AT3G55440 : CYTOSOLIC TRIOSE PHOSPHATE ISOMERASE
Query Information
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AGICode AT3G55440
Description triosephosphate isomerase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G55440 triosephosphate isomerase CYTOSOLIC TRIOSE PHOSPHATE
ISOMERASE, CYTOSOLIC ISOFORM
TRIOSE PHOSPHATE ISOMERASE,
triosephosphate isomerase		 1 0.28 -0.3
2 AT3G08610 unknown protein; Has 40 Blast hits to 40 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.85 0.3 -0.31
3 AT4G34050 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 caffeoyl coenzyme A
O-methyltransferase 1		 0.84 0.33 -0.31
4 AT4G20150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, mitochondrial respiratory
chain complex I, respiratory chain complex I; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.82 0.3 -0.3
5 AT2G21870 copper ion binding;cobalt ion binding;zinc ion binding MALE GAMETOPHYTE DEFECTIVE 1 0.8 0.3 -0.32
6 AT4G01370 MAP kinase 4 MAP kinase 4, MAP kinase 4 0.79 0.32 -0.31
7 AT5G02380 metallothionein 2B metallothionein 2B 0.78 0.33 -0.31
8 AT1G15370 SNARE-like superfamily protein 0.78 0.32 -0.32
9 AT2G25190 PPPDE putative thiol peptidase family protein 0.77 0.33 -0.33
10 AT3G01390 vacuolar membrane ATPase 10 AVMA10, vacuolar membrane ATPase
10		 0.77 0.33 -0.32
11 AT3G61440 cysteine synthase C1 BETA-SUBSTITUTED ALA SYNTHASE 3;1,
CYSTEINE SYNTHASE C1, cysteine
synthase C1		 0.77 0.31 -0.33
12 AT3G46010 actin depolymerizing factor 1 actin depolymerizing factor 1,
atadf, ATADF1		 0.77 0.32 -0.32
13 AT3G52220 CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain
(InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins
in 346 species: Archae - 10; Bacteria - 184; Metazoa -
3955; Fungi - 1221; Plants - 712; Viruses - 24; Other
Eukaryotes - 2776 (source: NCBI BLink).		 0.76 0.32 -0.31
14 AT1G13440 glyceraldehyde-3-phosphate dehydrogenase C2 GLYCERALDEHYDE-3-PHOSPHATE
DEHYDROGENASE C-2,
glyceraldehyde-3-phosphate
dehydrogenase C2		 0.76 0.3 -0.32
15 AT4G31990 aspartate aminotransferase 5 ASPARTATE AMINOTRANSFERASE
DEFICIENT 3, aspartate
aminotransferase 5, ATAAT1		 0.76 0.32 -0.32
16 AT3G51600 lipid transfer protein 5 lipid transfer protein 5 0.76 0.3 -0.31
17 AT1G03350 BSD domain-containing protein 0.75 0.31 -0.3
18 AT3G07470 Protein of unknown function, DUF538 0.75 0.32 -0.32
19 AT2G47170 Ras-related small GTP-binding family protein ARF1A1C 0.75 0.3 -0.31
20 AT5G48170 F-box family protein SLEEPY2, SNEEZY -0.74 0.33 -0.3
21 AT2G43090 Aconitase/3-isopropylmalate dehydratase protein 0.74 0.32 -0.29
22 AT5G59880 actin depolymerizing factor 3 actin depolymerizing factor 3 0.74 0.31 -0.34
23 AT1G13870 calmodulin binding;purine nucleotide binding AtKTI12, DEFORMED ROOTS AND LEAVES
1		 0.74 0.3 -0.32
24 AT5G52840 NADH-ubiquinone oxidoreductase-related 0.74 0.3 -0.3
25 AT1G11650 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45B, RBP45B 0.74 0.3 -0.31
26 AT1G05010 ethylene-forming enzyme ethylene forming enzyme, EAT1,
ethylene-forming enzyme		 0.74 0.33 -0.33
27 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.74 0.33 -0.31
28 AT1G78040 Pollen Ole e 1 allergen and extensin family protein 0.74 0.32 -0.32
29 AT3G11800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.74 0.31 -0.29
30 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein 0.74 0.3 -0.32
31 AT1G75950 S phase kinase-associated protein 1 ARABIDOPSIS SKP1 HOMOLOGUE 1,
ATSKP1, S phase kinase-associated
protein 1, SKP1A, UFO INTERACTING
PROTEIN 1		 0.73 0.32 -0.32
