.31
15 AT4G00480 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ATMYC1, myc1 -0.74 0.35 -0.32
16 AT4G24690 ubiquitin-associated (UBA)/TS-N domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein		 Arabidopsis thaliana next to BRCA1
gene 1, next to BRCA1 gene 1		 0.74 0.33 -0.3
17 AT1G66250 O-Glycosyl hydrolases family 17 protein -0.74 0.31 -0.32
18 AT4G38370 Phosphoglycerate mutase family protein -0.73 0.33 -0.32
19 AT1G77380 amino acid permease 3 amino acid permease 3, ATAAP3 0.73 0.31 -0.31
20 AT4G28390 ADP/ATP carrier 3 ADP/ATP carrier 3, ATAAC3 0.73 0.28 -0.32
21 AT1G34370 C2H2 and C2HC zinc fingers superfamily protein sensitive to proton rhizotoxicity
1		 0.73 0.34 -0.3
22 AT2G16790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.32 -0.33
23 AT5G51550 EXORDIUM like 3 EXORDIUM like 3 -0.73 0.32 -0.31
24 AT5G64440 fatty acid amide hydrolase fatty acid amide hydrolase, fatty
acid amide hydrolase		 0.72 0.33 -0.3
25 AT4G21980 Ubiquitin-like superfamily protein AUTOPHAGY 8A, AUTOPHAGY-RELATED 8A 0.72 0.32 -0.3
26 AT2G16710 Iron-sulphur cluster biosynthesis family protein 0.72 0.31 -0.3
27 AT3G51890 Clathrin light chain protein 0.72 0.32 -0.33
28 AT5G50740 Heavy metal transport/detoxification superfamily protein -0.72 0.3 -0.31
29 AT4G38660 Pathogenesis-related thaumatin superfamily protein -0.71 0.32 -0.33
30 AT3G54720 Peptidase M28 family protein ALTERED MERISTEM PROGRAM 1,
CONSTITUTIVE MORPHOGENESIS 2,
HAUPTLING, Multifolia, PRIMORDIA
TIMING		 -0.7 0.34 -0.33
31 AT5G39590 TLD-domain containing nucleolar protein 0.7 0.3 -0.32
32 AT1G77810 Galactosyltransferase family protein 0.7 0.29 -0.31
33 AT2G35470 unknown protein; Has 25 Blast hits to 25 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.31 -0.32
34 AT2G19620 N-MYC downregulated-like 3 N-MYC downregulated-like 3 -0.7 0.32 -0.31
35 AT3G23890 topoisomerase II ATTOPII, topoisomerase II -0.7 0.33 -0.3
36 AT3G26290 cytochrome P450, family 71, subfamily B, polypeptide 26 cytochrome P450, family 71,
subfamily B, polypeptide 26		 0.7 0.31 -0.31
37 AT1G68400 leucine-rich repeat transmembrane protein kinase family
protein		 -0.69 0.31 -0.29
38 AT2G21180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits
to 124 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.31 -0.31
39 AT4G35920 PLAC8 family protein mid1-complementing activity 1 -0.69 0.32 -0.3
40 AT3G04630 WVD2-like 1 WVD2-like 1 -0.69 0.32 -0.29
41 AT4G28250 expansin B3 expansin B3, ATHEXP BETA 1.6,
expansin B3		 -0.69 0.33 -0.31
42 AT4G29080 phytochrome-associated protein 2 indole-3-acetic acid inducible 27,
phytochrome-associated protein 2		 -0.69 0.31 -0.28
43 AT5G06960 OCS-element binding factor 5 OCS-element binding factor 5,
TGACG MOTIF-BINDING FACTOR 5		 0.69 0.33 -0.3
44 AT5G16250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.69 0.34 -0.32
45 AT5G39610 NAC domain containing protein 6 Arabidopsis NAC domain containing
protein 92, NAC domain containing
protein 2, NAC domain containing
protein 6, NAC domain containing
protein 2, NAC domain containing
protein 6, ORESARA 1		 0.69 0.34 -0.32
46 AT1G30640 Protein kinase family protein 0.68 0.33 -0.32
47 AT2G46780 RNA-binding (RRM/RBD/RNP motifs) family protein -0.68 0.29 -0.33
48 AT1G61450 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G61415.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.68 0.34 -0.33
49 AT4G30400 RING/U-box superfamily protein -0.68 0.29 -0.28
