AT3G55950 : ATCRR3
Query Information
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AGICode AT3G55950
Description CRINKLY4 related 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G55950 CRINKLY4 related 3 ATCRR3, CRINKLY4 related 3 1 0.32 -0.3
2 AT5G55930 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 1, oligopeptide
transporter 1		 0.84 0.31 -0.31
3 AT1G28280 VQ motif-containing protein 0.84 0.33 -0.32
4 AT1G17620 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.8 0.34 -0.3
5 AT2G20760 Clathrin light chain protein 0.8 0.32 -0.34
6 AT5G17640 Protein of unknown function (DUF1005) 0.78 0.32 -0.31
7 AT5G11680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, plasma
membrane; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
WW-domain-binding protein (InterPro:IPR018826); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.78 0.32 -0.31
8 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 0.78 0.33 -0.31
9 AT5G56170 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 LORELEI-LIKE-GPI-ANCHORED PROTEIN
1		 0.77 0.31 -0.32
10 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 0.77 0.3 -0.32
11 AT2G43790 MAP kinase 6 MAP kinase 6, MAP kinase 6, MAP
kinase 6, MAP kinase 6		 0.77 0.33 -0.31
12 AT2G38610 RNA-binding KH domain-containing protein 0.77 0.3 -0.32
13 AT1G54090 exocyst subunit exo70 family protein D2 exocyst subunit exo70 family
protein D2, exocyst subunit exo70
family protein D2		 0.77 0.32 -0.31
14 AT1G11310 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 2,
MILDEW RESISTANCE LOCUS O 2,
POWDERY MILDEW RESISTANT 2		 0.77 0.31 -0.3
15 AT2G31090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.77 0.32 -0.32
16 AT4G15800 ralf-like 33 ralf-like 33 0.77 0.34 -0.3
17 AT5G13000 glucan synthase-like 12 glucan synthase-like 12, callose
synthase 3, gsl12, glucan
synthase-like 12		 -0.76 0.32 -0.31
18 AT5G35080 INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Mannose-6-phosphate receptor, binding
(InterPro:IPR009011), Glucosidase II beta subunit-like
(InterPro:IPR012913); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.76 0.33 -0.3
19 AT1G25370 Protein of unknown function (DUF1639) 0.76 0.33 -0.3
20 AT1G54500 Rubredoxin-like superfamily protein -0.76 0.31 -0.29
21 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 0.76 0.3 -0.33
22 AT3G14780 CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant
(InterPro:IPR004252); BEST Arabidopsis thaliana protein
match is: glucan synthase-like 4 (TAIR:AT3G14570.2); Has
315 Blast hits to 313 proteins in 50 species: Archae - 2;
Bacteria - 16; Metazoa - 11; Fungi - 7; Plants - 181;
Viruses - 2; Other Eukaryotes - 96 (source: NCBI BLink).		 0.76 0.32 -0.32
23 AT3G50130 Plant protein of unknown function (DUF247) 0.75 0.34 -0.32
24 AT5G19100 Eukaryotic aspartyl protease family protein 0.75 0.31 -0.33
25 AT1G45230 Protein of unknown function (DUF3223) -0.75 0.3 -0.3
26 AT3G29375 XH domain-containing protein -0.75 0.3 -0.32
27 AT2G22480 phosphofructokinase 5 phosphofructokinase 5 0.75 0.33 -0.32
28 AT4G28300 Protein of unknown function (DUF1421) 0.75 0.31 -0.3
29 AT2G20900 diacylglycerol kinase 5 ATDGK5, diacylglycerol kinase 5 0.75 0.33 -0.3
30 AT5G03380 Heavy metal transport/detoxification superfamily protein 0.75 0.32 -0.32
31 AT1G07240 UDP-glucosyl transferase 71C5 UDP-glucosyl transferase 71C5 0.75 0.32 -0.31
32 AT3G54960 PDI-like 1-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 1, PDI-like
1-3, PROTEIN DISULFIDE ISOMERASE
1, PDI-like 1-3		 0.74 0.32 -0.32
33 AT1G31130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in
29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi -
0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.74 0.3 -0.33
34 AT2G37550 ARF-GAP domain 7 ARF-GAP domain 7, yeast pde1