32 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.73 0.32 -0.33
33 AT4G05000 Vacuolar protein sorting-associated protein VPS28 family
protein		 vacuolar protein
sorting-associated protein 28
homolog 1, VPS28-2		 0.73 0.31 -0.35
34 AT1G32500 non-intrinsic ABC protein 6 ATP-binding cassette I7,
non-intrinsic ABC protein 6,
non-intrinsic ABC protein 6		 0.73 0.31 -0.31
35 AT5G54760 Translation initiation factor SUI1 family protein 0.73 0.31 -0.32
36 AT5G52110 Protein of unknown function (DUF2930) COFACTOR ASSEMBLY OF COMPLEX C,
HIGH CHLOROPHYLL FLUORESCENCE 208		 0.73 0.31 -0.32
37 AT5G54280 myosin 2 myosin 2, ARABIDOPSIS THALIANA
MYOSIN 4, ARABIDOPSIS THALIANA
MYOSIN 1		 -0.72 0.31 -0.33
38 AT1G54540 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.72 0.32 -0.3
39 AT4G26100 casein kinase 1 casein kinase 1, CKL1 0.71 0.29 -0.32
40 AT2G33040 gamma subunit of Mt ATP synthase gamma subunit of Mt ATP synthase 0.71 0.32 -0.31
41 AT1G67710 response regulator 11 response regulator 11 -0.71 0.32 -0.32
42 AT1G80600 HOPW1-1-interacting 1 HOPW1-1-interacting 1 0.71 0.33 -0.32
43 AT1G66960 Terpenoid cyclases family protein LUP5 -0.71 0.31 -0.32
44 AT5G13450 delta subunit of Mt ATP synthase delta subunit of Mt ATP synthase 0.71 0.29 -0.31
45 AT5G50870 ubiquitin-conjugating enzyme 27 ubiquitin-conjugating enzyme 27 0.71 0.31 -0.29
46 AT2G19790 SNARE-like superfamily protein 0.71 0.31 -0.3
47 AT1G18600 RHOMBOID-like protein 12 ARABIDOPSIS RHOMBOID-LIKE PROTEIN
12, RHOMBOID-like protein 12		 0.71 0.33 -0.3
48 AT2G03200 Eukaryotic aspartyl protease family protein -0.71 0.32 -0.32
49 AT1G55190 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F2, PRA7 0.7 0.31 -0.32
50 AT3G58550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.7 0.31 -0.32
51 AT5G51590 AT hook motif DNA-binding family protein -0.7 0.32 -0.3
52 AT1G04690 potassium channel beta subunit 1 potassium channel beta subunit 1,
KV-BETA1		 0.7 0.31 -0.33
53 AT3G53340 nuclear factor Y, subunit B10 nuclear factor Y, subunit B10 0.7 0.32 -0.3
54 AT4G00895 ATPase, F1 complex, OSCP/delta subunit protein 0.7 0.31 -0.32
55 AT3G44540 fatty acid reductase 4 fatty acid reductase 4 -0.7 0.31 -0.34
56 AT1G76200 unknown protein; Has 96 Blast hits to 96 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 47;
Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source:
NCBI BLink).		 0.7 0.31 -0.3
57 AT1G50170 sirohydrochlorin ferrochelatase B sirohydrochlorin ferrochelatase B,
sirohydrochlorin ferrochelatase B		 0.7 0.32 -0.31
58 AT5G46860 Syntaxin/t-SNARE family protein ARABIDOPSIS THALIANA SYNTAXIN OF
PLANTS 22, ARABIDOPSIS THALIANA
VACUOLAR MORPHOLOGY 3, SHOOT
GRAVITROPISM 3, SYNTAXIN OF PLANTS
22, VACUOLAR MORPHOLOGY 3		 0.7 0.34 -0.33
59 AT5G49940 NIFU-like protein 2 CHLOROPLAST-LOCALIZED NIFU-LIKE
PROTEIN 2, NIFU-like protein 2		 0.69 0.31 -0.31
60 AT1G26160 Metal-dependent phosphohydrolase 0.69 0.32 -0.36
61 AT5G47570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.69 0.32 -0.31
62 AT1G21090 Cupredoxin superfamily protein -0.69 0.32 -0.32
63 AT5G66510 gamma carbonic anhydrase 3 gamma carbonic anhydrase 3 0.69 0.32 -0.35
64 AT2G36460 Aldolase superfamily protein 0.69 0.32 -0.33
65 AT2G36670 Eukaryotic aspartyl protease family protein -0.69 0.32 -0.33
66 AT5G04390 C2H2-type zinc finger family protein 0.69 0.31 -0.31
67 AT5G59910 Histone superfamily protein HTB4 0.69 0.3 -0.3
68 AT5G53530 vacuolar protein sorting 26A vacuolar protein sorting 26A 0.69 0.33 -0.31
69 AT4G17430 O-fucosyltransferase family protein 0.68 0.33 -0.33
