AGICode | AT3G55380 |
Description | ubiquitin-conjugating enzyme 14 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G55380 | ubiquitin-conjugating enzyme 14 | ubiquitin-conjugating enzyme 14 | 1 | 0.32 | -0.3 | ||
2 | AT3G02080 | Ribosomal protein S19e family protein | 0.86 | 0.32 | -0.32 | |||
3 | AT3G11400 | eukaryotic translation initiation factor 3G1 | ATEIF3G1, eukaryotic translation initiation factor 3G1 |
0.85 | 0.29 | -0.33 | ||
4 | AT1G02780 | Ribosomal protein L19e family protein | embryo defective 2386 | 0.84 | 0.33 | -0.32 | ||
5 | AT2G27720 | 60S acidic ribosomal protein family | 0.84 | 0.32 | -0.31 | |||
6 | AT3G19760 | eukaryotic initiation factor 4A-III | eukaryotic initiation factor 4A-III |
0.84 | 0.31 | -0.28 | ||
7 | AT4G29830 | Transducin/WD40 repeat-like superfamily protein | vernalization independence 3 | 0.83 | 0.32 | -0.31 | ||
8 | AT3G05560 | Ribosomal L22e protein family | 0.83 | 0.31 | -0.32 | |||
9 | AT1G18080 | Transducin/WD40 repeat-like superfamily protein | ATARCA, RACK1A, RECEPTOR FOR ACTIVATED C KINASE 1 A |
0.83 | 0.29 | -0.3 | ||
10 | AT2G46230 | PIN domain-like family protein | 0.83 | 0.32 | -0.32 | |||
11 | AT5G23290 | prefoldin 5 | prefoldin 5 | 0.83 | 0.3 | -0.3 | ||
12 | AT3G43810 | calmodulin 7 | calmodulin 7 | 0.83 | 0.33 | -0.33 | ||
13 | AT3G09200 | Ribosomal protein L10 family protein | 0.83 | 0.31 | -0.31 | |||
14 | AT3G16940 | calmodulin binding;transcription regulators | -0.82 | 0.32 | -0.29 | |||
15 | AT3G49010 | breast basic conserved 1 | breast basic conserved 1, breast basic conserved 1, 40S RIBOSOMAL PROTEIN |
0.82 | 0.32 | -0.32 | ||
16 | AT5G15200 | Ribosomal protein S4 | 0.82 | 0.32 | -0.31 | |||
17 | AT3G51010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.82 | 0.33 | -0.31 | |||
18 | AT3G61140 | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain |
ARABIDOPSIS THALIANA FUSCA 6, SHAGGY-LIKE KINASE 31, CONSTITUTIVE PHOTOMORPHOGENIC 11, COP9 SIGNALOSOME SUBUNIT 1, EMBRYO DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE KINASE 31 |
0.82 | 0.34 | -0.32 | ||
19 | AT2G20140 | AAA-type ATPase family protein | regulatory particle AAA-ATPase 2b | 0.81 | 0.31 | -0.3 | ||
20 | AT3G49430 | SER/ARG-rich protein 34A | Serine/Arginine-Rich Protein Splicing Factor 34a, Serine/Arginine-Rich Protein Splicing Factor 34a, SER/ARG-rich protein 34A |
0.81 | 0.32 | -0.31 | ||
21 | AT3G27080 | translocase of outer membrane 20 kDa subunit 3 | translocase of outer membrane 20 kDa subunit 3 |
0.81 | 0.31 | -0.32 | ||
22 | AT3G24740 | Protein of unknown function (DUF1644) | -0.81 | 0.32 | -0.29 | |||
23 | AT1G43710 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
embryo defective 1075 | 0.81 | 0.33 | -0.34 | ||
24 | AT2G47640 | Small nuclear ribonucleoprotein family protein | 0.8 | 0.34 | -0.3 | |||
25 | AT1G22920 | COP9 signalosome 5A | ARABIDOPSIS JAB1 HOMOLOG 1, COP9 signalosome 5A, JAB1 |
0.8 | 0.31 | -0.31 | ||
26 | AT2G34590 | Transketolase family protein | 0.8 | 0.29 | -0.31 | |||
27 | AT1G09630 | RAB GTPase 11C | ARABIDOPSIS RAB GTPASE A2A, RAB GTPase 11C, ARABIDOPSIS RAB GTPASE A2A, RAB GTPASE A2A, RAB GTPase 11C |
0.8 | 0.32 | -0.31 | ||
28 | AT5G35530 | Ribosomal protein S3 family protein | 0.8 | 0.3 | -0.31 | |||
29 | AT4G14960 | Tubulin/FtsZ family protein | TUA6 | 0.8 | 0.34 | -0.31 | ||
30 | AT1G21690 | ATPase family associated with various cellular activities (AAA) |
embryo defective 1968, replication factor C 4 |
0.8 | 0.31 | -0.34 | ||
31 | AT5G52650 | RNA binding Plectin/S10 domain-containing protein | 0.8 | 0.31 | -0.33 | |||
32 | AT2G39900 | GATA type zinc finger transcription factor family protein | WLIM2a | 0.8 | 0.31 | -0.3 | ||
