AT3G55460 : SC35-like splicing factor 30
Query Information
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AGICode AT3G55460
Description SC35-like splicing factor 30
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G55460 SC35-like splicing factor 30 SC35-like splicing factor 30,
SC35-like splicing factor 30		 1 0.32 -0.31
2 AT4G34215 Domain of unknown function (DUF303) 0.77 0.31 -0.3
3 AT2G38905 Low temperature and salt responsive protein family -0.77 0.33 -0.3
4 AT2G21600 endoplasmatic reticulum retrieval protein 1B endoplasmatic reticulum retrieval
protein 1B, endoplasmatic
reticulum retrieval protein 1B		 0.76 0.31 -0.31
5 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 0.75 0.3 -0.32
6 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 0.74 0.32 -0.31
7 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 0.73 0.31 -0.32
8 AT5G18110 novel cap-binding protein novel cap-binding protein 0.72 0.32 -0.32
9 AT5G51700 protein binding;zinc ion binding ATRAR1, PPHB SUSCEPTIBLE 2,
Required for Mla12 resistance 1,
RPR2		 0.72 0.33 -0.32
10 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 -0.72 0.31 -0.37
11 AT3G58460 RHOMBOID-like protein 15 RHOMBOID-like protein 15,
RHOMBOID-like protein 15		 0.71 0.32 -0.31
12 AT5G65710 HAESA-like 2 HAESA-like 2 -0.71 0.3 -0.31
13 AT2G23310 Rer1 family protein ATRER1C1 0.71 0.33 -0.32
14 AT1G51160 SNARE-like superfamily protein 0.7 0.32 -0.3
15 AT4G22300 carboxylesterases SUPPRESSOR OF AVRBST-ELICITED
RESISTANCE 1		 0.7 0.31 -0.33
16 AT5G62490 HVA22 homologue B ARABIDOPSIS THALIANA HVA22
HOMOLOGUE B, HVA22 homologue B		 -0.69 0.32 -0.32
17 AT1G01830 ARM repeat superfamily protein -0.69 0.31 -0.31
18 AT5G27820 Ribosomal L18p/L5e family protein 0.69 0.31 -0.31
19 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 0.69 0.31 -0.3
20 AT1G62820 Calcium-binding EF-hand family protein 0.69 0.31 -0.32
21 AT5G55950 Nucleotide/sugar transporter family protein -0.69 0.31 -0.33
22 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 0.69 0.28 -0.32
23 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 -0.69 0.3 -0.33
24 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein 0.69 0.28 -0.31
25 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 0.69 0.33 -0.3
26 AT2G02800 protein kinase 2B protein kinase 2B, kinase 2 0.68 0.35 -0.32
27 AT3G07000 Cysteine/Histidine-rich C1 domain family protein 0.68 0.32 -0.3
28 AT5G15770 glucose-6-phosphate acetyltransferase 1 glucose-6-phosphate
acetyltransferase 1,
glucose-6-phosphate
acetyltransferase 1		 0.67 0.31 -0.34
29 AT2G02660 F-box associated ubiquitination effector family protein 0.67 0.3 -0.3
30 AT3G55350 PIF / Ping-Pong family of plant transposases 0.67 0.32 -0.31
31 AT4G27760 NAD(P)-binding Rossmann-fold superfamily protein FOREVER YOUNG, FEY3 0.67 0.32 -0.3
32 AT5G51870 AGAMOUS-like 71 AGAMOUS-like 71 -0.67 0.35 -0.3
33 AT3G04780 Protein of unknown function (DUF1000) 0.67 0.32 -0.32
34 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 -0.67 0.33 -0.31
35 AT4G20870 fatty acid hydroxylase 2 ARABIDOPSIS FATTY ACID HYDROXYLASE
2, fatty acid hydroxylase 2		 0.66 0.32 -0.32
36 AT1G19060 Protein of unknown function (DUF626) -0.66 0.28 -0.32
37 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 -0.66 0.32 -0.31
38 AT3G17520 Late embryogenesis abundant protein (LEA) family protein -0.66 0.3 -0.29
39 AT3G47980 Integral membrane HPP family protein 0.66 0.31 -0.33
40 AT3G05150 Major facilitator superfamily protein 0.66 0.31 -0.3
41 AT5G11280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.66 0.32 -0.33
42 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 -0.66 0.31 -0.3
43 AT1G09150 pseudouridine synthase and archaeosine transglycosylase
(PUA) domain-containing protein		 0.66 0.31 -0.31
44 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3		 0.66 0.3 -0.32
45 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 0.65 0.34 -0.31
46 AT1G08370 decapping 1 ATDCP1, decapping 1 0.65 0.32 -0.31
47 AT1G73720 transducin family protein / WD-40 repeat family protein SUPPRESSORS OF MEC-8 AND UNC-52 1 0.65 0.33 -0.31
48 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.65 0.33 -0.29
49 AT4G33905 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.65 0.32 -0.29
50 AT4G17010 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.32 -0.31
51 AT2G10050 transposable element gene -0.65 0.33 -0.32
52 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 0.65 0.31 -0.32
53 AT5G14940 Major facilitator superfamily protein -0.65 0.31 -0.32
54 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED -0.65 0.33 -0.3