70 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 0.68 0.31 -0.31
71 AT2G30870 glutathione S-transferase PHI 10 ARABIDOPSIS THALIANA GLUTATHIONE
S-TRANSFERASE PHI 10, ATGSTF4,
EARLY DEHYDRATION-INDUCED 13,
glutathione S-transferase PHI 10		 0.68 0.3 -0.32
72 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 0.68 0.32 -0.34
73 AT3G04120 glyceraldehyde-3-phosphate dehydrogenase C subunit 1 GLYCERALDEHYDE-3-PHOSPHATE
DEHYDROGENASE C SUBUNIT, GAPC-1,
glyceraldehyde-3-phosphate
dehydrogenase C subunit 1		 0.68 0.31 -0.3
74 AT5G59210 myosin heavy chain-related 0.68 0.31 -0.33
75 AT4G01410 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.68 0.29 -0.32
76 AT1G51540 Galactose oxidase/kelch repeat superfamily protein 0.67 0.31 -0.32
77 AT5G60860 RAB GTPase homolog A1F RAB GTPase homolog A1F, RAB GTPase
homolog A1F		 0.67 0.31 -0.32
78 AT4G20010 plastid transcriptionally active 9 ORGANELLAR SINGLE-STRANDED DNA
BINDING PROTEIN 2, plastid
transcriptionally active 9		 0.67 0.34 -0.29
79 AT3G62560 Ras-related small GTP-binding family protein 0.67 0.31 -0.34
80 AT3G57870 sumo conjugation enzyme 1 AHUS5, SUMO CONJUGATION ENZYME 1,
EMBRYO DEFECTIVE 1637, sumo
conjugation enzyme 1, SUMO
CONJUGATING ENZYME 1A		 0.67 0.32 -0.31
81 AT1G12840 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit
/ vacuolar proton pump C subunit (DET3)		 ARABIDOPSIS THALIANA VACUOLAR ATP
SYNTHASE SUBUNIT C, DE-ETIOLATED 3		 0.67 0.32 -0.32
82 AT1G30000 alpha-mannosidase 3 alpha-mannosidase 3 0.67 0.31 -0.31
83 AT2G20690 lumazine-binding family protein 0.67 0.3 -0.31
84 AT4G22310 Uncharacterised protein family (UPF0041) 0.67 0.3 -0.32
85 AT5G58970 uncoupling protein 2 uncoupling protein 2, uncoupling
protein 2		 0.67 0.31 -0.32
86 AT1G62410 MIF4G domain-containing protein 0.67 0.32 -0.31
87 AT4G22950 AGAMOUS-like 19 AGAMOUS-like 19, GL19 -0.66 0.33 -0.32
88 AT3G13175 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G16400.1); Has 29 Blast hits to 29 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.33 -0.33
89 AT5G05160 Leucine-rich repeat protein kinase family protein REDUCED IN LATERAL GROWTH1 -0.65 0.31 -0.31
90 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 -0.65 0.32 -0.32
91 AT4G12920 Eukaryotic aspartyl protease family protein UNDEAD -0.64 0.31 -0.32
92 AT1G52150 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-15, ATHB15, CORONA, INCURVATA
4		 -0.64 0.33 -0.36
93 AT5G09530 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1,
proline-rich protein 10		 -0.64 0.33 -0.32
94 AT5G49350 Glycine-rich protein family -0.64 0.33 -0.32
95 AT3G57010 Calcium-dependent phosphotriesterase superfamily protein -0.63 0.33 -0.32
96 AT3G24310 myb domain protein 305 MYB DOMAIN PROTEIN 71, myb domain
protein 305		 -0.63 0.32 -0.31
97 AT4G10640 IQ-domain 16 IQ-domain 16 -0.62 0.33 -0.31
98 AT5G51680 hydroxyproline-rich glycoprotein family protein -0.61 0.31 -0.32
99 AT2G35585 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits
to 67 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.31
100 AT2G22920 serine carboxypeptidase-like 12 serine carboxypeptidase-like 12 -0.61 0.31 -0.33
101 AT4G20390 Uncharacterised protein family (UPF0497) -0.61 0.31 -0.34
102 AT2G32300 uclacyanin 1 uclacyanin 1 -0.61 0.31 -0.31
103 AT4G25240 SKU5 similar 1 SKU5 similar 1 -0.61 0.31 -0.32
104 AT5G05960 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.61 0.32 -0.33
105 AT5G66080 Protein phosphatase 2C family protein -0.6 0.31 -0.3
106 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D		 -0.6 0.33 -0.3
