AT3G55660 : ATROPGEF6
Query Information
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AGICode AT3G55660
Description ROP (rho of plants) guanine nucleotide exchange factor 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G55660 ROP (rho of plants) guanine nucleotide exchange factor 6 ATROPGEF6, ROP (rho of plants)
guanine nucleotide exchange factor
6		 1 0.31 -0.32
2 AT1G44110 Cyclin A1;1 Cyclin A1;1 0.82 0.32 -0.31
3 AT2G25060 early nodulin-like protein 14 AtENODL14, early nodulin-like
protein 14		 0.81 0.33 -0.31
4 AT3G15550 unknown protein; Has 25732 Blast hits to 16979 proteins in
961 species: Archae - 144; Bacteria - 1801; Metazoa -
12681; Fungi - 1868; Plants - 912; Viruses - 94; Other
Eukaryotes - 8232 (source: NCBI BLink).		 0.81 0.34 -0.32
5 AT3G52110 unknown protein; Has 191 Blast hits to 174 proteins in 54
species: Archae - 0; Bacteria - 7; Metazoa - 45; Fungi - 7;
Plants - 40; Viruses - 0; Other Eukaryotes - 92 (source:
NCBI BLink).		 0.8 0.32 -0.31
6 AT1G20930 cyclin-dependent kinase B2;2 cyclin-dependent kinase B2;2 0.8 0.31 -0.31
7 AT5G48460 Actin binding Calponin homology (CH) domain-containing
protein		 0.79 0.31 -0.32
8 AT2G25880 ataurora2 ataurora2, ataurora2 0.79 0.31 -0.33
9 AT1G02730 cellulose synthase-like D5 cellulose synthase-like D5,
CELLULOSE SYNTHASE LIKE D5,
cellulose synthase-like D5, SALT
OVERLY SENSITIVE 6		 0.79 0.31 -0.3
10 AT1G23790 Plant protein of unknown function (DUF936) 0.78 0.31 -0.32
11 AT1G34370 C2H2 and C2HC zinc fingers superfamily protein sensitive to proton rhizotoxicity
1		 -0.78 0.3 -0.32
12 AT4G23800 HMG (high mobility group) box protein 3xHigh Mobility Group-box2 0.78 0.31 -0.32
13 AT2G18090 PHD finger family protein / SWIB complex BAF60b
domain-containing protein / GYF domain-containing protein		 -0.77 0.33 -0.32
14 AT4G34160 CYCLIN D3;1 CYCD3, CYCLIN D3;1 0.77 0.32 -0.31
15 AT5G62550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; Has 14949 Blast hits to 9947
proteins in 971 species: Archae - 43; Bacteria - 3248;
Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55;
Other Eukaryotes - 5075 (source: NCBI BLink).		 0.77 0.3 -0.29
16 AT2G16270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G16630.1); Has 1844
Blast hits to 1256 proteins in 271 species: Archae - 6;
Bacteria - 283; Metazoa - 434; Fungi - 153; Plants - 91;
Viruses - 52; Other Eukaryotes - 825 (source: NCBI BLink).		 0.76 0.28 -0.31
17 AT3G02120 hydroxyproline-rich glycoprotein family protein 0.76 0.31 -0.3
18 AT2G46210 Fatty acid/sphingolipid desaturase AtSLD2, sphingoid LCB desaturase 2 0.76 0.34 -0.34
19 AT4G32830 ataurora1 ataurora1, ataurora1 0.76 0.31 -0.31
20 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.76 0.3 -0.33
21 AT5G16250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.76 0.31 -0.32
22 AT3G51280 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.32 -0.33
23 AT3G23170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits
to 74 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.32 -0.31
24 AT3G25980 DNA-binding HORMA family protein MITOTIC ARREST-DEFICIENT 2 0.75 0.29 -0.31
25 AT3G19590 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.1		 0.75 0.33 -0.33
26 AT3G26090 G-protein coupled receptors;GTPase activators REGULATOR OF G-PROTEIN SIGNALING
1, REGULATOR OF G-PROTEIN
SIGNALING 1		 -0.75 0.32 -0.3
27 AT2G37420 ATP binding microtubule motor family protein 0.75 0.33 -0.32
28 AT5G50740 Heavy metal transport/detoxification superfamily protein 0.75 0.32 -0.3
29 AT4G04620 Ubiquitin-like superfamily protein autophagy 8b -0.74 0.33 -0.33
30 AT1G18370 ATP binding microtubule motor family protein ARABIDOPSIS NPK1-ACTIVATING
KINESIN 1, HINKEL, NPK1-ACTIVATING
KINESIN 1		 0.74 0.33 -0.3
31 AT4G11080 HMG (high mobility group) box protein 3xHigh Mobility Group-box1 0.74 0.32 -0.32
32 AT3G04630 WVD2-like 1 WVD2-like 1 0.74 0.31 -0.32
33 AT5G13330 related to AP2 6l related to AP2 6l -0.74 0.31 -0.31
34 AT3G14190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12360.1); Has 18 Blast hits
to 18 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.3 -0.32
35 AT1G08560 syntaxin of plants 111 ATSYP111, KNOLLE, syntaxin of
plants 111		 0.74 0.31 -0.31
36 AT3G53380 Concanavalin A-like lectin protein kinase family protein 0.74 0.31 -0.3
37 AT3G06030 NPK1-related protein kinase 3 NPK1-related protein kinase 3,
AtANP3, MAPKKK12, NPK1-related
protein kinase 3		 0.73 0.32 -0.31
38 AT1G61450 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G61415.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.73 0.34 -0.31
39 AT2G33710 Integrase-type DNA-binding superfamily protein -0.73 0.32 -0.3
40 AT1G50490 ubiquitin-conjugating enzyme 20 ubiquitin-conjugating enzyme 20 0.73 0.32 -0.32
41 AT1G09450 Protein kinase superfamily protein AtHaspin, Haspin-related gene 0.73 0.31 -0.31