55 AT1G26300 BSD domain-containing protein 0.65 0.31 -0.34
56 AT4G18410 transposable element gene -0.65 0.31 -0.3
57 AT1G27990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits
to 86 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.65 0.33 -0.34
58 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.65 0.32 -0.33
59 AT5G10980 Histone superfamily protein 0.64 0.3 -0.3
60 AT4G18593 dual specificity protein phosphatase-related 0.64 0.33 -0.3
61 AT4G09830 Uncharacterised conserved protein UCP009193 0.64 0.33 -0.31
62 AT1G31240 Bromodomain transcription factor 0.64 0.3 -0.3
63 AT3G08910 DNAJ heat shock family protein 0.64 0.31 -0.35
64 AT5G07050 nodulin MtN21 /EamA-like transporter family protein -0.64 0.3 -0.3
65 AT3G24790 Protein kinase superfamily protein -0.64 0.34 -0.31
66 AT5G59030 copper transporter 1 copper transporter 1 0.64 0.31 -0.31
67 AT1G48220 Protein kinase superfamily protein -0.64 0.33 -0.33
68 AT5G38470 Rad23 UV excision repair protein family RADIATION SENSITIVE23D 0.64 0.31 -0.32
69 AT4G14600 Target SNARE coiled-coil domain protein 0.63 0.32 -0.33
70 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 -0.63 0.32 -0.32
71 AT3G58630 sequence-specific DNA binding transcription factors 0.63 0.32 -0.33
72 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 -0.63 0.33 -0.31
73 AT3G12960 unknown protein; Has 44 Blast hits to 44 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.31
74 AT5G44710 CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,
mitochondrial (InterPro:IPR013219); Has 101 Blast hits to
101 proteins in 55 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 0.63 0.32 -0.31
75 AT5G02740 Ribosomal protein S24e family protein 0.63 0.3 -0.33
76 AT1G06760 winged-helix DNA-binding transcription factor family
protein		 0.63 0.32 -0.33
77 AT3G12530 PSF2 PSF2 0.62 0.31 -0.31
78 AT2G26600 Glycosyl hydrolase superfamily protein -0.62 0.34 -0.32
79 AT2G19660 Cysteine/Histidine-rich C1 domain family protein 0.62 0.32 -0.31
80 AT4G08190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.3 -0.28
81 AT5G22540 Plant protein of unknown function (DUF247) -0.62 0.34 -0.31
82 AT4G15900 pleiotropic regulatory locus 1 pleiotropic regulatory locus 1 0.62 0.33 -0.32
83 AT5G09770 Ribosomal protein L17 family protein 0.62 0.31 -0.31
84 AT4G17460 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein HAT1 0.62 0.31 -0.33
85 AT3G60790 F-box family protein -0.61 0.3 -0.29
86 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.61 0.3 -0.3
87 AT2G37880 Protein of unknown function, DUF617 -0.61 0.3 -0.31
88 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 -0.61 0.31 -0.32
89 AT1G63560 Receptor-like protein kinase-related family protein -0.6 0.33 -0.31
90 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.6 0.32 -0.31
91 AT1G23330 alpha/beta-Hydrolases superfamily protein -0.6 0.3 -0.33
92 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 -0.6 0.28 -0.32
93 AT2G39710 Eukaryotic aspartyl protease family protein -0.6 0.33 -0.3
94 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 -0.59 0.33 -0.31
95 AT5G45610 protein dimerizations SENSITIVE TO UV 2 -0.59 0.34 -0.33
96 AT5G39785 Protein of unknown function (DUF1666) -0.59 0.32 -0.31
97 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.31 -0.29
98 AT5G13380 Auxin-responsive GH3 family protein -0.59 0.32 -0.33
99 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 -0.59 0.3 -0.33
100 AT5G50140 Ankyrin repeat family protein -0.58 0.32 -0.31
101 AT4G11330 MAP kinase 5 MAP kinase 5, MAP kinase 5 -0.58 0.32 -0.32
102 AT3G62490 transposable element gene -0.58 0.3 -0.34
103 AT1G63430 Leucine-rich repeat protein kinase family protein -0.58 0.31 -0.32
104 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 -0.58 0.29 -0.33
105 AT4G03700 transposable element gene -0.57 0.31 -0.32
106 AT2G13500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits
to 126 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.32 -0.33
107 AT2G41900 CCCH-type zinc finger protein with ARM repeat domain OXIDATIVE STRESS 2 -0.57 0.31 -0.33
108 AT3G18770 Autophagy-related protein 13 -0.57 0.32 -0.31
109 AT2G45780 other RNA -0.57 0.33 -0.32
110 AT1G11610 cytochrome P450, family 71, subfamily A, polypeptide 18 cytochrome P450, family 71,
subfamily A, polypeptide 18		 -0.57 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
111 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.77 0.46 -0.45 C0228
112 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate 0.77 0.43 -0.43 C0136
113 C0132 Kaempferol-3-O-rutinoside - - - -0.67 0.48 -0.41
114 C0094 Galactosamine D-Galactosamine - - -0.64 0.47 -0.43