107 AT3G22830 heat shock transcription factor A6B ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A6B, heat
shock transcription factor A6B		 -0.6 0.3 -0.31
108 AT5G37690 SGNH hydrolase-type esterase superfamily protein -0.6 0.33 -0.31
109 AT5G09480 hydroxyproline-rich glycoprotein family protein -0.6 0.34 -0.32
110 AT2G35170 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.6 0.3 -0.33
111 AT2G37360 ABC-2 type transporter family protein ATP-binding cassette G2 -0.6 0.3 -0.29
112 AT1G24430 HXXXD-type acyl-transferase family protein -0.6 0.33 -0.33
113 AT5G57100 Nucleotide/sugar transporter family protein -0.59 0.32 -0.31
114 AT3G22620 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.59 0.32 -0.32
115 AT2G22510 hydroxyproline-rich glycoprotein family protein -0.59 0.32 -0.3
116 AT5G46910 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 -0.59 0.31 -0.33
117 AT4G37730 basic leucine-zipper 7 basic leucine-zipper 7, basic
leucine-zipper 7		 -0.59 0.31 -0.31
118 AT5G45200 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.33 -0.29
119 AT1G18980 RmlC-like cupins superfamily protein -0.59 0.33 -0.32
120 AT1G11420 DOMAIN OF UNKNOWN FUNCTION 724 2 DOMAIN OF UNKNOWN FUNCTION 724 2,
DOMAIN OF UNKNOWN FUNCTION 724 2		 -0.58 0.31 -0.32
121 AT4G32860 unknown protein; Has 46 Blast hits to 46 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.34 -0.32
122 AT3G06390 Uncharacterised protein family (UPF0497) -0.58 0.34 -0.33
123 AT5G23430 Transducin/WD40 repeat-like superfamily protein -0.58 0.31 -0.32
124 AT4G19130 Replication factor-A protein 1-related -0.58 0.34 -0.31
125 AT4G23496 SPIRAL1-like5 SPIRAL1-like5 -0.58 0.32 -0.32
126 AT5G60210 ROP interactive partner 5 ROP interactive partner 5 -0.57 0.32 -0.32
127 AT5G57670 Protein kinase superfamily protein -0.57 0.31 -0.33
128 AT2G16005 MD-2-related lipid recognition domain-containing protein -0.57 0.32 -0.32
129 AT5G13580 ABC-2 type transporter family protein ATP-binding cassette G6 -0.57 0.32 -0.3
130 AT3G11430 glycerol-3-phosphate acyltransferase 5 GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 5,
glycerol-3-phosphate
acyltransferase 5		 -0.56 0.31 -0.32
131 AT2G28790 Pathogenesis-related thaumatin superfamily protein -0.56 0.31 -0.29
132 AT5G13900 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.56 0.31 -0.33
133 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.56 0.32 -0.31
134 AT5G09520 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 2 -0.56 0.33 -0.31
135 AT3G50410 OBF binding protein 1 OBF binding protein 1 -0.56 0.3 -0.31
136 AT1G62680 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.32 -0.32
137 AT2G48140 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 embryo sac development arrest 4 -0.56 0.32 -0.31
138 AT5G47530 Auxin-responsive family protein -0.55 0.31 -0.3
139 AT1G74460 GDSL-like Lipase/Acylhydrolase superfamily protein -0.55 0.3 -0.33
140 AT1G56320 BEST Arabidopsis thaliana protein match is: Glycine-rich
protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.55 0.31 -0.31
141 AT5G58860 cytochrome P450, family 86, subfamily A, polypeptide 1 CYP86, cytochrome P450, family 86,
subfamily A, polypeptide 1		 -0.55 0.31 -0.29
142 AT3G48010 cyclic nucleotide-gated channel 16 CYCLIC NUCLEOTIDE-GATED CHANNEL
16, cyclic nucleotide-gated
channel 16		 -0.55 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
143 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		-0.6 0.31 -0.3 C0008
144 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis -0.6 0.44 -0.43 C0240