suppressor 1		 0.74 0.33 -0.3
35 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.74 0.3 -0.32
36 AT5G40660 ATP12 protein-related 0.74 0.3 -0.3
37 AT1G35910 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
D		 0.74 0.31 -0.34
38 AT5G03450 Transducin/WD40 repeat-like superfamily protein -0.74 0.32 -0.33
39 AT5G20650 copper transporter 5 copper transporter 5 0.74 0.32 -0.31
40 AT4G21780 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.74 0.29 -0.32
41 AT5G46780 VQ motif-containing protein 0.73 0.31 -0.31
42 AT2G24540 Galactose oxidase/kelch repeat superfamily protein ATTENUATED FAR-RED RESPONSE -0.73 0.34 -0.32
43 AT5G11970 Protein of unknown function (DUF3511) 0.73 0.3 -0.33
44 AT3G16690 Nodulin MtN3 family protein AtSWEET16, SWEET16 0.73 0.32 -0.3
45 AT1G17190 glutathione S-transferase tau 26 glutathione S-transferase tau 26,
glutathione S-transferase tau 26		 0.72 0.31 -0.3
46 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.72 0.31 -0.32
47 AT1G71190 senescence associated gene 18 senescence associated gene 18 0.72 0.32 -0.3
48 AT3G54350 Forkhead-associated (FHA) domain-containing protein embryo defective 1967 -0.72 0.32 -0.32
49 AT1G67690 Zincin-like metalloproteases family protein -0.72 0.33 -0.31
50 AT3G24550 proline extensin-like receptor kinase 1 proline-rich extensin-like
receptor kinase 1, proline-rich
extensin-like receptor kinase 1		 0.71 0.3 -0.3
51 AT4G33905 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.71 0.32 -0.31
52 AT5G55470 Na+/H+ (sodium hydrogen) exchanger 3 ARABIDOPSIS THALIANA NA+/H+
(SODIUM HYDROGEN) EXCHANGER 3,
Na+/H+ (sodium hydrogen) exchanger
3		 -0.71 0.34 -0.31
53 AT5G46230 Protein of unknown function, DUF538 0.71 0.33 -0.31
54 AT5G47040 lon protease 2 lon protease 2 -0.71 0.33 -0.32
55 AT5G15780 Pollen Ole e 1 allergen and extensin family protein -0.71 0.32 -0.32
56 AT4G17360 Formyl transferase -0.71 0.32 -0.32
57 AT4G13340 Leucine-rich repeat (LRR) family protein leucine-rich repeat/extensin 3 0.71 0.31 -0.29
58 AT4G38420 SKU5 similar 9 SKU5 similar 9 0.7 0.32 -0.33
59 AT1G43640 tubby like protein 5 tubby like protein 5, tubby like
protein 5		 0.7 0.34 -0.32
60 AT2G40060 Clathrin light chain protein clathrin light chain 2 0.7 0.3 -0.31
61 AT5G03630 Pyridine nucleotide-disulphide oxidoreductase family
protein		 ATMDAR2 0.7 0.31 -0.32
62 AT4G36030 armadillo repeat only 3 armadillo repeat only 3 0.7 0.33 -0.3
63 AT5G45550 Mob1/phocein family protein MOB1-like 0.7 0.32 -0.34
64 AT4G16740 terpene synthase 03 terpene synthase 03, terpene
synthase 03		 0.7 0.33 -0.32
65 AT5G55340 MBOAT (membrane bound O-acyl transferase) family protein -0.7 0.32 -0.33
66 AT5G03070 importin alpha isoform 9 importin alpha isoform 9 -0.7 0.3 -0.32
67 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein 0.7 0.33 -0.32
68 AT5G07500 Zinc finger C-x8-C-x5-C-x3-H type family protein PEI1 -0.69 0.31 -0.32
69 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein 0.69 0.3 -0.31
70 AT3G17100 sequence-specific DNA binding transcription factors 0.69 0.3 -0.32
71 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.33 -0.32
72 AT5G13610 Protein of unknown function (DUF155) 0.69 0.31 -0.29
73 AT4G39660 alanine:glyoxylate aminotransferase 2 alanine:glyoxylate
aminotransferase 2		 0.69 0.32 -0.32
74 AT5G50210 quinolinate synthase ONSET OF LEAF DEATH 5, quinolinate
synthase, SULFUR E 3		 0.69 0.31 -0.28
75 AT2G35800 mitochondrial substrate carrier family protein S-adenosyl methionine
transporter-like		 -0.69 0.3 -0.32
76 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.31 -0.3
77 AT1G72530 plastid developmental protein DAG, putative 0.69 0.3 -0.31
78 AT5G37260 Homeodomain-like superfamily protein CIRCADIAN 1, REVEILLE 2 -0.69 0.3 -0.32
