AT3G55670 : -
Query Information
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AGICode AT3G55670
Description CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 400 Blast hits to 249 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 400; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G55670 CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),
FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana
protein match is: F-box/RNI-like/FBD-like
domains-containing protein (TAIR:AT3G52680.2); Has 400
Blast hits to 249 proteins in 3 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 400; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 1 0.31 -0.33
2 AT5G02740 Ribosomal protein S24e family protein 0.73 0.32 -0.31
3 AT5G17950 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.32 -0.3
4 AT5G62500 end binding protein 1B ATEB1, END BINDING PROTEIN 1B, end
binding protein 1B		 0.62 0.3 -0.31
5 AT2G45640 SIN3 associated polypeptide P18 SIN3 ASSOCIATED POLYPEPTIDE 18,
SIN3 associated polypeptide P18		 0.6 0.33 -0.31
6 AT5G50480 nuclear factor Y, subunit C6 nuclear factor Y, subunit C6 -0.57 0.33 -0.29
7 AT2G28700 AGAMOUS-like 46 AGAMOUS-like 46 0.57 0.31 -0.31
8 AT2G43700 Concanavalin A-like lectin protein kinase family protein -0.56 0.34 -0.33
9 AT3G45320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G60330.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.56 0.3 -0.32
10 AT2G26940 C2H2-type zinc finger family protein 0.56 0.34 -0.32
11 AT5G37880 transposable element gene 0.56 0.32 -0.29
12 AT4G25840 glycerol-3-phosphatase 1 glycerol-3-phosphatase 1 0.55 0.31 -0.3
13 AT4G07780 transposable element gene 0.55 0.3 -0.34
14 AT1G70910 RING/U-box superfamily protein DESPIERTO 0.54 0.31 -0.31
15 AT4G34870 rotamase cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
1, rotamase cyclophilin 5		 0.54 0.31 -0.31
16 AT3G50580 LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl,
sepal, flower; EXPRESSED DURING: petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: ECA1 gametogenesis related family protein
(TAIR:AT1G44191.1); Has 132049 Blast hits to 55074 proteins
in 2314 species: Archae - 393; Bacteria - 25609; Metazoa -
44661; Fungi - 17591; Plants - 17316; Viruses - 4153; Other
Eukaryotes - 22326 (source: NCBI BLink).		 0.54 0.32 -0.33
17 AT1G14550 Peroxidase superfamily protein -0.54 0.32 -0.34
18 AT1G62680 Pentatricopeptide repeat (PPR) superfamily protein -0.54 0.31 -0.33
19 AT2G26810 Putative methyltransferase family protein 0.54 0.3 -0.33
20 AT2G47300 ribonuclease Ps 0.54 0.3 -0.3
21 AT5G03530 RAB GTPase homolog C2A ATRAB, ATRAB ALPHA, ATRAB18B,
ARABIDOPSIS THALIANA RAB GTPASE
HOMOLOG C2A, RAB GTPase homolog
C2A		 0.53 0.32 -0.33
22 AT1G43870 transposable element gene 0.53 0.32 -0.32
23 AT3G18570 Oleosin family protein -0.52 0.34 -0.33
24 AT4G00720 shaggy-like protein kinase 32 SHAGGY-LIKE PROTEIN KINASE THETA,
shaggy-like protein kinase 32,
shaggy-like protein kinase 32		 -0.49 0.33 -0.31
25 AT3G55780 Glycosyl hydrolase superfamily protein -0.49 0.31 -0.32
26 AT3G12830 SAUR-like auxin-responsive protein family -0.48 0.33 -0.32
27 AT3G31910 Domain of unknown function (DUF1985) -0.47 0.3 -0.31
28 AT1G26990 transposable element gene -0.46 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
29 C0101 Glutamic acid D,L-Glutamic acid L-Glutamate; D-Glutamate tyrosine biosynthesis I,
serine biosynthesis,
tyrosine degradation I,
uridine-5'-phosphate biosynthesis,
proline biosynthesis III,
glutamate biosynthesis V,
glycine biosynthesis,
lysine biosynthesis VI,
leucine biosynthesis,
UDP-N-acetyl-D-glucosamine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle (plant pathway),
L-Ndelta-acetylornithine biosynthesis,
tryptophan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
4-hydroxyphenylpyruvate biosynthesis,
proline degradation II,
photorespiration,
5-aminoimidazole ribonucleotide biosynthesis I,
folate polyglutamylation,
ammonia assimilation cycle II,
arginine degradation VI (arginase 2 pathway),
asparagine biosynthesis III (tRNA-dependent),
tetrahydrofolate biosynthesis II,
glutamine biosynthesis III,
valine degradation I,
glucosinolate biosynthesis from dihomomethionine,
phenylalanine biosynthesis II,
citrulline biosynthesis,
gamma-glutamyl cycle,
indole-3-acetyl-amino acid biosynthesis,
purine nucleotides de novo biosynthesis II,
IAA biosynthesis I,
NAD biosynthesis I (from aspartate),
alanine biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
glucosinolate biosynthesis from homomethionine,
phenylalanine degradation III,
ornithine biosynthesis,
glutathione-mediated detoxification II,
pyrimidine ribonucleotides interconversion,
indole glucosinolate breakdown (active in intact plant cell),
aspartate degradation II,
glucosinolate biosynthesis from trihomomethionine,
glucosinolate biosynthesis from tetrahomomethionine,
L-glutamine biosynthesis II (tRNA-dependent),
camalexin biosynthesis,
glutathione biosynthesis,
aspartate biosynthesis,
leucine degradation I,
glutathione degradation,
pyridine nucleotide cycling (plants),
glutamate degradation I,
valine biosynthesis,
glucosinolate biosynthesis from tryptophan,
arginine biosynthesis II (acetyl cycle),
isoleucine biosynthesis I (from threonine),
arginine biosynthesis I,
arginine degradation I (arginase pathway),
glucosinolate biosynthesis from hexahomomethionine,
tetrapyrrole biosynthesis I,
alanine degradation III,
pyridoxal 5'-phosphate biosynthesis II,
glutamate biosynthesis IV,
glutamate degradation IV,
asparagine biosynthesis I,
histidine biosynthesis,
lysine degradation II,
pantothenate biosynthesis,
isoleucine degradation I,
folate polyglutamylation II,
glutamine biosynthesis I,
glucosinolate biosynthesis from phenylalanine,
tyrosine biosynthesis II,
nitrate reduction II (assimilatory),
alanine degradation II (to D-lactate) 		-0.48 0.33 -0.31 C0101
30 C0060 Asparagine D,L-Asparagine L-Asparagine asparagine degradation I,
asparagine biosynthesis III (tRNA-dependent),
asparagine biosynthesis I,
tRNA charging,
cyanide detoxification II 		-0.46 0.32 -0.32 C0060