AT3G55960 : -
Query Information
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AGICode AT3G55960
Description Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G55960 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 1 0.3 -0.3
2 AT4G20780 calmodulin like 42 calmodulin like 42 0.71 0.33 -0.31
3 AT1G14730 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.71 0.32 -0.32
4 AT5G37500 gated outwardly-rectifying K+ channel gated outwardly-rectifying K+
channel		 -0.7 0.3 -0.32
5 AT5G47020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.7 0.3 -0.31
6 AT4G14680 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS3 0.7 0.32 -0.31
7 AT1G75960 AMP-dependent synthetase and ligase family protein 0.7 0.34 -0.3
8 AT3G09020 alpha 1,4-glycosyltransferase family protein 0.69 0.3 -0.33
9 AT1G20450 Dehydrin family protein EARLY RESPONSIVE TO DEHYDRATION
10, LOW TEMPERATURE INDUCED 29,
LOW TEMPERATURE INDUCED 45		 -0.69 0.32 -0.33
10 AT2G40930 ubiquitin-specific protease 5 ATUBP5, PIGMENT DEFECTIVE EMBRYO
323, ubiquitin-specific protease 5		 -0.69 0.31 -0.32
11 AT2G21300 ATP binding microtubule motor family protein -0.68 0.31 -0.32
12 AT1G58080 ATP phosphoribosyl transferase 1 ATP phosphoribosyl transferase 1,
ATP phosphoribosyl transferase 1,
HISN1A		 0.68 0.3 -0.32
13 AT2G43600 Chitinase family protein 0.67 0.31 -0.32
14 AT3G50270 HXXXD-type acyl-transferase family protein 0.67 0.34 -0.29
15 AT1G19580 gamma carbonic anhydrase 1 gamma carbonic anhydrase 1 0.67 0.33 -0.32
16 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.67 0.31 -0.3
17 AT5G05610 alfin-like 1 alfin-like 1 0.67 0.32 -0.29
18 AT2G29210 splicing factor PWI domain-containing protein -0.67 0.31 -0.34
19 AT2G46330 arabinogalactan protein 16 arabinogalactan protein 16,
ATAGP16		 0.66 0.33 -0.32
20 AT1G72740 Homeodomain-like/winged-helix DNA-binding family protein 0.66 0.31 -0.3
21 AT1G06160 octadecanoid-responsive Arabidopsis AP2/ERF 59 octadecanoid-responsive
Arabidopsis AP2/ERF 59		 0.66 0.31 -0.32
22 AT2G29190 pumilio 2 pumilio 2, pumilio 2 -0.66 0.29 -0.32
23 AT4G36030 armadillo repeat only 3 armadillo repeat only 3 0.66 0.32 -0.32
24 AT2G29090 cytochrome P450, family 707, subfamily A, polypeptide 2 cytochrome P450, family 707,
subfamily A, polypeptide 2		 -0.65 0.31 -0.31
25 AT4G15920 Nodulin MtN3 family protein AtSWEET17, SWEET17 0.65 0.3 -0.3
26 AT4G35190 Putative lysine decarboxylase family protein LONELY GUY 5 -0.65 0.32 -0.29
27 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 -0.65 0.33 -0.33
28 AT5G61590 Integrase-type DNA-binding superfamily protein 0.64 0.32 -0.32
29 AT5G23670 long chain base2 long chain base2 0.64 0.31 -0.3
30 AT5G53880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.63 0.31 -0.32
31 AT1G49720 abscisic acid responsive element-binding factor 1 abscisic acid responsive
element-binding factor 1		 -0.63 0.32 -0.32
32 AT1G66360 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.63 0.3 -0.33
33 AT1G21670 LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller
(InterPro:IPR011659), Six-bladed beta-propeller, TolB-like
(InterPro:IPR011042); BEST Arabidopsis thaliana protein
match is: DPP6 N-terminal domain-like protein
(TAIR:AT1G21680.1); Has 8461 Blast hits to 5060 proteins in
1257 species: Archae - 79; Bacteria - 5567; Metazoa - 37;
Fungi - 70; Plants - 117; Viruses - 0; Other Eukaryotes -
2591 (source: NCBI BLink).		 -0.63 0.31 -0.35
34 AT3G53040 late embryogenesis abundant protein, putative / LEA
protein, putative		 -0.63 0.3 -0.3
35 AT3G26200 cytochrome P450, family 71, subfamily B, polypeptide 22 cytochrome P450, family 71,
subfamily B, polypeptide 22		 0.63 0.33 -0.32
36 AT2G15970 cold regulated 413 plasma membrane 1 ARABIDOPSIS THALIANA
