AT3G56070 : rotamase cyclophilin 2
Query Information
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AGICode AT3G56070
Description rotamase cyclophilin 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 1 0.3 -0.32
2 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog 0.88 0.29 -0.33
3 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 0.87 0.33 -0.3
4 AT4G30840 Transducin/WD40 repeat-like superfamily protein 0.87 0.31 -0.32
5 AT3G13230 RNA-binding KH domain-containing protein 0.87 0.31 -0.34
6 AT4G10620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.86 0.31 -0.29
7 AT3G06700 Ribosomal L29e protein family 0.86 0.32 -0.28
8 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.85 0.31 -0.31
9 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 0.84 0.34 -0.32
10 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.84 0.32 -0.33
11 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.3 -0.32
12 AT2G37990 ribosome biogenesis regulatory protein (RRS1) family
protein		 0.83 0.32 -0.32
13 AT1G80750 Ribosomal protein L30/L7 family protein 0.83 0.36 -0.32
14 AT3G23620 Ribosomal RNA processing Brix domain protein 0.83 0.32 -0.32
15 AT1G61570 translocase of the inner mitochondrial membrane 13 translocase of the inner
mitochondrial membrane 13		 0.83 0.32 -0.32
16 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 0.83 0.32 -0.31
17 AT4G15770 RNA binding 0.83 0.31 -0.32
18 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.83 0.32 -0.31
19 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.83 0.29 -0.32
20 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 0.82 0.3 -0.29
21 AT4G28450 nucleotide binding;protein binding 0.82 0.35 -0.3
22 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.82 0.29 -0.3
23 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.82 0.33 -0.3
24 AT2G25355 PNAS-3 related 0.82 0.33 -0.31
25 AT1G64880 Ribosomal protein S5 family protein 0.82 0.29 -0.28
26 AT3G22660 rRNA processing protein-related 0.82 0.33 -0.32
27 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.82 0.31 -0.31
28 AT5G62440 Protein of unknown function (DUF3223) 0.82 0.31 -0.32
29 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.81 0.29 -0.31
30 AT5G22440 Ribosomal protein L1p/L10e family 0.81 0.31 -0.32
31 AT3G57490 Ribosomal protein S5 family protein 0.81 0.31 -0.32
32 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.32 -0.29
33 AT3G02190 Ribosomal protein L39 family protein 0.81 0.33 -0.32
34 AT5G19300 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Protein of unknown
function DUF171 (InterPro:IPR003750); Has 3649 Blast hits
to 1964 proteins in 291 species: Archae - 113; Bacteria -
121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses -
4; Other Eukaryotes - 1703 (source: NCBI BLink).		 0.81 0.31 -0.3
35 AT2G40360 Transducin/WD40 repeat-like superfamily protein 0.81 0.3 -0.35
36 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B 0.81 0.3 -0.3
37 AT1G75670 DNA-directed RNA polymerases 0.8 0.3 -0.33
38 AT2G14460 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.8 0.31 -0.32
39 AT1G06380 Ribosomal protein L1p/L10e family 0.8 0.31 -0.3
40 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 0.8 0.3 -0.31
41 AT3G49180 Transducin/WD40 repeat-like superfamily protein ROOT INITIATION DEFECTIVE 3 0.8 0.32 -0.32
42 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.8 0.3 -0.31
43 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.79 0.29 -0.33
44 AT1G52930 Ribosomal RNA processing Brix domain protein 0.79 0.31 -0.31
45 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.79 0.3 -0.3
46 AT5G49560 Putative methyltransferase family protein 0.79 0.31 -0.33
47 AT2G40660 Nucleic acid-binding, OB-fold-like protein 0.79 0.32 -0.3
48 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.79 0.31 -0.32
49 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.79 0.3 -0.31
50 AT1G50920 Nucleolar GTP-binding protein 0.79 0.32 -0.3
51 AT5G06550 CONTAINS InterPro DOMAIN/s: Transcription factor
jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347),
F-box domain, Skp2-like (InterPro:IPR022364), Transcription
factor jumonji (InterPro:IPR013129); BEST Arabidopsis
thaliana protein match is: transferases, transferring
glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to
1747 proteins in 292 species: Archae - 0; Bacteria - 297;
Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink).		 0.79 0.31 -0.32
52 AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain		 0.79 0.31 -0.29
53 AT2G19385 zinc ion binding 0.79 0.31 -0.33
54 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 0.79 0.3 -0.32
55 AT1G74270 Ribosomal protein L35Ae family protein 0.79 0.3 -0.3
56 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.31 -0.3
57 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 0.78 0.33 -0.31
58 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.78 0.31 -0.31
59 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.78 0.29 -0.34
60 AT4G13530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.78 0.32 -0.3
61 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B 0.78 0.32 -0.3
62 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein 0.78 0.3 -0.32
63 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein -0.78 0.32 -0.35
64 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 0.78 0.29 -0.3
65 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 0.78 0.29 -0.32
66 AT1G18800 NAP1-related protein 2 NAP1-related protein 2 0.78 0.32 -0.31
67 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein 0.78 0.32 -0.32
68 AT3G53960 Major facilitator superfamily protein -0.77 0.31 -0.31
69 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.77 0.35 -0.31