33 | AT5G10400 | Histone superfamily protein | 0.8 | 0.31 | -0.28 | |||
34 | AT3G49910 | Translation protein SH3-like family protein | 0.79 | 0.32 | -0.35 | |||
35 | AT2G30410 | tubulin folding cofactor A (KIESEL) | KIESEL, TUBULIN FOLDING FACTOR A | 0.79 | 0.32 | -0.32 | ||
36 | AT2G36160 | Ribosomal protein S11 family protein | 0.79 | 0.32 | -0.33 | |||
37 | AT5G15350 | early nodulin-like protein 17 | AtENODL17, early nodulin-like protein 17 |
0.79 | 0.31 | -0.33 | ||
38 | AT3G61960 | Protein kinase superfamily protein | -0.79 | 0.31 | -0.32 | |||
39 | AT1G03110 | Transducin/WD40 repeat-like superfamily protein | AtTRM82, tRNA modification 82 | 0.79 | 0.33 | -0.33 | ||
40 | AT3G04920 | Ribosomal protein S24e family protein | 0.78 | 0.29 | -0.3 | |||
41 | AT4G30130 | Protein of unknown function (DUF630 and DUF632) | 0.78 | 0.33 | -0.32 | |||
42 | AT1G04270 | cytosolic ribosomal protein S15 | cytosolic ribosomal protein S15 | 0.78 | 0.3 | -0.32 | ||
43 | AT1G35620 | PDI-like 5-2 | ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 8, PDI-like 5-2, PROTEIN DISULFIDE ISOMERASE 8, PDI-like 5-2 |
0.78 | 0.33 | -0.33 | ||
44 | AT3G08870 | Concanavalin A-like lectin protein kinase family protein | -0.78 | 0.31 | -0.32 | |||
45 | AT5G25080 | Sas10/Utp3/C1D family | 0.78 | 0.31 | -0.31 | |||
46 | AT1G65650 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 | UCH2 | 0.77 | 0.31 | -0.3 | ||
47 | AT3G10730 | SAD1/UNC-84 domain protein 2 | ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2, SAD1/UNC-84 domain protein 2 |
0.77 | 0.31 | -0.31 | ||
48 | AT3G02790 | zinc finger (C2H2 type) family protein | 0.77 | 0.33 | -0.34 | |||
49 | AT4G09800 | S18 ribosomal protein | S18 ribosomal protein | 0.77 | 0.33 | -0.32 | ||
50 | AT3G50110 | PTEN 3 | Arabidopsis thaliana phosphatase and TENsin homolog deleted on chromosome ten 3, PTEN 3, phosphatase and TENsin homolog deleted on chromosome ten 2B |
0.76 | 0.33 | -0.31 | ||
51 | AT5G16480 | Phosphotyrosine protein phosphatases superfamily protein | AtPFA-DSP5, plant and fungi atypical dual-specificity phosphatase 5 |
0.76 | 0.32 | -0.31 | ||
52 | AT1G16920 | RAB GTPase homolog A1B | RAB GTPase homolog A1B, RAB11, RAB GTPase homolog A1B |
0.76 | 0.32 | -0.32 | ||
53 | AT1G27390 | translocase outer membrane 20-2 | translocase outer membrane 20-2 | 0.76 | 0.32 | -0.32 | ||
54 | AT5G07590 | Transducin/WD40 repeat-like superfamily protein | 0.76 | 0.33 | -0.31 | |||
55 | AT1G03290 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast hits to 10183 proteins in 1114 species: Archae - 257; Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675; Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink). |
-0.76 | 0.33 | -0.34 | |||
56 | AT3G14270 | phosphatidylinositol-4-phosphate 5-kinase family protein | FORMS APLOID AND BINUCLEATE CELLS 1B |
-0.76 | 0.31 | -0.31 | ||
57 | AT1G05210 | Transmembrane protein 97, predicted | 0.76 | 0.32 | -0.3 | |||
58 | AT5G16070 | TCP-1/cpn60 chaperonin family protein | 0.76 | 0.31 | -0.32 | |||
59 | AT3G12180 | Cornichon family protein | 0.76 | 0.31 | -0.35 | |||
60 | AT2G32380 | Transmembrane protein 97, predicted | 0.76 | 0.3 | -0.31 | |||
61 | AT1G73980 | Phosphoribulokinase / Uridine kinase family | -0.75 | 0.32 | -0.31 | |||
62 | AT1G50410 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
-0.75 | 0.33 | -0.31 | |||
63 | AT2G03140 | alpha/beta-Hydrolases superfamily protein | -0.74 | 0.31 | -0.3 | |||
64 | AT3G22460 | O-acetylserine (thiol) lyase (OAS-TL) isoform A2 | O-acetylserine (thiol) lyase (OAS-TL) isoform A2 |
-0.74 | 0.32 | -0.3 | ||