COLD-REGULATED413 PLASMA MEMBRANE
1, CYCLOPHILLIN 19, cold regulated
413 plasma membrane 1, FL3-5A3,
WCOR413, WCOR413-LIKE		 -0.63 0.34 -0.34
37 AT5G03380 Heavy metal transport/detoxification superfamily protein 0.63 0.31 -0.3
38 AT4G24960 HVA22 homologue D ARABIDOPSIS THALIANA HVA22
HOMOLOGUE D, HVA22 homologue D		 -0.62 0.3 -0.33
39 AT1G21790 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.62 0.29 -0.29
40 AT5G14120 Major facilitator superfamily protein 0.62 0.33 -0.31
41 AT4G30830 Protein of unknown function, DUF593 -0.62 0.31 -0.31
42 AT5G57110 autoinhibited Ca2+ -ATPase, isoform 8 autoinhibited Ca2+ -ATPase,
isoform 8, AUTOINHIBITED CA2+
-ATPASE, ISOFORM 8		 -0.62 0.31 -0.31
43 AT2G23120 Late embryogenesis abundant protein, group 6 -0.62 0.31 -0.33
44 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.62 0.31 -0.33
45 AT2G17530 Protein kinase superfamily protein 0.61 0.32 -0.33
46 AT4G35410 Clathrin adaptor complex small chain family protein 0.61 0.31 -0.29
47 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.61 0.31 -0.32
48 AT4G21780 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.34 -0.33
49 AT1G32860 Glycosyl hydrolase superfamily protein -0.61 0.31 -0.31
50 AT1G16850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to salt stress; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, leaf whorl,
male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six
leaves visible, LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast
hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.31
51 AT5G46460 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.31 -0.32
52 AT5G07920 diacylglycerol kinase1 DIACYLGLYCEROL KINASE 1,
diacylglycerol kinase1		 -0.61 0.33 -0.33
53 AT4G11300 Protein of unknown function (DUF793) 0.6 0.32 -0.3
54 AT1G16570 UDP-Glycosyltransferase superfamily protein 0.6 0.32 -0.34
55 AT1G49450 Transducin/WD40 repeat-like superfamily protein -0.6 0.32 -0.31
56 AT2G30800 helicase in vascular tissue and tapetum ATVT-1, helicase in vascular
tissue and tapetum		 -0.6 0.32 -0.32
57 AT5G40980 Protein of unknown function (DUF 3339) 0.6 0.29 -0.33
58 AT5G53530 vacuolar protein sorting 26A vacuolar protein sorting 26A 0.6 0.31 -0.32
59 AT1G65590 beta-hexosaminidase 3 ATHEX1, beta-hexosaminidase 3 0.59 0.32 -0.31
60 AT1G20440 cold-regulated 47 AtCOR47, cold-regulated 47, RD17 -0.59 0.32 -0.29
61 AT2G41210 phosphatidylinositol- 4-phosphate 5-kinase 5 phosphatidylinositol- 4-phosphate
5-kinase 5		 -0.59 0.31 -0.28
62 AT3G11290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits
to 435 proteins in 28 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.59 0.3 -0.31
63 AT3G62700 multidrug resistance-associated protein 10 ATP-binding cassette C14,
multidrug resistance-associated
protein 10, multidrug
resistance-associated protein 10		 -0.59 0.32 -0.31
64 AT4G40010 SNF1-related protein kinase 2.7 SUCROSE NONFERMENTING 1-RELATED
PROTEIN KINASE 2-7, SNF1-related
protein kinase 2.7, SRK2F		 -0.59 0.35 -0.32
65 AT2G41290 strictosidine synthase-like 2 strictosidine synthase-like 2 0.59 0.34 -0.32
66 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 -0.59 0.3 -0.31
67 AT1G22500 RING/U-box superfamily protein Arabidopsis thaliana Arabidopsis
toxicos en levadura 15,
Arabidopsis toxicos en levadura 15		 0.59 0.32 -0.29
68 AT1G55760 BTB/POZ domain-containing protein -0.59 0.3 -0.3
69 AT3G26560 ATP-dependent RNA helicase, putative -0.58 0.31 -0.3
70 AT2G27360 GDSL-like Lipase/Acylhydrolase superfamily protein 0.58 0.33 -0.34
71 AT5G55240 ARABIDOPSIS THALIANA PEROXYGENASE 2 ARABIDOPSIS THALIANA PEROXYGENASE
2		 -0.58 0.31 -0.33
72 AT2G13270 transposable element gene -0.58 0.3 -0.31