70 AT2G39795 Mitochondrial glycoprotein family protein 0.77 0.33 -0.31
71 AT1G04900 Protein of unknown function (DUF185) 0.77 0.3 -0.31
72 AT2G32220 Ribosomal L27e protein family 0.77 0.31 -0.32
73 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.77 0.33 -0.31
74 AT5G02050 Mitochondrial glycoprotein family protein 0.77 0.31 -0.33
75 AT1G80270 PENTATRICOPEPTIDE REPEAT 596 PENTATRICOPEPTIDE REPEAT 596 0.77 0.31 -0.32
76 AT2G20920 Protein of unknown function (DUF3353) -0.77 0.32 -0.34
77 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.77 0.32 -0.3
78 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 -0.77 0.3 -0.31
79 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 -0.76 0.31 -0.33
80 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.31 -0.32
81 AT3G14067 Subtilase family protein -0.75 0.3 -0.31
82 AT3G06780 glycine-rich protein -0.75 0.31 -0.31
83 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.75 0.3 -0.3
84 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.75 0.33 -0.33
85 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.75 0.3 -0.34
86 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.32 -0.31
87 AT2G40420 Transmembrane amino acid transporter family protein -0.74 0.33 -0.32
88 AT3G19620 Glycosyl hydrolase family protein -0.74 0.32 -0.3
89 AT5G02310 proteolysis 6 proteolysis 6 -0.74 0.31 -0.3
90 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 -0.74 0.32 -0.31
91 AT1G01240 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 11 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16
species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.74 0.29 -0.35
92 AT5G19140 Aluminium induced protein with YGL and LRDR motifs AILP1, ATAILP1 -0.73 0.33 -0.31
93 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 -0.73 0.32 -0.33
94 AT1G78680 gamma-glutamyl hydrolase 2 gamma-glutamyl hydrolase 2,
gamma-glutamyl hydrolase 2		 -0.73 0.32 -0.33
95 AT2G32800 protein kinase family protein AP4.3A -0.72 0.32 -0.29
96 AT1G55280 Lipase/lipooxygenase, PLAT/LH2 family protein -0.72 0.31 -0.31
97 AT5G65840 Thioredoxin superfamily protein -0.72 0.31 -0.3
98 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.72 0.31 -0.31
99 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 -0.71 0.32 -0.32
100 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.71 0.32 -0.31
101 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c -0.71 0.3 -0.3
102 AT1G73740 UDP-Glycosyltransferase superfamily protein -0.71 0.31 -0.32
103 AT3G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits
to 20 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.29 -0.32
104 AT1G70210 CYCLIN D1;1 ATCYCD1;1, CYCLIN D1;1 -0.71 0.32 -0.31
105 AT1G11930 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 -0.7 0.34 -0.32
106 AT1G66900 alpha/beta-Hydrolases superfamily protein -0.7 0.31 -0.33
107 AT1G22710 sucrose-proton symporter 2 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 2,
sucrose-proton symporter 2,
SUCROSE TRANSPORTER 1		 -0.7 0.32 -0.31
108 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.32 -0.31
109 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 -0.69 0.32 -0.33
110 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.69 0.3 -0.31
111 AT5G05230 RING/U-box superfamily protein -0.69 0.31 -0.32
112 AT4G15440 hydroperoxide lyase 1 CYP74B2, hydroperoxide lyase 1 -0.69 0.31 -0.31
113 AT5G57350 H(+)-ATPase 3 H(+)-ATPase 3, ARABIDOPSIS
THALIANA ARABIDOPSIS H(+)-ATPASE,
H(+)-ATPase 3		 -0.69 0.32 -0.3
114 AT3G54360 zinc ion binding -0.69 0.31 -0.32
115 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.68 0.33 -0.34
116 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.31 -0.32
117 AT3G14050 RELA/SPOT homolog 2 RELA-SPOT HOMOLOG 2, RELA/SPOT
HOMOLOG 2, RELA/SPOT homolog 2		 -0.68 0.34 -0.3
118 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 -0.68 0.31 -0.31
119 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.32 -0.32
120 AT5G01200 Duplicated homeodomain-like superfamily protein -0.67 0.3 -0.3
121 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.67 0.31 -0.32
122 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.67 0.31 -0.32
123 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.67 0.31 -0.34
124 AT5G14510 ARM repeat superfamily protein -0.67 0.29 -0.32
125 AT5G66050 Wound-responsive family protein -0.67 0.3 -0.31
126 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.66 0.29 -0.31
127 AT2G42750 DNAJ heat shock N-terminal domain-containing protein -0.66 0.33 -0.32
128 AT1G50020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 72 Blast hits to 72 proteins in 27 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.3
129 AT3G56050 Protein kinase family protein -0.66 0.32 -0.31
130 AT2G15960 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.33
131 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 -0.65 0.3 -0.32
132 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.65 0.31 -0.32
133 AT5G19420 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 -0.65 0.3 -0.33
134 AT1G37000 Beta-galactosidase related protein -0.65 0.34 -0.31
135 AT5G20900 jasmonate-zim-domain protein 12 jasmonate-zim-domain protein 12,
TIFY3B		 -0.65 0.31 -0.29
136 AT1G78890 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.34 -0.32
137 AT2G20770 GCR2-like 2 GCR2-like 2 -0.65 0.31 -0.32
138 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.65 0.31 -0.32
139 AT3G61970 AP2/B3-like transcriptional factor family protein NGATHA2 -0.65 0.32 -0.32
140 AT5G43600 ureidoglycolate amidohydrolase ARABIDOPSIS THALIANA ALLANTOATE
AMIDOHYDROLASE 2, ureidoglycolate
amidohydrolase		 -0.65 0.28 -0.32
141 AT1G17790 DNA-binding bromodomain-containing protein -0.65 0.3 -0.32