65 | AT5G20280 | sucrose phosphate synthase 1F | sucrose phosphate synthase 1F, sucrose phosphate synthase 1F, sucrose-phosphate synthase A1 |
-0.74 | 0.32 | -0.31 | ||
66 | AT1G79610 | Na+/H+ antiporter 6 | ARABIDOPSIS NA+/H+ ANTIPORTER 6, Na+/H+ antiporter 6 |
-0.74 | 0.32 | -0.3 | ||
67 | AT1G66390 | myb domain protein 90 | ATMYB90, myb domain protein 90, PRODUCTION OF ANTHOCYANIN PIGMENT 2 |
-0.73 | 0.34 | -0.3 | ||
68 | AT1G02310 | Glycosyl hydrolase superfamily protein | endo-beta-mannanase 1 | -0.72 | 0.33 | -0.32 | ||
69 | AT5G35560 | DENN (AEX-3) domain-containing protein | -0.72 | 0.3 | -0.31 | |||
70 | AT2G43000 | NAC domain containing protein 42 | NAC domain containing protein 42, NAC domain containing protein 42 |
-0.7 | 0.32 | -0.32 | ||
71 | AT1G36510 | Nucleic acid-binding proteins superfamily | -0.69 | 0.31 | -0.32 | |||
72 | AT1G54160 | nuclear factor Y, subunit A5 | nuclear factor Y, subunit A5, NUCLEAR FACTOR Y A5 |
-0.69 | 0.34 | -0.3 | ||
73 | AT5G02630 | Lung seven transmembrane receptor family protein | -0.68 | 0.33 | -0.3 | |||
74 | AT1G14790 | RNA-dependent RNA polymerase 1 | ATRDRP1, RNA-dependent RNA polymerase 1 |
-0.68 | 0.31 | -0.33 | ||
75 | AT1G77800 | PHD finger family protein | -0.67 | 0.32 | -0.31 | |||
76 | AT5G53890 | phytosylfokine-alpha receptor 2 | AtPSKR2, phytosylfokine-alpha receptor 2 |
-0.67 | 0.31 | -0.3 | ||
77 | AT4G29790 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). |
-0.67 | 0.31 | -0.3 | |||
78 | AT4G04740 | calcium-dependent protein kinase 23 | ATCPK23, calcium-dependent protein kinase 23 |
-0.67 | 0.31 | -0.31 | ||
79 | AT1G24330 | ARM repeat superfamily protein | -0.67 | 0.32 | -0.29 | |||
80 | AT2G31960 | glucan synthase-like 3 | glucan synthase-like 3, ATGSL3, GSL03, glucan synthase-like 3 |
-0.66 | 0.3 | -0.32 | ||
81 | AT2G28290 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
CHROMATIN REMODELING COMPLEX SUBUNIT R 3, SPLAYED |
-0.66 | 0.31 | -0.31 | ||
82 | AT1G78130 | Major facilitator superfamily protein | unfertilized embryo sac 2 | -0.66 | 0.33 | -0.32 | ||
83 | AT2G36960 | TSL-kinase interacting protein 1 | TSL-kinase interacting protein 1 | -0.66 | 0.31 | -0.31 | ||
84 | AT5G50170 | C2 calcium/lipid-binding and GRAM domain containing protein | -0.66 | 0.32 | -0.32 | |||
85 | AT5G65240 | Leucine-rich repeat protein kinase family protein | -0.65 | 0.33 | -0.3 | |||
86 | AT2G27390 | proline-rich family protein | -0.65 | 0.32 | -0.32 | |||
87 | AT1G60940 | SNF1-related protein kinase 2.10 | SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-10, SNF1-related protein kinase 2.10, SNF1-RELATED KINASE 2B |
-0.64 | 0.33 | -0.31 | ||
88 | AT1G51340 | MATE efflux family protein | -0.64 | 0.31 | -0.3 | |||
89 | AT5G58160 | actin binding | -0.64 | 0.33 | -0.33 | |||
90 | AT5G38120 | AMP-dependent synthetase and ligase family protein | 4CL8 | -0.64 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
91 | C0111 | Hexa-2-O-glycerol-β-galactopyranoside | Hexa-2-O-gllycerol-β-D-galactopyranoside | - | - | -0.83 | 0.47 | -0.45 | ||
92 | C0254 | Threonine | D,L-Threonine | L-Threonine | isoleucine biosynthesis I (from threonine), glycine biosynthesis, threonine biosynthesis from homoserine, tRNA charging |
-0.75 | 0.31 | -0.33 | ||
93 | C0264 | Valine | D,L-Valine | L-Valine | jasmonoyl-amino acid conjugates biosynthesis I, pantothenate biosynthesis, IAA degradation V, valine degradation I, valine biosynthesis, tRNA charging, indole-3-acetyl-amino acid biosynthesis |
-0.7 | 0.31 | -0.31 | ||
94 | C0029 | 3-Indolylacetonitrile | - | Indole-3-acetonitrile | indole glucosinolate breakdown (insect chewing induced), IAA biosynthesis I, camalexin biosynthesis |
-0.67 | 0.31 | -0.3 |