50 AT4G37750 Integrase-type DNA-binding superfamily protein AINTEGUMENTA, CKC, COMPLEMENTING A
PROTEIN KINASE C MUTANT 1, DRAGON		 -0.68 0.33 -0.32
51 AT3G15990 sulfate transporter 3;4 sulfate transporter 3;4 0.68 0.3 -0.29
52 AT3G47510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.67 0.32 -0.32
53 AT1G69770 chromomethylase 3 chromomethylase 3 -0.67 0.31 -0.3
54 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 0.67 0.32 -0.29
55 AT1G69310 WRKY DNA-binding protein 57 ATWRKY57, WRKY DNA-binding protein
57		 0.67 0.32 -0.33
56 AT2G24440 selenium binding -0.67 0.3 -0.31
57 AT1G66340 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 AtETR1, ETHYLENE INSENSITIVE 1,
ETHYLENE RESPONSE, ETHYLENE
RESPONSE 1		 0.67 0.32 -0.33
58 AT4G16440 ferredoxin hydrogenases 0.67 0.33 -0.33
59 AT2G27150 abscisic aldehyde oxidase 3 abscisic aldehyde oxidase 3,
Aldehyde oxidase delta,
Arabidopsis thaliana aldehyde
oxidase 3, AtAAO3		 0.67 0.34 -0.32
60 AT1G70370 polygalacturonase 2 polygalacturonase 2 -0.67 0.32 -0.3
61 AT1G79450 ALA-interacting subunit 5 ALA-interacting subunit 5 0.67 0.32 -0.31
62 AT3G55420 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.3
63 AT5G14000 NAC domain containing protein 84 NAC domain containing protein 84,
NAC domain containing protein 84		 0.67 0.33 -0.31
64 AT4G05190 kinesin 5 kinesin 5 -0.67 0.34 -0.33
65 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 0.67 0.33 -0.31
66 AT2G45210 SAUR-like auxin-responsive protein family 0.66 0.3 -0.32
67 AT4G14330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.66 0.3 -0.28
68 AT1G65420 Protein of unknown function (DUF565) NONPHOTOCHEMICAL QUENCHING 7 -0.66 0.34 -0.33
69 AT4G12440 adenine phosphoribosyl transferase 4 adenine phosphoribosyl transferase
4		 -0.66 0.3 -0.35
70 AT4G02380 senescence-associated gene 21 Arabidopsis thaliana late
embryogenensis abundant like 5,
senescence-associated gene 21		 0.66 0.32 -0.32
71 AT4G24040 trehalase 1 ATTRE1, trehalase 1 0.66 0.32 -0.3
72 AT5G04910 unknown protein; Has 71 Blast hits to 71 proteins in 36
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.66 0.32 -0.31
73 AT5G40610 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 -0.65 0.32 -0.32
74 AT3G17350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.31 -0.32
75 AT1G76740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G76840.1); Has 3683 Blast hits
to 2942 proteins in 407 species: Archae - 9; Bacteria -
440; Metazoa - 1472; Fungi - 269; Plants - 192; Viruses -
8; Other Eukaryotes - 1293 (source: NCBI BLink).		 -0.65 0.32 -0.32
76 AT3G57160 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.31 -0.29
77 AT2G37790 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C10		 -0.64 0.31 -0.3
78 AT5G07690 myb domain protein 29 myb domain protein 29, myb domain
protein 29, PRODUCTION OF
METHIONINE-DERIVED GLUCOSINOLATE 2		 -0.64 0.3 -0.34
79 AT1G27285 transposable element gene -0.63 0.3 -0.31
80 AT5G58300 Leucine-rich repeat protein kinase family protein -0.63 0.33 -0.3
81 AT5G16530 Auxin efflux carrier family protein PIN-FORMED 5 -0.62 0.32 -0.28
82 AT2G36660 poly(A) binding protein 7 poly(A) binding protein 7 -0.62 0.32 -0.33
83 AT5G19260 Protein of unknown function (DUF3049) FANTASTIC FOUR 3 -0.62 0.3 -0.32
84 AT2G15740 C2H2-like zinc finger protein -0.62 0.35 -0.29
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
85 C0171 MST_2182.9 - - - -0.72 0.44 -0.46
86 C0183 MST_3033.1 - - - -0.7 0.46 -0.51