79 AT1G79880 RNA recognition motif (RRM)-containing protein -0.68 0.31 -0.31
80 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.68 0.31 -0.32
81 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 -0.68 0.31 -0.33
82 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 -0.68 0.32 -0.32
83 AT2G45700 sterile alpha motif (SAM) domain-containing protein -0.67 0.31 -0.32
84 AT2G33820 Mitochondrial substrate carrier family protein ATMBAC1, MBAC1 -0.66 0.32 -0.31
85 AT2G03580 F-box family protein-related -0.66 0.32 -0.3
86 AT3G16060 ATP binding microtubule motor family protein -0.66 0.33 -0.32
87 AT3G56550 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.32 -0.33
88 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 -0.66 0.3 -0.29
89 AT1G60160 Potassium transporter family protein -0.66 0.29 -0.32
90 AT1G51170 Protein kinase superfamily protein -0.66 0.34 -0.32
91 AT1G30610 pentatricopeptide (PPR) repeat-containing protein EMBRYO DEFECTIVE 2279, EMBRYO
DEFECTIVE 88		 -0.66 0.32 -0.29
92 AT2G25710 holocarboxylase synthase 1 holocarboxylase synthase 1 -0.66 0.34 -0.31
93 AT5G44660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits
to 462 proteins in 141 species: Archae - 2; Bacteria - 370;
Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other
Eukaryotes - 239 (source: NCBI BLink).		 -0.65 0.33 -0.33
94 AT1G06740 transposable element gene -0.65 0.29 -0.32
95 AT5G27530 Pectin lyase-like superfamily protein -0.65 0.31 -0.35
96 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.65 0.32 -0.33
97 AT5G59430 telomeric repeat binding protein 1 TELOMERE REPEAT BINDING PROTEIN 1,
telomeric repeat binding protein 1		 -0.64 0.3 -0.31
98 AT3G57780 BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast
hits to 2460 proteins in 357 species: Archae - 16; Bacteria
- 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses -
72; Other Eukaryotes - 1360 (source: NCBI BLink).		 -0.64 0.32 -0.33
99 AT5G02480 HSP20-like chaperones superfamily protein -0.64 0.28 -0.3
100 AT1G72290 Kunitz family trypsin and protease inhibitor protein -0.64 0.31 -0.31
101 AT4G27510 unknown protein; Has 25 Blast hits to 23 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.31 -0.31
102 AT1G62690 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.33 -0.3
103 AT5G40070 MADS-box family protein -0.64 0.3 -0.31
104 AT1G60970 SNARE-like superfamily protein -0.64 0.31 -0.33
105 AT2G38590 F-box and associated interaction domains-containing protein -0.64 0.32 -0.32
106 AT5G50340 ATP-dependent peptidases;nucleotide binding;serine-type
endopeptidases;DNA helicases;ATP binding;damaged DNA
binding;nucleoside-triphosphatases		 -0.64 0.33 -0.34
107 AT1G23310 glutamate:glyoxylate aminotransferase ALANINE-2-OXOGLUTARATE
AMINOTRANSFERASE 1,
GLUTAMATE:GLYOXYLATE
AMINOTRANSFERASE 1,
glutamate:glyoxylate
aminotransferase		 -0.64 0.3 -0.32
108 ATCG00650 ribosomal protein S18 ribosomal protein S18 -0.63 0.33 -0.32
109 AT1G44760 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.63 0.31 -0.31
110 AT5G62110 Homeodomain-like superfamily protein -0.63 0.31 -0.3
111 AT5G02430 Transducin/WD40 repeat-like superfamily protein -0.63 0.3 -0.31
112 AT1G19060 Protein of unknown function (DUF626) -0.63 0.32 -0.33
113 AT2G31910 cation/H+ exchanger 21 cation/H+ exchanger 21, cation/H+
exchanger 21		 -0.63 0.3 -0.31
114 AT1G50180 NB-ARC domain-containing disease resistance protein -0.63 0.33 -0.34
115 AT2G45620 Nucleotidyltransferase family protein -0.63 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0263 UMP - UMP pyrimidine salvage pathway,
dolichyl-diphosphooligosaccharide biosynthesis,
lipid IVA biosynthesis,
uridine-5'-phosphate biosynthesis,
pyrimidine ribonucleotides interconversion 		-0.83 0.44 -0.43 C0263