42 AT1G08315 ARM repeat superfamily protein -0.73 0.33 -0.31
43 AT4G01730 DHHC-type zinc finger family protein 0.73 0.33 -0.32
44 AT1G72670 IQ-domain 8 IQ-domain 8 0.73 0.3 -0.32
45 AT5G25090 early nodulin-like protein 13 AtENODL13, early nodulin-like
protein 13		 0.72 0.3 -0.32
46 AT3G08720 serine/threonine protein kinase 2 Arabidopsis thaliana protein
kinase 19, ARABIDOPSIS THALIANA
PROTEIN KINASE 2, ARABIDOPSIS
THALIANA SERINE/THREONINE PROTEIN
KINASE 2, serine/threonine protein
kinase 2		 -0.72 0.29 -0.32
47 AT2G37080 ROP interactive partner 3 ROP interactive partner 3 0.72 0.31 -0.32
48 AT5G11510 myb domain protein 3r-4 myb domain protein 3R4, myb domain
protein 3r-4		 0.72 0.31 -0.34
49 AT5G15510 TPX2 (targeting protein for Xklp2) protein family 0.72 0.31 -0.3
50 AT3G23605 Ubiquitin-like superfamily protein -0.72 0.3 -0.33
51 AT5G43450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.72 0.32 -0.32
52 AT2G47500 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.72 0.33 -0.34
53 AT3G46930 Protein kinase superfamily protein -0.72 0.32 -0.31
54 AT1G34355 forkhead-associated (FHA) domain-containing protein PARALLEL SPINDLE 1, PARALLEL
SPINDLE 1		 0.72 0.31 -0.33
55 AT5G46740 ubiquitin-specific protease 21 ubiquitin-specific protease 21 0.72 0.32 -0.31
56 AT1G14370 protein kinase 2A protein kinase 2A, kinase 1,
PBS1-like 2		 -0.71 0.3 -0.31
57 AT5G04620 biotin F biotin F, biotin 4, biotin F 0.71 0.34 -0.31
58 AT2G44190 Family of unknown function (DUF566) ENDOSPERM DEFECTIVE 1, EMBRYO
DEFECTIVE 3116, QWRF domain
containing 5		 0.71 0.33 -0.3
59 AT3G12870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits
to 70 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.32 -0.34
60 AT5G13840 FIZZY-related 3 FIZZY-related 3 0.71 0.32 -0.32
61 AT1G72250 Di-glucose binding protein with Kinesin motor domain 0.71 0.32 -0.32
62 AT2G46500 phosphoinositide 4-kinase gamma 4 phosphoinositide 4-kinase gamma 4,
phosphoinositide 4-kinase gamma 4,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
4		 -0.7 0.3 -0.31
63 AT5G63370 Protein kinase superfamily protein -0.7 0.3 -0.3
64 AT4G18375 RNA-binding KH domain-containing protein 0.7 0.3 -0.32
65 AT1G01730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 42 Blast hits to 42 proteins
in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi
- 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.7 0.3 -0.29
66 AT5G60930 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.32 -0.33
67 AT3G27330 zinc finger (C3HC4-type RING finger) family protein 0.7 0.32 -0.34
68 AT5G03700 D-mannose binding lectin protein with Apple-like
carbohydrate-binding domain		 -0.7 0.31 -0.33
69 AT4G24610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G65440.1); Has 820 Blast
hits to 264 proteins in 74 species: Archae - 0; Bacteria -
15; Metazoa - 77; Fungi - 83; Plants - 96; Viruses - 0;
Other Eukaryotes - 549 (source: NCBI BLink).		 0.7 0.3 -0.32
70 AT4G08300 nodulin MtN21 /EamA-like transporter family protein 0.7 0.32 -0.29
71 AT1G49630 presequence protease 2 presequence protease 2,
presequence protease 2		 0.7 0.32 -0.32
72 AT1G61140 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 embryo sac development arrest 16 -0.7 0.29 -0.29
73 AT1G32530 RING/U-box superfamily protein -0.7 0.32 -0.31
74 AT2G31750 UDP-glucosyl transferase 74D1 UDP-glucosyl transferase 74D1 -0.69 0.32 -0.34
75 AT3G16740 F-box and associated interaction domains-containing protein -0.69 0.29 -0.32
76 AT3G04070 NAC domain containing protein 47 NAC domain containing protein 47,
NAC domain containing protein 47		 -0.68 0.33 -0.32
77 AT1G32630 unknown protein; Has 18 Blast hits to 18 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2;
Plants - 12; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.68 0.32 -0.32
78 AT4G02330 Plant invertase/pectin methylesterase inhibitor superfamily AtPME41, ATPMEPCRB, pectin
methylesterase 41		 -0.67 0.3 -0.31
79 AT5G55530 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.67 0.3 -0.31
80 AT3G17710 F-box and associated interaction domains-containing protein -0.67 0.31 -0.32
81 AT5G18950 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.31 -0.32
82 AT1G35140 Phosphate-responsive 1 family protein EXORDIUM like 1, PHOSPHATE-INDUCED
1		 -0.67 0.31 -0.33
83 AT1G20310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G76070.1); Has 46 Blast
hits to 46 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.33 -0.3
84 AT1G18890 calcium-dependent protein kinase 1 calcium-dependent protein kinase
1, AtCPK10, calcium-dependent
protein kinase 1, CPK10		 -0.66 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
85 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.72 0.47 -0.49 C0016
86 C0159 MST_1505.6 - - - 0.7 0.41 -0.45
87 C0162 MST_1588.3 - - - 0.7 0.47 -0.46