73 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.58 0.32 -0.34
74 AT2G40650 PRP38 family protein -0.58 0.34 -0.32
75 AT4G24200 Transcription elongation factor (TFIIS) family protein -0.58 0.33 -0.31
76 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATRX, CHR20 -0.58 0.31 -0.3
77 AT3G06300 P4H isoform 2 P4H isoform 2, prolyl
4-hydroxylase 2		 0.58 0.29 -0.31
78 AT4G00416 methyl-CPG-binding domain 3 methyl-CPG-binding domain 3 0.57 0.32 -0.34
79 AT1G44780 CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ
(InterPro:IPR019098); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G08310.1); Has 18105
Blast hits to 11200 proteins in 808 species: Archae - 37;
Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants -
674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI
BLink).		 -0.57 0.32 -0.32
80 AT4G23730 Galactose mutarotase-like superfamily protein 0.57 0.31 -0.32
81 AT1G62180 5'adenylylphosphosulfate reductase 2 5'adenylylphosphosulfate reductase
2, ADENOSINE-5'-PHOSPHOSULFATE
REDUCTASE, ATAPR2, PRH,
3'-PHOSPHOADENOSINE-5'-PHOSPHOSULF
ATE (PAPS) REDUCTASE HOMOLOG 43		 0.57 0.3 -0.32
82 AT4G16650 O-fucosyltransferase family protein -0.57 0.31 -0.31
83 AT2G09910 transposable element gene -0.57 0.33 -0.31
84 AT1G53390 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette G24 0.57 0.32 -0.3
85 AT1G78270 UDP-glucosyl transferase 85A4 UDP-glucosyl transferase 85A4,
UDP-glucosyl transferase 85A4		 0.57 0.31 -0.32
86 AT3G45600 tetraspanin3 tetraspanin3 -0.57 0.32 -0.31
87 AT5G26250 Major facilitator superfamily protein 0.57 0.32 -0.32
88 AT3G52360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35850.1); Has 34 Blast
hits to 34 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.3 -0.33
89 AT1G54510 NIMA-related serine/threonine kinase 1 NIMA-related serine/threonine
kinase 1, NIMA-related
serine/threonine kinase 1		 -0.56 0.31 -0.31
90 AT2G41900 CCCH-type zinc finger protein with ARM repeat domain OXIDATIVE STRESS 2 -0.56 0.32 -0.32
91 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.33 -0.29
92 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.56 0.32 -0.31
93 AT4G16442 Uncharacterised protein family (UPF0497) -0.56 0.31 -0.31
94 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 -0.56 0.31 -0.31
95 AT4G33330 plant glycogenin-like starch initiation protein 3 glucuronic acid substitution of
xylan 2, plant glycogenin-like
starch initiation protein 3		 -0.56 0.3 -0.31
96 AT1G18350 MAP kinase kinase 7 MAP kinase kinase 7, BUSHY AND
DWARF 1, MAP kinase kinase 7, MAP
KINASE KINASE7		 0.56 0.31 -0.32
97 AT3G57330 autoinhibited Ca2+-ATPase 11 autoinhibited Ca2+-ATPase 11 0.56 0.31 -0.32
98 AT3G24660 transmembrane kinase-like 1 transmembrane kinase-like 1 -0.55 0.34 -0.31
99 AT5G60220 tetraspanin4 tetraspanin4 -0.55 0.34 -0.32
100 AT1G10570 Cysteine proteinases superfamily protein OVERLY TOLERANT TO SALT 2, UB-LIKE
PROTEASE 1C		 -0.55 0.31 -0.32
101 AT2G34650 Protein kinase superfamily protein ABRUPTUS, PINOID -0.55 0.31 -0.34
102 AT2G15010 Plant thionin -0.55 0.31 -0.31
103 AT1G13910 Leucine-rich repeat (LRR) family protein -0.55 0.29 -0.3
104 AT5G46190 RNA-binding KH domain-containing protein -0.55 0.33 -0.31
105 AT2G37840 Protein kinase superfamily protein -0.55 0.28 -0.31
106 AT3G09370 myb domain protein 3r-3 myb domain protein 3R3, myb domain
protein 3r-3		 -0.55 0.33 -0.32
107 AT1G22310 methyl-CPG-binding domain 8 ATMBD8, methyl-CPG-binding domain
8		 -0.55 0.31 -0.31
108 AT4G34240 aldehyde dehydrogenase 3I1 aldehyde dehydrogenase 3, aldehyde
dehydrogenase 3I1		 -0.55 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
109 C0207 Phosphatidylglycerol-34:5 - - - 0.74 0.45 -0.47
110 C0188 Nicotine (-)-Nicotine Nicotine - -0.72 0.46 -0.45 C0188